RNA–Protein interactions for RNA: ENST00000555752.1

SUPT16H-203, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 888 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-203ENST00000555752 ALG5Q9Y673 324 aa11.64□□□□□ -0.55
SUPT16H-203ENST00000555752 BORCS7-ASMTA0A0B4J1R7 106 aa11.63□□□□□ -0.55
SUPT16H-203ENST00000555752 RASL11AQ6T310 242 aa11.63□□□□□ -0.55
SUPT16H-203ENST00000555752 LINC00474Q9P2X8 69 aa11.62□□□□□ -0.55
SUPT16H-203ENST00000555752 FAM231BA6NCW3 169 aa11.61□□□□□ -0.55
SUPT16H-203ENST00000555752 FOXI1Q12951 378 aa11.61□□□□□ -0.55
SUPT16H-203ENST00000555752 KRTAP3-3Q9BYR6 98 aa11.61□□□□□ -0.55
SUPT16H-203ENST00000555752 KRTAP3-2Q9BYR7 98 aa11.61□□□□□ -0.55
SUPT16H-203ENST00000555752 COTL1Q14019 142 aa11.6□□□□□ -0.55
SUPT16H-203ENST00000555752 NIT2Q9NQR4 276 aa11.6□□□□□ -0.55
SUPT16H-203ENST00000555752 IGLC6P0CF74 106 aa11.59□□□□□ -0.55
SUPT16H-203ENST00000555752 PRR26Q8N8Z3 221 aa11.59□□□□□ -0.55
SUPT16H-203ENST00000555752 FER1L6-AS1Q8NA97 138 aa11.59□□□□□ -0.55
SUPT16H-203ENST00000555752 A0A1B0GV50 99 aa11.58□□□□□ -0.56
SUPT16H-203ENST00000555752 S100A9P06702 114 aaKnown RBP11.58□□□□□ -0.56
SUPT16H-203ENST00000555752 CARD19Q96LW7 228 aa11.58□□□□□ -0.56
SUPT16H-203ENST00000555752 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.57□□□□□ -0.56
SUPT16H-203ENST00000555752 FXYD6-FXYD2A0A087WZ82 144 aa11.57□□□□□ -0.56
SUPT16H-203ENST00000555752 IGKV2-29A2NJV5 120 aaPredicted RBP11.57□□□□□ -0.56
SUPT16H-203ENST00000555752 PSORS1C2Q9UIG4 136 aa11.57□□□□□ -0.56
SUPT16H-203ENST00000555752 KRTAP9-6A0A140TA67 174 aa11.56□□□□□ -0.56
SUPT16H-203ENST00000555752 A0A1W2PNN7 141 aa11.56□□□□□ -0.56
SUPT16H-203ENST00000555752 XCL1P47992 114 aa11.56□□□□□ -0.56
SUPT16H-203ENST00000555752 DEFA1P59665 94 aa11.56□□□□□ -0.56
SUPT16H-203ENST00000555752 AMMECR1LQ6DCA0 310 aa11.56□□□□□ -0.56
SUPT16H-203ENST00000555752 RNASEKQ6P5S7 137 aaKnown RBP11.56□□□□□ -0.56
SUPT16H-203ENST00000555752 Q6ZNX1 250 aa11.56□□□□□ -0.56
SUPT16H-203ENST00000555752 PTTG1IPP53801 180 aa11.55□□□□□ -0.56
SUPT16H-203ENST00000555752 GAGE2BQ13066 116 aa11.55□□□□□ -0.56
SUPT16H-203ENST00000555752 TMUB2Q71RG4 321 aa11.55□□□□□ -0.56
SUPT16H-203ENST00000555752 ZNF664Q8N3J9 261 aa11.55□□□□□ -0.56
SUPT16H-203ENST00000555752 NTF3P20783 257 aa11.54□□□□□ -0.56
SUPT16H-203ENST00000555752 CACNG7P62955 275 aa11.54□□□□□ -0.56
SUPT16H-203ENST00000555752 OR2D3Q8NGH3 330 aa11.54□□□□□ -0.56
SUPT16H-203ENST00000555752 CYTL1Q9NRR1 136 aa11.54□□□□□ -0.56
SUPT16H-203ENST00000555752 FAT4Q6V0I7 4981 aa11.54□□□□□ -0.56
SUPT16H-203ENST00000555752 TRAV26-2A0A0B4J265 109 aa11.53□□□□□ -0.56
SUPT16H-203ENST00000555752 SYCNQ0VAF6 134 aa11.53□□□□□ -0.56
SUPT16H-203ENST00000555752 MED28Q9H204 178 aa11.53□□□□□ -0.56
SUPT16H-203ENST00000555752 IGHV1-58A0A0C4DH39 117 aa11.52□□□□□ -0.57
SUPT16H-203ENST00000555752 CCL25O15444 150 aa11.52□□□□□ -0.57
SUPT16H-203ENST00000555752 MT-ND6P03923 174 aa11.52□□□□□ -0.57
SUPT16H-203ENST00000555752 FGF6P10767 208 aa11.52□□□□□ -0.57
SUPT16H-203ENST00000555752 RPL35P42766 123 aaKnown RBP11.52□□□□□ -0.57
SUPT16H-203ENST00000555752 SFT2D1Q8WV19 159 aa11.52□□□□□ -0.57
SUPT16H-203ENST00000555752 PKIGQ9Y2B9 76 aa11.52□□□□□ -0.57
SUPT16H-203ENST00000555752 PFDN1O60925 122 aa11.51□□□□□ -0.57
SUPT16H-203ENST00000555752 C1orf137Q5JT78 98 aa11.51□□□□□ -0.57
SUPT16H-203ENST00000555752 LYZL1Q6UWQ5 148 aa11.51□□□□□ -0.57
SUPT16H-203ENST00000555752 GATD1Q8NB37 220 aa11.51□□□□□ -0.57
SUPT16H-203ENST00000555752 LINC00959A0A1B0GUT2 108 aa11.5□□□□□ -0.57
SUPT16H-203ENST00000555752 GIPP09681 153 aaPredicted RBP11.5□□□□□ -0.57
SUPT16H-203ENST00000555752 TRGC1P0CF51 173 aa11.5□□□□□ -0.57
SUPT16H-203ENST00000555752 BCL2P10415 239 aa11.5□□□□□ -0.57
SUPT16H-203ENST00000555752 OR5A1Q8NGJ0 315 aa11.5□□□□□ -0.57
SUPT16H-203ENST00000555752 RPL39LQ96EH5 51 aaKnown RBP11.5□□□□□ -0.57
SUPT16H-203ENST00000555752 RPS20P60866 119 aaKnown RBP11.49□□□□□ -0.57
SUPT16H-203ENST00000555752 PRR4Q16378 134 aa11.49□□□□□ -0.57
SUPT16H-203ENST00000555752 PHF5AQ7RTV0 110 aaKnown RBP11.49□□□□□ -0.57
SUPT16H-203ENST00000555752 FAM213BQ8TBF2 198 aa11.49□□□□□ -0.57
SUPT16H-203ENST00000555752 LOC107984640A0A0U1RRK4 108 aa11.48□□□□□ -0.57
SUPT16H-203ENST00000555752 C19orf71A6NCJ1 209 aa11.48□□□□□ -0.57
SUPT16H-203ENST00000555752 ZNF561-AS1K7EIQ3 104 aa11.48□□□□□ -0.57
SUPT16H-203ENST00000555752 C9orf116Q5BN46 136 aaPredicted RBP11.48□□□□□ -0.57
SUPT16H-203ENST00000555752 CENPWQ5EE01 88 aa11.48□□□□□ -0.57
SUPT16H-203ENST00000555752 LCE2AQ5TA79 106 aaPredicted RBP11.48□□□□□ -0.57
SUPT16H-203ENST00000555752 MBD3L1Q8WWY6 194 aa11.48□□□□□ -0.57
SUPT16H-203ENST00000555752 IGLV4-69A0A075B6H9 119 aa11.47□□□□□ -0.57
SUPT16H-203ENST00000555752 A0A0U1RQV1 116 aa11.47□□□□□ -0.57
SUPT16H-203ENST00000555752 F2Z2F3 143 aa11.47□□□□□ -0.57
SUPT16H-203ENST00000555752 G3V3Q6 166 aa11.47□□□□□ -0.57
SUPT16H-203ENST00000555752 CAMPP49913 170 aa11.47□□□□□ -0.57
SUPT16H-203ENST00000555752 APCSP02743 223 aa11.46□□□□□ -0.57
SUPT16H-203ENST00000555752 KCNRGQ8N5I3 272 aa11.46□□□□□ -0.57
SUPT16H-203ENST00000555752 H7C423 109 aa11.45□□□□□ -0.58
SUPT16H-203ENST00000555752 ARPC5O15511 151 aa11.45□□□□□ -0.58
SUPT16H-203ENST00000555752 NCR2O95944 276 aa11.45□□□□□ -0.58
SUPT16H-203ENST00000555752 RAB19A4D1S5 217 aa11.44□□□□□ -0.58
SUPT16H-203ENST00000555752 IFNA1P01562 189 aa11.44□□□□□ -0.58
SUPT16H-203ENST00000555752 IGLV7-43P04211 117 aa11.44□□□□□ -0.58
SUPT16H-203ENST00000555752 KRTAP11-1Q8IUC1 163 aa11.44□□□□□ -0.58
SUPT16H-203ENST00000555752 DIRC1Q969H9 104 aa11.44□□□□□ -0.58
SUPT16H-203ENST00000555752 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.43□□□□□ -0.58
SUPT16H-203ENST00000555752 ZNF25P17030 456 aaPredicted RBP11.43□□□□□ -0.58
SUPT16H-203ENST00000555752 FOXA3P55318 350 aaPredicted RBP11.43□□□□□ -0.58
SUPT16H-203ENST00000555752 MEF2BQ02080 365 aaPredicted RBP11.43□□□□□ -0.58
SUPT16H-203ENST00000555752 TWIST1Q15672 202 aa11.43□□□□□ -0.58
SUPT16H-203ENST00000555752 NUP35Q8NFH5 326 aa11.43□□□□□ -0.58
SUPT16H-203ENST00000555752 C11orf52Q96A22 123 aa11.43□□□□□ -0.58
SUPT16H-203ENST00000555752 CTRLP40313 264 aa11.42□□□□□ -0.58
SUPT16H-203ENST00000555752 CCL20P78556 96 aa11.42□□□□□ -0.58
SUPT16H-203ENST00000555752 CD164L2Q6UWJ8 174 aa11.42□□□□□ -0.58
SUPT16H-203ENST00000555752 C9orf62Q8N4C0 152 aa11.42□□□□□ -0.58
SUPT16H-203ENST00000555752 TMEM101Q96IK0 257 aa11.42□□□□□ -0.58
SUPT16H-203ENST00000555752 BTF3L4Q96K17 158 aa11.42□□□□□ -0.58
SUPT16H-203ENST00000555752 XKRY2A2RUG3 117 aa11.41□□□□□ -0.58
SUPT16H-203ENST00000555752 SDHAF1A6NFY7 115 aa11.41□□□□□ -0.58
SUPT16H-203ENST00000555752 H0Y9J4 135 aa11.41□□□□□ -0.58
SUPT16H-203ENST00000555752 APOMO95445 188 aa11.41□□□□□ -0.58
SUPT16H-203ENST00000555752 KRTAP1-4P0C5Y4 121 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms