RNA–Protein interactions for RNA: ENST00000555953.1

SCFD1-217, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-217ENST00000555953 PROK2Q9HC23 129 aa0.27□□□□□ -2.37
SCFD1-217ENST00000555953 NDUFA4L2Q9NRX3 87 aa0.27□□□□□ -2.37
SCFD1-217ENST00000555953 PZPP20742 1482 aa0.27□□□□□ -2.37
SCFD1-217ENST00000555953 PIEZO1Q92508 2521 aa0.27□□□□□ -2.37
SCFD1-217ENST00000555953 ATP6V1G2-DDX39BF2Z307 99 aa0.26□□□□□ -2.37
SCFD1-217ENST00000555953 M0R135 149 aa0.26□□□□□ -2.37
SCFD1-217ENST00000555953 TPPP2P59282 170 aa0.26□□□□□ -2.37
SCFD1-217ENST00000555953 PPP3R1P63098 170 aa0.26□□□□□ -2.37
SCFD1-217ENST00000555953 C5orf38Q86SI9 138 aa0.26□□□□□ -2.37
SCFD1-217ENST00000555953 C14orf144Q96I85 54 aa0.26□□□□□ -2.37
SCFD1-217ENST00000555953 DOCK1Q14185 1865 aa0.26□□□□□ -2.37
SCFD1-217ENST00000555953 TPRP12270 2363 aaKnown RBP0.26□□□□□ -2.37
SCFD1-217ENST00000555953 ZNF236Q9UL36 1845 aa0.25□□□□□ -2.37
SCFD1-217ENST00000555953 SIPA1L3O60292 1781 aaPredicted RBP0.25□□□□□ -2.37
SCFD1-217ENST00000555953 PPIP5K1Q6PFW1 1433 aa0.25□□□□□ -2.37
SCFD1-217ENST00000555953 TNFP01375 233 aa0.25□□□□□ -2.37
SCFD1-217ENST00000555953 HAMPP81172 84 aa0.25□□□□□ -2.37
SCFD1-217ENST00000555953 SPAG11BQ08648 103 aa0.25□□□□□ -2.37
SCFD1-217ENST00000555953 CFAP126Q5VTH2 177 aa0.25□□□□□ -2.37
SCFD1-217ENST00000555953 Q5VV11 94 aa0.25□□□□□ -2.37
SCFD1-217ENST00000555953 C12orf73Q69YU5 71 aa0.25□□□□□ -2.37
SCFD1-217ENST00000555953 SPAG11AQ6PDA7 123 aa0.25□□□□□ -2.37
SCFD1-217ENST00000555953 SFTA2Q6UW10 78 aa0.25□□□□□ -2.37
SCFD1-217ENST00000555953 SPINK6Q6UWN8 80 aa0.25□□□□□ -2.37
SCFD1-217ENST00000555953 SSBP3-AS1Q7Z2R9 100 aa0.25□□□□□ -2.37
SCFD1-217ENST00000555953 COMMD6Q7Z4G1 85 aa0.25□□□□□ -2.37
SCFD1-217ENST00000555953 COPS9Q8WXC6 57 aa0.25□□□□□ -2.37
SCFD1-217ENST00000555953 PPP3R2Q96LZ3 170 aa0.25□□□□□ -2.37
SCFD1-217ENST00000555953 PRR15LQ9BU68 103 aa0.25□□□□□ -2.37
SCFD1-217ENST00000555953 LINC00472Q9H8W2 130 aa0.25□□□□□ -2.37
SCFD1-217ENST00000555953 PTPRZ1P23471 2315 aaPredicted RBP0.25□□□□□ -2.37
SCFD1-217ENST00000555953 MYO7AQ13402 2215 aa0.25□□□□□ -2.37
SCFD1-217ENST00000555953 SYNE1Q8NF91 8797 aaKnown RBP0.25□□□□□ -2.37
SCFD1-217ENST00000555953 SHROOM2Q13796 1616 aa0.24□□□□□ -2.37
SCFD1-217ENST00000555953 PEG3Q9GZU2 1588 aa0.24□□□□□ -2.37
SCFD1-217ENST00000555953 TRBV7-3A0A075B6L6 115 aa0.24□□□□□ -2.37
SCFD1-217ENST00000555953 HMGN4O00479 90 aa0.24□□□□□ -2.37
SCFD1-217ENST00000555953 GCHFRP30047 84 aa0.24□□□□□ -2.37
SCFD1-217ENST00000555953 GNG4P50150 75 aa0.24□□□□□ -2.37
SCFD1-217ENST00000555953 AQP10Q96PS8 301 aa0.24□□□□□ -2.37
SCFD1-217ENST00000555953 AMELXQ99217 191 aa0.24□□□□□ -2.37
SCFD1-217ENST00000555953 MAST4O15021 2626 aa0.24□□□□□ -2.37
SCFD1-217ENST00000555953 IFT172Q9UG01 1749 aa0.24□□□□□ -2.37
SCFD1-217ENST00000555953 LAMC1P11047 1609 aa0.24□□□□□ -2.37
SCFD1-217ENST00000555953 POLQO75417 2590 aa0.23□□□□□ -2.37
SCFD1-217ENST00000555953 ABCA12Q86UK0 2595 aa0.23□□□□□ -2.37
SCFD1-217ENST00000555953 NAIPQ13075 1403 aa0.23□□□□□ -2.37
SCFD1-217ENST00000555953 C10orf71Q711Q0 1435 aa0.23□□□□□ -2.37
SCFD1-217ENST00000555953 SMG6Q86US8 1419 aaKnown RBP0.23□□□□□ -2.37
SCFD1-217ENST00000555953 ZFYVE26Q68DK2 2539 aa0.23□□□□□ -2.37
SCFD1-217ENST00000555953 KTN1Q86UP2 1357 aaKnown RBP0.23□□□□□ -2.37
SCFD1-217ENST00000555953 ZNF815PA8K554 130 aa0.23□□□□□ -2.37
SCFD1-217ENST00000555953 SNCAP37840 140 aa0.23□□□□□ -2.37
SCFD1-217ENST00000555953 BAGE3Q86Y29 109 aa0.23□□□□□ -2.37
SCFD1-217ENST00000555953 C8orf59Q8N0T1 100 aaPredicted RBP0.23□□□□□ -2.37
SCFD1-217ENST00000555953 TMEM203Q969S6 136 aa0.23□□□□□ -2.37
SCFD1-217ENST00000555953 C12orf57Q99622 126 aa0.23□□□□□ -2.37
SCFD1-217ENST00000555953 IER3IP1Q9Y5U9 82 aa0.23□□□□□ -2.37
SCFD1-217ENST00000555953 V9GYH0 126 aa0.23□□□□□ -2.37
SCFD1-217ENST00000555953 FAT4Q6V0I7 4981 aa0.23□□□□□ -2.37
SCFD1-217ENST00000555953 MYH7P12883 1935 aa0.23□□□□□ -2.37
SCFD1-217ENST00000555953 SCAPERQ9BY12 1400 aa0.22□□□□□ -2.37
SCFD1-217ENST00000555953 PRDM2Q13029 1718 aa0.22□□□□□ -2.37
SCFD1-217ENST00000555953 CTXND1A0A1B0GTU2 59 aa0.22□□□□□ -2.37
SCFD1-217ENST00000555953 IGLC7A0M8Q6 106 aa0.22□□□□□ -2.37
SCFD1-217ENST00000555953 CHKB-CPT1BH3BT56 60 aa0.22□□□□□ -2.37
SCFD1-217ENST00000555953 BCE1O60756 84 aa0.22□□□□□ -2.37
SCFD1-217ENST00000555953 SPINK8P0C7L1 97 aa0.22□□□□□ -2.37
SCFD1-217ENST00000555953 IFITM1P13164 125 aa0.22□□□□□ -2.37
SCFD1-217ENST00000555953 NPVFQ9HCQ7 196 aa0.22□□□□□ -2.37
SCFD1-217ENST00000555953 LENEPQ9Y5L5 61 aa0.22□□□□□ -2.37
SCFD1-217ENST00000555953 LRRC37A3O60309 1634 aa0.22□□□□□ -2.37
SCFD1-217ENST00000555953 CC2D2AQ9P2K1 1620 aa0.22□□□□□ -2.37
SCFD1-217ENST00000555953 ARHGEF5Q12774 1597 aa0.22□□□□□ -2.37
SCFD1-217ENST00000555953 PATJQ8NI35 1801 aa0.22□□□□□ -2.37
SCFD1-217ENST00000555953 ANK2Q01484 3957 aa0.21□□□□□ -2.38
SCFD1-217ENST00000555953 NWD2Q9ULI1 1742 aa0.21□□□□□ -2.38
SCFD1-217ENST00000555953 CADP27708 2225 aa0.21□□□□□ -2.38
SCFD1-217ENST00000555953 TRAV22A0A0B4J277 110 aa0.21□□□□□ -2.38
SCFD1-217ENST00000555953 UBE2L5PA0A1B0GUS4 154 aa0.21□□□□□ -2.38
SCFD1-217ENST00000555953 C20orf202A1L168 122 aa0.21□□□□□ -2.38
SCFD1-217ENST00000555953 GNG11P61952 73 aa0.21□□□□□ -2.38
SCFD1-217ENST00000555953 UBE2L3P68036 154 aaKnown RBP0.21□□□□□ -2.38
SCFD1-217ENST00000555953 HSD52Q0P140 79 aa0.21□□□□□ -2.38
SCFD1-217ENST00000555953 SVBPQ8N300 66 aa0.21□□□□□ -2.38
SCFD1-217ENST00000555953 MGST2Q99735 147 aa0.21□□□□□ -2.38
SCFD1-217ENST00000555953 CYP4F30PQ9H0H9 118 aa0.21□□□□□ -2.38
SCFD1-217ENST00000555953 R4GMQ9 66 aa0.21□□□□□ -2.38
SCFD1-217ENST00000555953 PXDNQ92626 1479 aa0.21□□□□□ -2.38
SCFD1-217ENST00000555953 hADV29S1A0JD25 119 aa0.2□□□□□ -2.38
SCFD1-217ENST00000555953 FAM24AA6NFZ4 105 aa0.2□□□□□ -2.38
SCFD1-217ENST00000555953 F8VRH5 84 aa0.2□□□□□ -2.38
SCFD1-217ENST00000555953 M0R3E3 92 aa0.2□□□□□ -2.38
SCFD1-217ENST00000555953 SSSCA1O60232 199 aa0.2□□□□□ -2.38
SCFD1-217ENST00000555953 S100PP25815 95 aa0.2□□□□□ -2.38
SCFD1-217ENST00000555953 Q0VG73 95 aa0.2□□□□□ -2.38
SCFD1-217ENST00000555953 UBE2DNLQ8IWF7 75 aa0.2□□□□□ -2.38
SCFD1-217ENST00000555953 MYOZ3Q8TDC0 251 aa0.2□□□□□ -2.38
SCFD1-217ENST00000555953 DYNLRB1Q9NP97 96 aa0.2□□□□□ -2.38
SCFD1-217ENST00000555953 CDC42SE2Q9NRR3 84 aa0.2□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms