RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 RAB5AP20339 215 aa5.24□□□□□ -1.57
TDP1-214ENST00000556063 FCER1GP30273 86 aa5.24□□□□□ -1.57
TDP1-214ENST00000556063 AMTP48728 403 aa5.24□□□□□ -1.57
TDP1-214ENST00000556063 POLR2KP53803 58 aaKnown RBP5.24□□□□□ -1.57
TDP1-214ENST00000556063 IQCJQ1A5X6 159 aa5.24□□□□□ -1.57
TDP1-214ENST00000556063 C10orf126Q8N4M7 172 aa5.24□□□□□ -1.57
TDP1-214ENST00000556063 CHCHD5Q9BSY4 110 aa5.24□□□□□ -1.57
TDP1-214ENST00000556063 TMEM243Q9BU79 118 aa5.24□□□□□ -1.57
TDP1-214ENST00000556063 MAP1LC3AQ9H492 121 aa5.24□□□□□ -1.57
TDP1-214ENST00000556063 TMEM262E9PQX1 116 aa5.23□□□□□ -1.57
TDP1-214ENST00000556063 UBE2L6O14933 153 aa5.23□□□□□ -1.57
TDP1-214ENST00000556063 GAS8-AS1O95177 125 aa5.23□□□□□ -1.57
TDP1-214ENST00000556063 NPYP01303 97 aa5.23□□□□□ -1.57
TDP1-214ENST00000556063 DNAH10OSP0CZ25 163 aa5.23□□□□□ -1.57
TDP1-214ENST00000556063 SMAGPQ0VAQ4 97 aa5.23□□□□□ -1.57
TDP1-214ENST00000556063 KIAA1644Q3SXP7 199 aa5.23□□□□□ -1.57
TDP1-214ENST00000556063 LCE3BQ5TA77 95 aa5.23□□□□□ -1.57
TDP1-214ENST00000556063 WFDC10BQ8IUB3 73 aa5.23□□□□□ -1.57
TDP1-214ENST00000556063 YPEL4Q96NS1 127 aa5.23□□□□□ -1.57
TDP1-214ENST00000556063 CHCHD7Q9BUK0 85 aa5.23□□□□□ -1.57
TDP1-214ENST00000556063 SMIM2Q9BVW6 85 aa5.23□□□□□ -1.57
TDP1-214ENST00000556063 IGLV2-18A0A075B6J9 118 aa5.22□□□□□ -1.57
TDP1-214ENST00000556063 NBDYA0A0U1RRE5 68 aa5.22□□□□□ -1.57
TDP1-214ENST00000556063 PRSS47A8MTI9 375 aa5.22□□□□□ -1.57
TDP1-214ENST00000556063 H7C423 109 aa5.22□□□□□ -1.57
TDP1-214ENST00000556063 K7EMI3 77 aa5.22□□□□□ -1.57
TDP1-214ENST00000556063 G0S2P27469 103 aa5.22□□□□□ -1.57
TDP1-214ENST00000556063 LINC01556Q5JQF7 62 aa5.22□□□□□ -1.57
TDP1-214ENST00000556063 NTM-AS1Q6ZSK4 140 aa5.22□□□□□ -1.57
TDP1-214ENST00000556063 NIT1Q86X76 327 aa5.22□□□□□ -1.57
TDP1-214ENST00000556063 TMEM18Q96B42 140 aa5.22□□□□□ -1.57
TDP1-214ENST00000556063 NXT2Q9NPJ8 142 aaKnown RBP5.22□□□□□ -1.57
TDP1-214ENST00000556063 LOC389332A0A1B0GUA5 103 aa5.21□□□□□ -1.58
TDP1-214ENST00000556063 BTF3P20290 206 aaKnown RBP5.21□□□□□ -1.58
TDP1-214ENST00000556063 GAGE6Q13070 117 aa5.21□□□□□ -1.58
TDP1-214ENST00000556063 AMMECR1LQ6DCA0 310 aa5.21□□□□□ -1.58
TDP1-214ENST00000556063 Q8N8P6 123 aa5.21□□□□□ -1.58
TDP1-214ENST00000556063 PRSS3P2Q8NHM4 247 aa5.21□□□□□ -1.58
TDP1-214ENST00000556063 ALKBH7Q9BT30 221 aaPredicted RBP5.21□□□□□ -1.58
TDP1-214ENST00000556063 KRTAP9-9Q9BYP9 154 aa5.21□□□□□ -1.58
TDP1-214ENST00000556063 KRTAP9-4Q9BYQ2 154 aa5.21□□□□□ -1.58
TDP1-214ENST00000556063 KRTAP4-8A0A0G2JLE6 195 aa5.2□□□□□ -1.58
TDP1-214ENST00000556063 COLCA2A8K830 154 aa5.2□□□□□ -1.58
TDP1-214ENST00000556063 M0R2N4 97 aa5.2□□□□□ -1.58
TDP1-214ENST00000556063 SCO1O75880 301 aa5.2□□□□□ -1.58
TDP1-214ENST00000556063 TSHBP01222 138 aa5.2□□□□□ -1.58
TDP1-214ENST00000556063 IGHV3-30P01768 117 aa5.2□□□□□ -1.58
TDP1-214ENST00000556063 IGHV3-33P01772 117 aa5.2□□□□□ -1.58
TDP1-214ENST00000556063 IGHV3-30-3P0DP02 117 aa5.2□□□□□ -1.58
TDP1-214ENST00000556063 IGHV3-30-5P0DP03 117 aa5.2□□□□□ -1.58
TDP1-214ENST00000556063 ORMDL2Q53FV1 153 aa5.2□□□□□ -1.58
TDP1-214ENST00000556063 DGAT2L7PQ6IED9 249 aa5.2□□□□□ -1.58
TDP1-214ENST00000556063 DEFB104AQ8WTQ1 72 aa5.2□□□□□ -1.58
TDP1-214ENST00000556063 TMEM101Q96IK0 257 aa5.2□□□□□ -1.58
TDP1-214ENST00000556063 TRAV8-3A0A0A6YYJ7 113 aa5.19□□□□□ -1.58
TDP1-214ENST00000556063 A0A1B0GUV1 79 aa5.19□□□□□ -1.58
TDP1-214ENST00000556063 ANGP03950 147 aaKnown RBP5.19□□□□□ -1.58
TDP1-214ENST00000556063 ESDP10768 282 aa5.19□□□□□ -1.58
TDP1-214ENST00000556063 ZNF25P17030 456 aaPredicted RBP5.19□□□□□ -1.58
TDP1-214ENST00000556063 RAB5BP61020 215 aa5.19□□□□□ -1.58
TDP1-214ENST00000556063 RBX1P62877 108 aa5.19□□□□□ -1.58
TDP1-214ENST00000556063 LAGE3Q14657 143 aa5.19□□□□□ -1.58
TDP1-214ENST00000556063 RNASEKQ6P5S7 137 aaKnown RBP5.19□□□□□ -1.58
TDP1-214ENST00000556063 Q6ZR54 194 aa5.19□□□□□ -1.58
TDP1-214ENST00000556063 FA2HQ7L5A8 372 aa5.19□□□□□ -1.58
TDP1-214ENST00000556063 NFE4Q86UQ8 179 aa5.19□□□□□ -1.58
TDP1-214ENST00000556063 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.18□□□□□ -1.58
TDP1-214ENST00000556063 IGKV2-29A2NJV5 120 aaPredicted RBP5.18□□□□□ -1.58
TDP1-214ENST00000556063 LINC01549A6NIU2 74 aa5.18□□□□□ -1.58
TDP1-214ENST00000556063 IBA57-AS1B1ANH7 110 aa5.18□□□□□ -1.58
TDP1-214ENST00000556063 CRPP02741 224 aa5.18□□□□□ -1.58
TDP1-214ENST00000556063 TRGC2P03986 189 aa5.18□□□□□ -1.58
TDP1-214ENST00000556063 FGF6P10767 208 aa5.18□□□□□ -1.58
TDP1-214ENST00000556063 IFI27P40305 119 aaPredicted RBP5.18□□□□□ -1.58
TDP1-214ENST00000556063 Q0VG73 95 aa5.18□□□□□ -1.58
TDP1-214ENST00000556063 MPV17L2Q567V2 206 aa5.18□□□□□ -1.58
TDP1-214ENST00000556063 C1orf134Q5TEV5 83 aa5.18□□□□□ -1.58
TDP1-214ENST00000556063 C6orf223Q8N319 242 aa5.18□□□□□ -1.58
TDP1-214ENST00000556063 C20orf203Q8NBC4 194 aa5.18□□□□□ -1.58
TDP1-214ENST00000556063 OR5A1Q8NGJ0 315 aa5.18□□□□□ -1.58
TDP1-214ENST00000556063 RMI2Q96E14 147 aa5.18□□□□□ -1.58
TDP1-214ENST00000556063 KLK12Q9UKR0 248 aa5.18□□□□□ -1.58
TDP1-214ENST00000556063 MRPL52Q86TS9 123 aaKnown RBP5.17□□□□□ -1.58
TDP1-214ENST00000556063 Q8N976 141 aa5.17□□□□□ -1.58
TDP1-214ENST00000556063 C18orf32Q8TCD1 76 aa5.17□□□□□ -1.58
TDP1-214ENST00000556063 UBE2WQ96B02 151 aa5.17□□□□□ -1.58
TDP1-214ENST00000556063 TIMM21Q9BVV7 248 aa5.17□□□□□ -1.58
TDP1-214ENST00000556063 TM2D2Q9BX73 214 aa5.17□□□□□ -1.58
TDP1-214ENST00000556063 SPANXA1Q9NS26 97 aa5.17□□□□□ -1.58
TDP1-214ENST00000556063 AP5S1Q9NUS5 200 aa5.17□□□□□ -1.58
TDP1-214ENST00000556063 CYSLTR1Q9Y271 337 aa5.17□□□□□ -1.58
TDP1-214ENST00000556063 CSDC2Q9Y534 153 aaKnown RBP5.17□□□□□ -1.58
TDP1-214ENST00000556063 COX11Q9Y6N1 276 aa5.17□□□□□ -1.58
TDP1-214ENST00000556063 LINC00614P0C842 121 aa5.16□□□□□ -1.58
TDP1-214ENST00000556063 MIAQ16674 131 aa5.16□□□□□ -1.58
TDP1-214ENST00000556063 BAGE3Q86Y29 109 aa5.16□□□□□ -1.58
TDP1-214ENST00000556063 DNAH7Q8WXX0 4024 aa5.15□□□□□ -1.58
TDP1-214ENST00000556063 CSMD3Q7Z407 3707 aa5.15□□□□□ -1.58
TDP1-214ENST00000556063 IGLV4-60A0A075B6I1 120 aa5.15□□□□□ -1.59
TDP1-214ENST00000556063 TRAV8-4A0A0B4J246 113 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 136.7 ms