RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 SNCGO76070 127 aa-0.45□□□□□ -2.48
SRP54-207ENST00000555535 IFNA17P01571 189 aa-0.45□□□□□ -2.48
SRP54-207ENST00000555535 SCTP09683 121 aa-0.45□□□□□ -2.48
SRP54-207ENST00000555535 NEFHP12036 1026 aa-0.45□□□□□ -2.48
SRP54-207ENST00000555535 S100A3P33764 101 aa-0.45□□□□□ -2.48
SRP54-207ENST00000555535 RPS28P62857 69 aaKnown RBP-0.45□□□□□ -2.48
SRP54-207ENST00000555535 DCDP81605 110 aaKnown RBP-0.45□□□□□ -2.48
SRP54-207ENST00000555535 DDA1Q9BW61 102 aa-0.45□□□□□ -2.48
SRP54-207ENST00000555535 MRPL40Q9NQ50 206 aaKnown RBP-0.45□□□□□ -2.48
SRP54-207ENST00000555535 LINC00312Q9Y6C7 94 aa-0.45□□□□□ -2.48
SRP54-207ENST00000555535 SPTA1P02549 2419 aa-0.45□□□□□ -2.48
SRP54-207ENST00000555535 ARHGEF10O15013 1369 aa-0.45□□□□□ -2.48
SRP54-207ENST00000555535 PAPPAQ13219 1627 aa-0.46□□□□□ -2.48
SRP54-207ENST00000555535 PCLOQ9Y6V0 5065 aa-0.46□□□□□ -2.48
SRP54-207ENST00000555535 PPP1R17O96001 155 aa-0.46□□□□□ -2.48
SRP54-207ENST00000555535 PIPP12273 146 aaPredicted RBP-0.46□□□□□ -2.48
SRP54-207ENST00000555535 Q6ZUT4 128 aa-0.46□□□□□ -2.48
SRP54-207ENST00000555535 MMGT1Q8N4V1 131 aa-0.46□□□□□ -2.48
SRP54-207ENST00000555535 AIF1LQ9BQI0 150 aa-0.46□□□□□ -2.48
SRP54-207ENST00000555535 SEC11CQ9BY50 192 aa-0.46□□□□□ -2.48
SRP54-207ENST00000555535 TP53AIP1Q9HCN2 124 aa-0.46□□□□□ -2.48
SRP54-207ENST00000555535 CNOT1A5YKK6 2376 aaKnown RBP-0.46□□□□□ -2.48
SRP54-207ENST00000555535 KIF21AQ7Z4S6 1674 aa-0.46□□□□□ -2.48
SRP54-207ENST00000555535 URB1O60287 2271 aaKnown RBP-0.47□□□□□ -2.48
SRP54-207ENST00000555535 CASKIN1Q8WXD9 1431 aa-0.47□□□□□ -2.48
SRP54-207ENST00000555535 K7ERU9 68 aa-0.47□□□□□ -2.48
SRP54-207ENST00000555535 IGLC6P0CF74 106 aa-0.47□□□□□ -2.48
SRP54-207ENST00000555535 HIST1H1AQ02539 215 aaPredicted RBP-0.47□□□□□ -2.48
SRP54-207ENST00000555535 SPTSSAQ969W0 71 aa-0.47□□□□□ -2.48
SRP54-207ENST00000555535 AGPAT4-IT1Q9H0P7 198 aa-0.47□□□□□ -2.48
SRP54-207ENST00000555535 LRP1BQ9NZR2 4599 aa-0.47□□□□□ -2.48
SRP54-207ENST00000555535 FLNBO75369 2602 aaKnown RBP-0.47□□□□□ -2.48
SRP54-207ENST00000555535 LRRC37A2A6NM11 1700 aa-0.47□□□□□ -2.49
SRP54-207ENST00000555535 DNAJC13O75165 2243 aa-0.48□□□□□ -2.49
SRP54-207ENST00000555535 KMT2CQ8NEZ4 4911 aaKnown RBP-0.48□□□□□ -2.49
SRP54-207ENST00000555535 TRBV6-1A0A0K0K1D8 114 aa-0.48□□□□□ -2.49
SRP54-207ENST00000555535 M0R135 149 aa-0.48□□□□□ -2.49
SRP54-207ENST00000555535 DBIP07108 87 aaKnown RBP-0.48□□□□□ -2.49
SRP54-207ENST00000555535 LINC00694P0DN24 101 aa-0.48□□□□□ -2.49
SRP54-207ENST00000555535 CCL18P55774 89 aa-0.48□□□□□ -2.49
SRP54-207ENST00000555535 SAR1AQ9NR31 198 aa-0.48□□□□□ -2.49
SRP54-207ENST00000555535 GOLGA4Q13439 2230 aaKnown RBP-0.48□□□□□ -2.49
SRP54-207ENST00000555535 PIEZO2Q9H5I5 2752 aa-0.48□□□□□ -2.49
SRP54-207ENST00000555535 MRC1P22897 1456 aa-0.48□□□□□ -2.49
SRP54-207ENST00000555535 PDZD2O15018 2839 aa-0.49□□□□□ -2.49
SRP54-207ENST00000555535 J3QR89 54 aa-0.49□□□□□ -2.49
SRP54-207ENST00000555535 PITX3O75364 302 aa-0.49□□□□□ -2.49
SRP54-207ENST00000555535 CBLN1P23435 193 aa-0.49□□□□□ -2.49
SRP54-207ENST00000555535 PIGYQ3MUY2 71 aa-0.49□□□□□ -2.49
SRP54-207ENST00000555535 ZNF818PQ6ZRF7 136 aa-0.49□□□□□ -2.49
SRP54-207ENST00000555535 TSTD1Q8NFU3 115 aa-0.49□□□□□ -2.49
SRP54-207ENST00000555535 R4GMQ9 66 aa-0.49□□□□□ -2.49
SRP54-207ENST00000555535 DAPK1P53355 1430 aa-0.49□□□□□ -2.49
SRP54-207ENST00000555535 EP300Q09472 2414 aaPredicted RBP-0.49□□□□□ -2.49
SRP54-207ENST00000555535 I3L2K1 104 aa-0.5□□□□□ -2.49
SRP54-207ENST00000555535 M0R2Z0 102 aa-0.5□□□□□ -2.49
SRP54-207ENST00000555535 NDUFB6O95139 128 aa-0.5□□□□□ -2.49
SRP54-207ENST00000555535 TNFP01375 233 aa-0.5□□□□□ -2.49
SRP54-207ENST00000555535 NBEAP1P0C6P0 100 aa-0.5□□□□□ -2.49
SRP54-207ENST00000555535 S100A5P33763 92 aa-0.5□□□□□ -2.49
SRP54-207ENST00000555535 SPRR2BP35325 72 aa-0.5□□□□□ -2.49
SRP54-207ENST00000555535 CKS1BP61024 79 aa-0.5□□□□□ -2.49
SRP54-207ENST00000555535 RBM3P98179 157 aaKnown RBP-0.5□□□□□ -2.49
SRP54-207ENST00000555535 MORN2Q502X0 79 aa-0.5□□□□□ -2.49
SRP54-207ENST00000555535 C10orf128Q5T292 105 aa-0.5□□□□□ -2.49
SRP54-207ENST00000555535 TMEM170BQ5T4T1 132 aa-0.5□□□□□ -2.49
SRP54-207ENST00000555535 Q5VV11 94 aa-0.5□□□□□ -2.49
SRP54-207ENST00000555535 Q6JHZ5 121 aa-0.5□□□□□ -2.49
SRP54-207ENST00000555535 SMIM4Q8WVI0 70 aa-0.5□□□□□ -2.49
SRP54-207ENST00000555535 V9GYH0 126 aa-0.5□□□□□ -2.49
SRP54-207ENST00000555535 OVOS2A0A0J9YW53 1432 aa-0.5□□□□□ -2.49
SRP54-207ENST00000555535 OVOS2Q6IE36 1432 aa-0.5□□□□□ -2.49
SRP54-207ENST00000555535 WDR7Q9Y4E6 1490 aa-0.5□□□□□ -2.49
SRP54-207ENST00000555535 ADGRB1O14514 1584 aa-0.5□□□□□ -2.49
SRP54-207ENST00000555535 TENM2Q9NT68 2774 aa-0.51□□□□□ -2.49
SRP54-207ENST00000555535 DISP2A7MBM2 1401 aa-0.51□□□□□ -2.49
SRP54-207ENST00000555535 SPRR1BP22528 89 aa-0.51□□□□□ -2.49
SRP54-207ENST00000555535 KLK9Q2XQG4 91 aa-0.51□□□□□ -2.49
SRP54-207ENST00000555535 KRTAP19-8Q3LI54 63 aa-0.51□□□□□ -2.49
SRP54-207ENST00000555535 LZICQ8WZA0 190 aa-0.51□□□□□ -2.49
SRP54-207ENST00000555535 CREBBPQ92793 2442 aa-0.51□□□□□ -2.49
SRP54-207ENST00000555535 AQP10Q96PS8 301 aa-0.51□□□□□ -2.49
SRP54-207ENST00000555535 TPT1P8Q9HAU6 139 aa-0.51□□□□□ -2.49
SRP54-207ENST00000555535 TMEM2Q9UHN6 1383 aa-0.51□□□□□ -2.49
SRP54-207ENST00000555535 COL6A3P12111 3177 aa-0.51□□□□□ -2.49
SRP54-207ENST00000555535 MAP1AP78559 2803 aaPredicted RBP-0.51□□□□□ -2.49
SRP54-207ENST00000555535 HERC1Q15751 4861 aa-0.52□□□□□ -2.49
SRP54-207ENST00000555535 HERC2O95714 4834 aa-0.52□□□□□ -2.49
SRP54-207ENST00000555535 PRKDCP78527 4128 aaKnown RBP-0.52□□□□□ -2.49
SRP54-207ENST00000555535 TRAV13-2A0A0B4J235 113 aa-0.52□□□□□ -2.49
SRP54-207ENST00000555535 HCG22E2RYF7 251 aa-0.52□□□□□ -2.49
SRP54-207ENST00000555535 CCL8P80075 99 aa-0.52□□□□□ -2.49
SRP54-207ENST00000555535 TAC4Q86UU9 113 aa-0.52□□□□□ -2.49
SRP54-207ENST00000555535 KCNRGQ8N5I3 272 aa-0.52□□□□□ -2.49
SRP54-207ENST00000555535 TTC9CQ8N5M4 171 aa-0.52□□□□□ -2.49
SRP54-207ENST00000555535 SPANXCQ9NY87 97 aa-0.52□□□□□ -2.49
SRP54-207ENST00000555535 GSKIPQ9P0R6 139 aa-0.52□□□□□ -2.49
SRP54-207ENST00000555535 SETXQ7Z333 2677 aaKnown RBP-0.52□□□□□ -2.49
SRP54-207ENST00000555535 CHD8Q9HCK8 2581 aa-0.52□□□□□ -2.49
SRP54-207ENST00000555535 COX6B1P14854 86 aa-0.53□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms