RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 CRPP02741 224 aa5.64□□□□□ -1.51
GTF2A1-204ENST00000556268 FHITP49789 147 aa5.64□□□□□ -1.51
GTF2A1-204ENST00000556268 TMEM97Q5BJF2 176 aa5.64□□□□□ -1.51
GTF2A1-204ENST00000556268 Q5BKY6 102 aa5.64□□□□□ -1.51
GTF2A1-204ENST00000556268 LINC00269Q8N2A0 174 aa5.64□□□□□ -1.51
GTF2A1-204ENST00000556268 RNF185Q96GF1 192 aa5.64□□□□□ -1.51
GTF2A1-204ENST00000556268 KIF25-AS1Q9Y6Z4 181 aa5.64□□□□□ -1.51
GTF2A1-204ENST00000556268 TMSB15BA0A087X1C1 80 aa5.63□□□□□ -1.51
GTF2A1-204ENST00000556268 PTTG1O95997 202 aa5.63□□□□□ -1.51
GTF2A1-204ENST00000556268 CXCL1P09341 107 aa5.63□□□□□ -1.51
GTF2A1-204ENST00000556268 UBE2G2P60604 165 aa5.63□□□□□ -1.51
GTF2A1-204ENST00000556268 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.63□□□□□ -1.51
GTF2A1-204ENST00000556268 FMC1Q96HJ9 113 aa5.63□□□□□ -1.51
GTF2A1-204ENST00000556268 LINC01600Q96MT4 127 aa5.63□□□□□ -1.51
GTF2A1-204ENST00000556268 TCEAL7Q9BRU2 100 aa5.63□□□□□ -1.51
GTF2A1-204ENST00000556268 CHCHD5Q9BSY4 110 aa5.63□□□□□ -1.51
GTF2A1-204ENST00000556268 PLAC8Q9NZF1 115 aa5.63□□□□□ -1.51
GTF2A1-204ENST00000556268 TRAV8-4A0A0B4J246 113 aa5.62□□□□□ -1.51
GTF2A1-204ENST00000556268 SNAI2O43623 268 aa5.62□□□□□ -1.51
GTF2A1-204ENST00000556268 P01737 135 aa5.62□□□□□ -1.51
GTF2A1-204ENST00000556268 HLA-DQA1P01909 254 aa5.62□□□□□ -1.51
GTF2A1-204ENST00000556268 OR5AL1P0C617 328 aa5.62□□□□□ -1.51
GTF2A1-204ENST00000556268 KRTAP10-8P60410 259 aa5.62□□□□□ -1.51
GTF2A1-204ENST00000556268 IQCJQ1A5X6 159 aa5.62□□□□□ -1.51
GTF2A1-204ENST00000556268 RPL7L1Q6DKI1 246 aaKnown RBP5.62□□□□□ -1.51
GTF2A1-204ENST00000556268 OR10AG1Q8NH19 301 aa5.62□□□□□ -1.51
GTF2A1-204ENST00000556268 DERL1Q9BUN8 251 aa5.62□□□□□ -1.51
GTF2A1-204ENST00000556268 CFC1BP0CG36 223 aa5.61□□□□□ -1.51
GTF2A1-204ENST00000556268 CFC1P0CG37 223 aa5.61□□□□□ -1.51
GTF2A1-204ENST00000556268 GZMBP10144 247 aa5.61□□□□□ -1.51
GTF2A1-204ENST00000556268 REG3AQ06141 175 aa5.61□□□□□ -1.51
GTF2A1-204ENST00000556268 GAGE6Q13070 117 aa5.61□□□□□ -1.51
GTF2A1-204ENST00000556268 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.61□□□□□ -1.51
GTF2A1-204ENST00000556268 C20orf203Q8NBC4 194 aa5.61□□□□□ -1.51
GTF2A1-204ENST00000556268 SPACA4Q8TDM5 124 aa5.61□□□□□ -1.51
GTF2A1-204ENST00000556268 ZNF471Q9BX82 626 aaPredicted RBP5.61□□□□□ -1.51
GTF2A1-204ENST00000556268 ALG5Q9Y673 324 aa5.61□□□□□ -1.51
GTF2A1-204ENST00000556268 TRBV25-1A0A075B6N4 114 aa5.6□□□□□ -1.51
GTF2A1-204ENST00000556268 IGHV3-64A0A075B6Q5 118 aa5.6□□□□□ -1.51
GTF2A1-204ENST00000556268 M0QY20 66 aa5.6□□□□□ -1.51
GTF2A1-204ENST00000556268 S100A9P06702 114 aaKnown RBP5.6□□□□□ -1.51
GTF2A1-204ENST00000556268 DEFA1P59665 94 aa5.6□□□□□ -1.51
GTF2A1-204ENST00000556268 DEFA3P59666 94 aa5.6□□□□□ -1.51
GTF2A1-204ENST00000556268 DPH3Q96FX2 82 aa5.6□□□□□ -1.51
GTF2A1-204ENST00000556268 BORCS7-ASMTA0A0B4J1R7 106 aa5.59□□□□□ -1.51
GTF2A1-204ENST00000556268 VCYO14598 125 aa5.59□□□□□ -1.51
GTF2A1-204ENST00000556268 CHTF8P0CG12 524 aa5.59□□□□□ -1.51
GTF2A1-204ENST00000556268 UBE2G1P62253 170 aa5.59□□□□□ -1.51
GTF2A1-204ENST00000556268 ZNF56Q15929 161 aa5.59□□□□□ -1.51
GTF2A1-204ENST00000556268 INO80EQ8NBZ0 244 aaPredicted RBP5.59□□□□□ -1.51
GTF2A1-204ENST00000556268 CYTL1Q9NRR1 136 aa5.59□□□□□ -1.51
GTF2A1-204ENST00000556268 IGLV4-60A0A075B6I1 120 aa5.58□□□□□ -1.52
GTF2A1-204ENST00000556268 IGLV10-54A0A075B6I4 117 aa5.58□□□□□ -1.52
GTF2A1-204ENST00000556268 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.58□□□□□ -1.52
GTF2A1-204ENST00000556268 IGHV1-24A0A0C4DH33 117 aa5.58□□□□□ -1.52
GTF2A1-204ENST00000556268 PHOX2AO14813 284 aa5.58□□□□□ -1.52
GTF2A1-204ENST00000556268 AKR1C8PQ5T2L2 129 aa5.58□□□□□ -1.52
GTF2A1-204ENST00000556268 SPANXN1Q5VSR9 72 aa5.58□□□□□ -1.52
GTF2A1-204ENST00000556268 CST9LP1Q5W188 147 aa5.58□□□□□ -1.52
GTF2A1-204ENST00000556268 CLPSL2Q6UWE3 100 aa5.58□□□□□ -1.52
GTF2A1-204ENST00000556268 BAGE2Q86Y30 109 aa5.58□□□□□ -1.52
GTF2A1-204ENST00000556268 GFRA4Q9GZZ7 299 aa5.58□□□□□ -1.52
GTF2A1-204ENST00000556268 MUC21A0A0G2JKD1 596 aa5.57□□□□□ -1.52
GTF2A1-204ENST00000556268 A0A0J9YXV3 536 aa5.57□□□□□ -1.52
GTF2A1-204ENST00000556268 MUC21A0A140T8X8 626 aa5.57□□□□□ -1.52
GTF2A1-204ENST00000556268 MAP1LC3B2A6NCE7 125 aa5.57□□□□□ -1.52
GTF2A1-204ENST00000556268 GIPP09681 153 aaPredicted RBP5.57□□□□□ -1.52
GTF2A1-204ENST00000556268 LINC01547P58512 204 aaPredicted RBP5.57□□□□□ -1.52
GTF2A1-204ENST00000556268 COX6A2Q02221 97 aa5.57□□□□□ -1.52
GTF2A1-204ENST00000556268 SRSF9Q13242 221 aaKnown RBP eCLIP5.57□□□□□ -1.52
GTF2A1-204ENST00000556268 STOML3Q8TAV4 291 aa5.57□□□□□ -1.52
GTF2A1-204ENST00000556268 MBD3L1Q8WWY6 194 aa5.57□□□□□ -1.52
GTF2A1-204ENST00000556268 MAP1LC3BQ9GZQ8 125 aa5.57□□□□□ -1.52
GTF2A1-204ENST00000556268 MED28Q9H204 178 aa5.57□□□□□ -1.52
GTF2A1-204ENST00000556268 G3V3Q6 166 aa5.56□□□□□ -1.52
GTF2A1-204ENST00000556268 PAGE4O60829 102 aa5.56□□□□□ -1.52
GTF2A1-204ENST00000556268 AKR1C3P42330 323 aa5.56□□□□□ -1.52
GTF2A1-204ENST00000556268 RPS10P46783 165 aaKnown RBP5.56□□□□□ -1.52
GTF2A1-204ENST00000556268 TMUB2Q71RG4 321 aa5.56□□□□□ -1.52
GTF2A1-204ENST00000556268 C15orf56Q8N910 161 aa5.56□□□□□ -1.52
GTF2A1-204ENST00000556268 C7orf33Q8WU49 177 aa5.56□□□□□ -1.52
GTF2A1-204ENST00000556268 PGLYRP4Q96LB8 373 aa5.56□□□□□ -1.52
GTF2A1-204ENST00000556268 H7C1H1 209 aa5.55□□□□□ -1.52
GTF2A1-204ENST00000556268 NDUFS6O75380 124 aaKnown RBP5.55□□□□□ -1.52
GTF2A1-204ENST00000556268 IGLC6P0CF74 106 aa5.55□□□□□ -1.52
GTF2A1-204ENST00000556268 SMIM17P0DL12 118 aa5.55□□□□□ -1.52
GTF2A1-204ENST00000556268 RAB5CP51148 216 aa5.55□□□□□ -1.52
GTF2A1-204ENST00000556268 SSTP61278 116 aa5.55□□□□□ -1.52
GTF2A1-204ENST00000556268 PRR3P79522 188 aaKnown RBP5.55□□□□□ -1.52
GTF2A1-204ENST00000556268 CFAP161Q6P656 301 aa5.55□□□□□ -1.52
GTF2A1-204ENST00000556268 SPINK6Q6UWN8 80 aa5.55□□□□□ -1.52
GTF2A1-204ENST00000556268 TMEM243Q9BU79 118 aa5.55□□□□□ -1.52
GTF2A1-204ENST00000556268 DPH3P1Q9H4G8 78 aa5.55□□□□□ -1.52
GTF2A1-204ENST00000556268 GTSF1Q8WW33 167 aa5.54□□□□□ -1.52
GTF2A1-204ENST00000556268 AP1S3Q96PC3 154 aa5.54□□□□□ -1.52
GTF2A1-204ENST00000556268 NIT2Q9NQR4 276 aa5.54□□□□□ -1.52
GTF2A1-204ENST00000556268 LPAP08519 4548 aa5.53□□□□□ -1.52
GTF2A1-204ENST00000556268 FXYD6-FXYD2A0A087WZ82 144 aa5.53□□□□□ -1.52
GTF2A1-204ENST00000556268 NKX2-5P52952 324 aaPredicted RBP5.53□□□□□ -1.52
GTF2A1-204ENST00000556268 CACNG7P62955 275 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms