RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 FOXA3P55318 350 aaPredicted RBP8.23□□□□□ -1.09
SNX6-207ENST00000556303 CT83Q5H943 113 aa8.23□□□□□ -1.09
SNX6-207ENST00000556303 LINC00269Q8N2A0 174 aa8.23□□□□□ -1.09
SNX6-207ENST00000556303 CLRN3Q8NCR9 226 aa8.23□□□□□ -1.09
SNX6-207ENST00000556303 FAM210AQ96ND0 272 aa8.23□□□□□ -1.09
SNX6-207ENST00000556303 COTL1Q14019 142 aa8.22□□□□□ -1.09
SNX6-207ENST00000556303 CHAC1Q9BUX1 264 aa8.22□□□□□ -1.09
SNX6-207ENST00000556303 FAM231BA6NCW3 169 aa8.21□□□□□ -1.1
SNX6-207ENST00000556303 USP17L23D6RBM5 183 aa8.21□□□□□ -1.1
SNX6-207ENST00000556303 UBE2L6O14933 153 aa8.21□□□□□ -1.1
SNX6-207ENST00000556303 GATCO43716 136 aaKnown RBP8.21□□□□□ -1.1
SNX6-207ENST00000556303 NCR2O95944 276 aa8.21□□□□□ -1.1
SNX6-207ENST00000556303 HAMPP81172 84 aa8.21□□□□□ -1.1
SNX6-207ENST00000556303 REG3AQ06141 175 aa8.21□□□□□ -1.1
SNX6-207ENST00000556303 KRTAP26-1Q6PEX3 210 aa8.21□□□□□ -1.1
SNX6-207ENST00000556303 C20orf203Q8NBC4 194 aa8.21□□□□□ -1.1
SNX6-207ENST00000556303 GTSF1Q8WW33 167 aa8.21□□□□□ -1.1
SNX6-207ENST00000556303 hCG_2014768A0A024R1R8 64 aa8.2□□□□□ -1.1
SNX6-207ENST00000556303 HLA-DQA1P01909 254 aa8.2□□□□□ -1.1
SNX6-207ENST00000556303 GATD1Q8NB37 220 aa8.2□□□□□ -1.1
SNX6-207ENST00000556303 H7C423 109 aa8.19□□□□□ -1.1
SNX6-207ENST00000556303 AMTP48728 403 aa8.19□□□□□ -1.1
SNX6-207ENST00000556303 LCE2CQ5TA81 110 aa8.19□□□□□ -1.1
SNX6-207ENST00000556303 SCXQ7RTU7 201 aa8.19□□□□□ -1.1
SNX6-207ENST00000556303 LINC00528Q8N1L1 170 aa8.19□□□□□ -1.1
SNX6-207ENST00000556303 BORCS7Q96B45 105 aa8.19□□□□□ -1.1
SNX6-207ENST00000556303 EIF5A2Q9GZV4 153 aaKnown RBP8.19□□□□□ -1.1
SNX6-207ENST00000556303 GFRA4Q9GZZ7 299 aa8.19□□□□□ -1.1
SNX6-207ENST00000556303 IGLV4-60A0A075B6I1 120 aa8.18□□□□□ -1.1
SNX6-207ENST00000556303 PRSS1P07477 247 aa8.18□□□□□ -1.1
SNX6-207ENST00000556303 LINC01620Q4KN68 170 aa8.18□□□□□ -1.1
SNX6-207ENST00000556303 LINC01551Q86U37 167 aa8.18□□□□□ -1.1
SNX6-207ENST00000556303 C9orf163Q8N9P6 203 aa8.18□□□□□ -1.1
SNX6-207ENST00000556303 TSKUQ8WUA8 353 aa8.18□□□□□ -1.1
SNX6-207ENST00000556303 CNBPP62633 177 aaKnown RBP8.17□□□□□ -1.1
SNX6-207ENST00000556303 CLPSL2Q6UWE3 100 aa8.17□□□□□ -1.1
SNX6-207ENST00000556303 CIRBP-AS1Q8TBR5 109 aa8.17□□□□□ -1.1
SNX6-207ENST00000556303 DEFB104AQ8WTQ1 72 aa8.17□□□□□ -1.1
SNX6-207ENST00000556303 SMIM7Q9BQ49 75 aa8.17□□□□□ -1.1
SNX6-207ENST00000556303 OSTCQ9NRP0 149 aa8.17□□□□□ -1.1
SNX6-207ENST00000556303 TRAV26-2A0A0B4J265 109 aa8.16□□□□□ -1.1
SNX6-207ENST00000556303 TRBV6-5A0A0K0K1A5 114 aa8.16□□□□□ -1.1
SNX6-207ENST00000556303 A0A1B0GUT8 65 aa8.16□□□□□ -1.1
SNX6-207ENST00000556303 ZNF727A8MUV8 499 aa8.16□□□□□ -1.1
SNX6-207ENST00000556303 CEBPGP53567 150 aa8.16□□□□□ -1.1
SNX6-207ENST00000556303 FAM74A3Q4VXF1 159 aa8.16□□□□□ -1.1
SNX6-207ENST00000556303 TMEM191AQ9H0A3 160 aa8.16□□□□□ -1.1
SNX6-207ENST00000556303 SDHAF1A6NFY7 115 aa8.15□□□□□ -1.1
SNX6-207ENST00000556303 HIGD1CA8MV81 97 aa8.15□□□□□ -1.1
SNX6-207ENST00000556303 APCSP02743 223 aa8.15□□□□□ -1.1
SNX6-207ENST00000556303 CFAP161Q6P656 301 aa8.15□□□□□ -1.1
SNX6-207ENST00000556303 IGLV10-54A0A075B6I4 117 aa8.14□□□□□ -1.11
SNX6-207ENST00000556303 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.14□□□□□ -1.11
SNX6-207ENST00000556303 I3L3M4 83 aa8.14□□□□□ -1.11
SNX6-207ENST00000556303 SRP19P09132 144 aaKnown RBP8.14□□□□□ -1.11
SNX6-207ENST00000556303 ZNF25P17030 456 aaPredicted RBP8.14□□□□□ -1.11
SNX6-207ENST00000556303 AMMECR1LQ6DCA0 310 aa8.14□□□□□ -1.11
SNX6-207ENST00000556303 RPL39LQ96EH5 51 aaKnown RBP8.14□□□□□ -1.11
SNX6-207ENST00000556303 SMDT1Q9H4I9 107 aa8.14□□□□□ -1.11
SNX6-207ENST00000556303 AP5S1Q9NUS5 200 aa8.14□□□□□ -1.11
SNX6-207ENST00000556303 FAT3Q8TDW7 4589 aa8.13□□□□□ -1.11
SNX6-207ENST00000556303 PPP1R17O96001 155 aa8.13□□□□□ -1.11
SNX6-207ENST00000556303 PMCHP20382 165 aa8.13□□□□□ -1.11
SNX6-207ENST00000556303 SDIM1Q6ZPB5 146 aa8.13□□□□□ -1.11
SNX6-207ENST00000556303 MRAP2Q96G30 205 aa8.13□□□□□ -1.11
SNX6-207ENST00000556303 ST20Q9HBF5 79 aa8.13□□□□□ -1.11
SNX6-207ENST00000556303 PKHD1L1Q86WI1 4243 aa8.13□□□□□ -1.11
SNX6-207ENST00000556303 LRP1Q07954 4544 aaKnown RBP8.13□□□□□ -1.11
SNX6-207ENST00000556303 hDV102S1A0JD36 115 aa8.12□□□□□ -1.11
SNX6-207ENST00000556303 KRTAP29-1A8MX34 341 aaPredicted RBP8.12□□□□□ -1.11
SNX6-207ENST00000556303 RIGQ13278 110 aa8.12□□□□□ -1.11
SNX6-207ENST00000556303 TMEM241Q24JQ0 296 aa8.12□□□□□ -1.11
SNX6-207ENST00000556303 TRBV27A0A0K0K1C4 114 aa8.11□□□□□ -1.11
SNX6-207ENST00000556303 FGF6P10767 208 aa8.11□□□□□ -1.11
SNX6-207ENST00000556303 ESDP10768 282 aa8.11□□□□□ -1.11
SNX6-207ENST00000556303 RAB4AP20338 218 aa8.11□□□□□ -1.11
SNX6-207ENST00000556303 POLR2KP53803 58 aaKnown RBP8.11□□□□□ -1.11
SNX6-207ENST00000556303 CIRBPQ14011 172 aaKnown RBP8.11□□□□□ -1.11
SNX6-207ENST00000556303 RNASEKQ6P5S7 137 aaKnown RBP8.11□□□□□ -1.11
SNX6-207ENST00000556303 ISOC2Q96AB3 205 aa8.11□□□□□ -1.11
SNX6-207ENST00000556303 RNF185Q96GF1 192 aa8.11□□□□□ -1.11
SNX6-207ENST00000556303 TMEM101Q96IK0 257 aa8.11□□□□□ -1.11
SNX6-207ENST00000556303 BTF3L4Q96K17 158 aa8.11□□□□□ -1.11
SNX6-207ENST00000556303 V9GYV3 84 aa8.11□□□□□ -1.11
SNX6-207ENST00000556303 IGHV3-64A0A075B6Q5 118 aa8.1□□□□□ -1.11
SNX6-207ENST00000556303 KRTAP10-4P60372 401 aaPredicted RBP8.1□□□□□ -1.11
SNX6-207ENST00000556303 PEA15Q15121 130 aa8.1□□□□□ -1.11
SNX6-207ENST00000556303 OR5A1Q8NGJ0 315 aa8.1□□□□□ -1.11
SNX6-207ENST00000556303 NAT8BQ9UHF3 227 aa8.1□□□□□ -1.11
SNX6-207ENST00000556303 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.09□□□□□ -1.11
SNX6-207ENST00000556303 A0A1B0GW15 77 aa8.09□□□□□ -1.11
SNX6-207ENST00000556303 IGKV2-29A2NJV5 120 aaPredicted RBP8.09□□□□□ -1.11
SNX6-207ENST00000556303 GAGE12HA6NDE8 117 aa8.09□□□□□ -1.11
SNX6-207ENST00000556303 VCYO14598 125 aa8.09□□□□□ -1.11
SNX6-207ENST00000556303 RPL23P62829 140 aaKnown RBP8.09□□□□□ -1.11
SNX6-207ENST00000556303 SMAGPQ0VAQ4 97 aa8.09□□□□□ -1.11
SNX6-207ENST00000556303 C4orf48Q5BLP8 95 aa8.09□□□□□ -1.11
SNX6-207ENST00000556303 MRPL52Q86TS9 123 aaKnown RBP8.09□□□□□ -1.11
SNX6-207ENST00000556303 NUP35Q8NFH5 326 aa8.09□□□□□ -1.11
SNX6-207ENST00000556303 CHCHD10Q8WYQ3 142 aaPredicted RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms