RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 MED9Q9NWA0 146 aa12.66□□□□□ -0.38
PRKCH-219ENST00000555906 PANO1I0J062 215 aa12.65□□□□□ -0.38
PRKCH-219ENST00000555906 NTF3P20783 257 aa12.65□□□□□ -0.38
PRKCH-219ENST00000555906 CIRBPQ14011 172 aaKnown RBP12.65□□□□□ -0.38
PRKCH-219ENST00000555906 WDR73Q6P4I2 378 aa12.65□□□□□ -0.38
PRKCH-219ENST00000555906 C9orf62Q8N4C0 152 aa12.65□□□□□ -0.38
PRKCH-219ENST00000555906 GFRA4Q9GZZ7 299 aa12.65□□□□□ -0.38
PRKCH-219ENST00000555906 hDV102S1A0JD36 115 aa12.64□□□□□ -0.39
PRKCH-219ENST00000555906 UBE2L6O14933 153 aa12.64□□□□□ -0.39
PRKCH-219ENST00000555906 COTL1Q14019 142 aa12.64□□□□□ -0.39
PRKCH-219ENST00000555906 TAGLN2P37802 199 aaKnown RBP12.63□□□□□ -0.39
PRKCH-219ENST00000555906 AMTP48728 403 aa12.63□□□□□ -0.39
PRKCH-219ENST00000555906 HNRNPA3P51991 378 aaKnown RBP12.63□□□□□ -0.39
PRKCH-219ENST00000555906 NUDT10Q8NFP7 164 aa12.62□□□□□ -0.39
PRKCH-219ENST00000555906 NUDT11Q96G61 164 aa12.62□□□□□ -0.39
PRKCH-219ENST00000555906 AP5S1Q9NUS5 200 aa12.62□□□□□ -0.39
PRKCH-219ENST00000555906 IGHV3-64A0A075B6Q5 118 aa12.61□□□□□ -0.39
PRKCH-219ENST00000555906 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.61□□□□□ -0.39
PRKCH-219ENST00000555906 TCTE3Q8IZS6 198 aa12.61□□□□□ -0.39
PRKCH-219ENST00000555906 RPP21Q9H633 154 aaKnown RBP12.61□□□□□ -0.39
PRKCH-219ENST00000555906 TWIST1Q15672 202 aa12.6□□□□□ -0.39
PRKCH-219ENST00000555906 SLC51BQ86UW2 128 aa12.6□□□□□ -0.39
PRKCH-219ENST00000555906 GATD1Q8NB37 220 aa12.59□□□□□ -0.39
PRKCH-219ENST00000555906 RNF185Q96GF1 192 aa12.59□□□□□ -0.39
PRKCH-219ENST00000555906 K7EN84 100 aa12.58□□□□□ -0.4
PRKCH-219ENST00000555906 RNASE7Q9H1E1 156 aaKnown RBP12.58□□□□□ -0.4
PRKCH-219ENST00000555906 TRAV26-2A0A0B4J265 109 aa12.57□□□□□ -0.4
PRKCH-219ENST00000555906 SLPIP03973 132 aa12.57□□□□□ -0.4
PRKCH-219ENST00000555906 C15orf56Q8N910 161 aa12.57□□□□□ -0.4
PRKCH-219ENST00000555906 SPACA4Q8TDM5 124 aa12.57□□□□□ -0.4
PRKCH-219ENST00000555906 NCR2O95944 276 aa12.56□□□□□ -0.4
PRKCH-219ENST00000555906 GAGE12HA6NDE8 117 aa12.55□□□□□ -0.4
PRKCH-219ENST00000555906 CFAP161Q6P656 301 aa12.55□□□□□ -0.4
PRKCH-219ENST00000555906 OCC1Q8TAD7 63 aa12.55□□□□□ -0.4
PRKCH-219ENST00000555906 GTSF1Q8WW33 167 aa12.55□□□□□ -0.4
PRKCH-219ENST00000555906 CHTF8P0CG12 524 aa12.54□□□□□ -0.4
PRKCH-219ENST00000555906 Q6ZNX1 250 aa12.54□□□□□ -0.4
PRKCH-219ENST00000555906 SMIM15Q7Z3B0 74 aa12.54□□□□□ -0.4
PRKCH-219ENST00000555906 RPL39LQ96EH5 51 aaKnown RBP12.54□□□□□ -0.4
PRKCH-219ENST00000555906 PLA2G2DQ9UNK4 145 aa12.54□□□□□ -0.4
PRKCH-219ENST00000555906 A0A087WYN8 130 aa12.53□□□□□ -0.4
PRKCH-219ENST00000555906 H7C423 109 aa12.53□□□□□ -0.4
PRKCH-219ENST00000555906 APCSP02743 223 aa12.53□□□□□ -0.4
PRKCH-219ENST00000555906 AMMECR1LQ6DCA0 310 aa12.53□□□□□ -0.4
PRKCH-219ENST00000555906 TEX261Q6UWH6 196 aa12.53□□□□□ -0.4
PRKCH-219ENST00000555906 Q6ZRU5 148 aa12.53□□□□□ -0.4
PRKCH-219ENST00000555906 IGKV3OR2-268A0A0C4DH90 116 aa12.52□□□□□ -0.41
PRKCH-219ENST00000555906 TMEM250H0YL14 139 aa12.52□□□□□ -0.41
PRKCH-219ENST00000555906 UBR4Q5T4S7 5183 aa12.51□□□□□ -0.41
PRKCH-219ENST00000555906 FAM231DQ6ZW35 169 aa12.51□□□□□ -0.41
PRKCH-219ENST00000555906 CHCHD10Q8WYQ3 142 aaPredicted RBP12.51□□□□□ -0.41
PRKCH-219ENST00000555906 PLAC8Q9NZF1 115 aa12.51□□□□□ -0.41
PRKCH-219ENST00000555906 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.5□□□□□ -0.41
PRKCH-219ENST00000555906 GVQW2A0A096LPI5 108 aaPredicted RBP12.5□□□□□ -0.41
PRKCH-219ENST00000555906 IGKV2-29A2NJV5 120 aaPredicted RBP12.5□□□□□ -0.41
PRKCH-219ENST00000555906 SDHAF1A6NFY7 115 aa12.5□□□□□ -0.41
PRKCH-219ENST00000555906 ZNF25P17030 456 aaPredicted RBP12.5□□□□□ -0.41
PRKCH-219ENST00000555906 RNASEKQ6P5S7 137 aaKnown RBP12.5□□□□□ -0.41
PRKCH-219ENST00000555906 GATCO43716 136 aaKnown RBP12.49□□□□□ -0.41
PRKCH-219ENST00000555906 MT1HL1P0DM35 61 aa12.49□□□□□ -0.41
PRKCH-219ENST00000555906 FGF6P10767 208 aa12.49□□□□□ -0.41
PRKCH-219ENST00000555906 RPS10P46783 165 aaKnown RBP12.49□□□□□ -0.41
PRKCH-219ENST00000555906 FOXA3P55318 350 aaPredicted RBP12.49□□□□□ -0.41
PRKCH-219ENST00000555906 HIGD2BQ4VC39 106 aa12.49□□□□□ -0.41
PRKCH-219ENST00000555906 CT83Q5H943 113 aa12.49□□□□□ -0.41
PRKCH-219ENST00000555906 DPH3Q96FX2 82 aa12.49□□□□□ -0.41
PRKCH-219ENST00000555906 TRBV6-5A0A0K0K1A5 114 aa12.48□□□□□ -0.41
PRKCH-219ENST00000555906 A8MWL6 223 aa12.48□□□□□ -0.41
PRKCH-219ENST00000555906 NDUFS6O75380 124 aaKnown RBP12.48□□□□□ -0.41
PRKCH-219ENST00000555906 TNXBP22105 4242 aa12.48□□□□□ -0.41
PRKCH-219ENST00000555906 I3L3M4 83 aa12.47□□□□□ -0.41
PRKCH-219ENST00000555906 COX6A2Q02221 97 aa12.47□□□□□ -0.41
PRKCH-219ENST00000555906 OR5A1Q8NGJ0 315 aa12.47□□□□□ -0.41
PRKCH-219ENST00000555906 C7orf33Q8WU49 177 aa12.47□□□□□ -0.41
PRKCH-219ENST00000555906 BLOC1S1P78537 153 aa12.46□□□□□ -0.41
PRKCH-219ENST00000555906 FOXI1Q12951 378 aa12.46□□□□□ -0.41
PRKCH-219ENST00000555906 PHOX2AO14813 284 aa12.45□□□□□ -0.42
PRKCH-219ENST00000555906 LYPD6BQ8NI32 183 aa12.45□□□□□ -0.42
PRKCH-219ENST00000555906 BORCS7Q96B45 105 aa12.45□□□□□ -0.42
PRKCH-219ENST00000555906 BTF3L4Q96K17 158 aa12.45□□□□□ -0.42
PRKCH-219ENST00000555906 FAM210AQ96ND0 272 aa12.45□□□□□ -0.42
PRKCH-219ENST00000555906 FAM231BA6NCW3 169 aa12.44□□□□□ -0.42
PRKCH-219ENST00000555906 PMCHP20382 165 aa12.44□□□□□ -0.42
PRKCH-219ENST00000555906 ALKAL2Q6UX46 152 aa12.44□□□□□ -0.42
PRKCH-219ENST00000555906 PRSS3P2Q8NHM4 247 aa12.44□□□□□ -0.42
PRKCH-219ENST00000555906 TMEM101Q96IK0 257 aa12.44□□□□□ -0.42
PRKCH-219ENST00000555906 IGKV2-24A0A0C4DH68 120 aa12.43□□□□□ -0.42
PRKCH-219ENST00000555906 TSHBP01222 138 aa12.43□□□□□ -0.42
PRKCH-219ENST00000555906 ESDP10768 282 aa12.43□□□□□ -0.42
PRKCH-219ENST00000555906 MAJINQ3KP22 176 aa12.43□□□□□ -0.42
PRKCH-219ENST00000555906 MRAP2Q96G30 205 aa12.43□□□□□ -0.42
PRKCH-219ENST00000555906 PKIGQ9Y2B9 76 aa12.43□□□□□ -0.42
PRKCH-219ENST00000555906 XCL1P47992 114 aa12.42□□□□□ -0.42
PRKCH-219ENST00000555906 AKAP14Q86UN6 197 aa12.42□□□□□ -0.42
PRKCH-219ENST00000555906 ST20Q9HBF5 79 aa12.42□□□□□ -0.42
PRKCH-219ENST00000555906 TMEM242Q9NWH2 141 aa12.42□□□□□ -0.42
PRKCH-219ENST00000555906 LINC00959A0A1B0GUT2 108 aa12.41□□□□□ -0.42
PRKCH-219ENST00000555906 A0A1B0GUT8 65 aa12.41□□□□□ -0.42
PRKCH-219ENST00000555906 GAS8-AS1O95177 125 aa12.41□□□□□ -0.42
PRKCH-219ENST00000555906 CEBPGP53567 150 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms