RNA–Protein interactions for RNA: ENST00000555379.1

LINC00641-201, long intergenic non-protein coding RNA 641, humanhuman

Gene LINC00641, Length 5,425 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-201ENST00000555379 MUC6Q6W4X9 2439 aa6.36□□□□□ -1.39
LINC00641-201ENST00000555379 MSMPQ1L6U9 139 aa6.36□□□□□ -1.39
LINC00641-201ENST00000555379 HIST2H2BCQ6DN03 193 aa6.36□□□□□ -1.39
LINC00641-201ENST00000555379 HIST2H2BDQ6DRA6 164 aa6.36□□□□□ -1.39
LINC00641-201ENST00000555379 Q9HAA7 133 aa6.36□□□□□ -1.39
LINC00641-201ENST00000555379 CXCL6P80162 114 aa6.35□□□□□ -1.39
LINC00641-201ENST00000555379 CFAP126Q5VTH2 177 aa6.35□□□□□ -1.39
LINC00641-201ENST00000555379 KMT2EQ8IZD2 1858 aa6.35□□□□□ -1.39
LINC00641-201ENST00000555379 LOC107984640A0A0U1RRK4 108 aa6.35□□□□□ -1.39
LINC00641-201ENST00000555379 MALRD1Q5VYJ5 2156 aa6.35□□□□□ -1.39
LINC00641-201ENST00000555379 EIF4EBP1Q13541 118 aaPredicted RBP6.35□□□□□ -1.39
LINC00641-201ENST00000555379 LINC01006Q8NI28 216 aa6.35□□□□□ -1.39
LINC00641-201ENST00000555379 ZGRF1Q86YA3 2104 aa6.35□□□□□ -1.39
LINC00641-201ENST00000555379 Q6ZQT7 251 aa6.35□□□□□ -1.39
LINC00641-201ENST00000555379 USP17L23D6RBM5 183 aa6.34□□□□□ -1.39
LINC00641-201ENST00000555379 SDIM1Q6ZPB5 146 aa6.34□□□□□ -1.39
LINC00641-201ENST00000555379 C19orf71A6NCJ1 209 aa6.34□□□□□ -1.39
LINC00641-201ENST00000555379 SND1-IT1Q9HBX3 110 aa6.34□□□□□ -1.39
LINC00641-201ENST00000555379 TEX49A0A1B0GTD5 131 aa6.34□□□□□ -1.4
LINC00641-201ENST00000555379 IGLV2-14P01704 120 aa6.34□□□□□ -1.4
LINC00641-201ENST00000555379 C17orf77Q96MU5 243 aa6.34□□□□□ -1.4
LINC00641-201ENST00000555379 C11orf1Q9H5F2 150 aa6.34□□□□□ -1.4
LINC00641-201ENST00000555379 TRBV6-5A0A0K0K1A5 114 aa6.33□□□□□ -1.4
LINC00641-201ENST00000555379 DOCK9Q9BZ29 2069 aa6.33□□□□□ -1.4
LINC00641-201ENST00000555379 MPDZO75970 2070 aa6.33□□□□□ -1.4
LINC00641-201ENST00000555379 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.33□□□□□ -1.4
LINC00641-201ENST00000555379 IGKV2-29A2NJV5 120 aaPredicted RBP6.33□□□□□ -1.4
LINC00641-201ENST00000555379 IGHV3-30P01768 117 aa6.33□□□□□ -1.4
LINC00641-201ENST00000555379 IGHV3-33P01772 117 aa6.33□□□□□ -1.4
LINC00641-201ENST00000555379 IGHV3-30-3P0DP02 117 aa6.33□□□□□ -1.4
LINC00641-201ENST00000555379 IGHV3-30-5P0DP03 117 aa6.33□□□□□ -1.4
LINC00641-201ENST00000555379 ZFAND3Q9H8U3 227 aa6.33□□□□□ -1.4
LINC00641-201ENST00000555379 TRAV26-2A0A0B4J265 109 aa6.33□□□□□ -1.4
LINC00641-201ENST00000555379 GATA1P15976 413 aaPredicted RBP6.33□□□□□ -1.4
LINC00641-201ENST00000555379 LELP1Q5T871 98 aa6.33□□□□□ -1.4
LINC00641-201ENST00000555379 PYGO1Q9Y3Y4 419 aa6.33□□□□□ -1.4
LINC00641-201ENST00000555379 CHD3Q12873 2000 aaKnown RBP6.33□□□□□ -1.4
LINC00641-201ENST00000555379 Q6JHZ5 121 aa6.32□□□□□ -1.4
LINC00641-201ENST00000555379 GVINP1Q7Z2Y8 2422 aa6.32□□□□□ -1.4
LINC00641-201ENST00000555379 CD164Q04900 197 aa6.32□□□□□ -1.4
LINC00641-201ENST00000555379 LINC00173Q6ZV60 143 aa6.32□□□□□ -1.4
LINC00641-201ENST00000555379 CRYGDP07320 174 aa6.32□□□□□ -1.4
LINC00641-201ENST00000555379 RITA1Q96K30 269 aa6.32□□□□□ -1.4
LINC00641-201ENST00000555379 LINC00467Q9BRT7 94 aa6.32□□□□□ -1.4
LINC00641-201ENST00000555379 NREPQ16612 68 aa6.32□□□□□ -1.4
LINC00641-201ENST00000555379 FAM222AQ5U5X8 452 aa6.32□□□□□ -1.4
LINC00641-201ENST00000555379 C5orf38Q86SI9 138 aa6.32□□□□□ -1.4
LINC00641-201ENST00000555379 C14orf132Q9NPU4 83 aa6.32□□□□□ -1.4
LINC00641-201ENST00000555379 DOCK10Q96BY6 2186 aa6.32□□□□□ -1.4
LINC00641-201ENST00000555379 TMEM256-PLSCR3K7ERE1 68 aa6.32□□□□□ -1.4
LINC00641-201ENST00000555379 CASC2Q6XLA1 102 aa6.32□□□□□ -1.4
LINC00641-201ENST00000555379 ZFAND2AQ8N6M9 145 aa6.32□□□□□ -1.4
LINC00641-201ENST00000555379 Q8N976 141 aa6.32□□□□□ -1.4
LINC00641-201ENST00000555379 IGKV1D-37A0A075B6S9 117 aa6.31□□□□□ -1.4
LINC00641-201ENST00000555379 K7ERS5 55 aa6.31□□□□□ -1.4
LINC00641-201ENST00000555379 USF3Q68DE3 2245 aa6.31□□□□□ -1.4
LINC00641-201ENST00000555379 DYSFO75923 2080 aa6.31□□□□□ -1.4
LINC00641-201ENST00000555379 TNRC6AQ8NDV7 1962 aaKnown RBP6.31□□□□□ -1.4
LINC00641-201ENST00000555379 IBA57-AS1B1ANH7 110 aa6.31□□□□□ -1.4
LINC00641-201ENST00000555379 UNQ9165/PRO28630Q6UXU0 137 aa6.31□□□□□ -1.4
LINC00641-201ENST00000555379 CLEC2BQ92478 149 aa6.31□□□□□ -1.4
LINC00641-201ENST00000555379 REG3AQ06141 175 aa6.3□□□□□ -1.4
LINC00641-201ENST00000555379 KLK12Q9UKR0 248 aa6.3□□□□□ -1.4
LINC00641-201ENST00000555379 PCDH15Q96QU1 1955 aa6.3□□□□□ -1.4
LINC00641-201ENST00000555379 A0A096LPF7 62 aa6.3□□□□□ -1.4
LINC00641-201ENST00000555379 MRPS12O15235 138 aaKnown RBP6.3□□□□□ -1.4
LINC00641-201ENST00000555379 PRB2P02812 416 aaPredicted RBP6.3□□□□□ -1.4
LINC00641-201ENST00000555379 COX7BP24311 80 aa6.3□□□□□ -1.4
LINC00641-201ENST00000555379 TRBV30A0A0K0K1B3 111 aa6.29□□□□□ -1.4
LINC00641-201ENST00000555379 AKAP6Q13023 2319 aa6.29□□□□□ -1.4
LINC00641-201ENST00000555379 SNRNP200O75643 2136 aaKnown RBP6.29□□□□□ -1.4
LINC00641-201ENST00000555379 TRAV7A0A075B6U4 112 aa6.29□□□□□ -1.4
LINC00641-201ENST00000555379 WIPF1O43516 503 aa6.29□□□□□ -1.4
LINC00641-201ENST00000555379 KIAA2026Q5HYC2 2103 aa6.29□□□□□ -1.4
LINC00641-201ENST00000555379 C9orf85Q96MD7 179 aa6.29□□□□□ -1.4
LINC00641-201ENST00000555379 EML6Q6ZMW3 1958 aa6.29□□□□□ -1.4
LINC00641-201ENST00000555379 ALPK3Q96L96 1907 aa6.29□□□□□ -1.4
LINC00641-201ENST00000555379 SPTBN1Q01082 2364 aaKnown RBP6.29□□□□□ -1.4
LINC00641-201ENST00000555379 PLAC8L1A1L4L8 177 aa6.28□□□□□ -1.4
LINC00641-201ENST00000555379 COX17Q14061 63 aa6.28□□□□□ -1.4
LINC00641-201ENST00000555379 DAND5Q8N907 189 aa6.28□□□□□ -1.4
LINC00641-201ENST00000555379 TRBV6-8A0A0A6YYG3 113 aa6.28□□□□□ -1.4
LINC00641-201ENST00000555379 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.28□□□□□ -1.4
LINC00641-201ENST00000555379 IGHV4-4A0A075B6R2 117 aa6.28□□□□□ -1.4
LINC00641-201ENST00000555379 TRBV27A0A0K0K1C4 114 aa6.27□□□□□ -1.41
LINC00641-201ENST00000555379 PRAC2D3DTV9 90 aa6.27□□□□□ -1.41
LINC00641-201ENST00000555379 ENHOQ6UWT2 76 aa6.27□□□□□ -1.41
LINC00641-201ENST00000555379 RPL39LQ96EH5 51 aaKnown RBP6.27□□□□□ -1.41
LINC00641-201ENST00000555379 MED12Q93074 2177 aa6.27□□□□□ -1.41
LINC00641-201ENST00000555379 A0A0J9YXV3 536 aa6.27□□□□□ -1.41
LINC00641-201ENST00000555379 LINC01561Q8N1V8 128 aa6.27□□□□□ -1.41
LINC00641-201ENST00000555379 DHRS4-AS1Q9P1J3 65 aa6.27□□□□□ -1.41
LINC00641-201ENST00000555379 IGLV4-69A0A075B6H9 119 aa6.27□□□□□ -1.41
LINC00641-201ENST00000555379 KLLNB2CW77 178 aa6.27□□□□□ -1.41
LINC00641-201ENST00000555379 CLPSL2Q6UWE3 100 aa6.27□□□□□ -1.41
LINC00641-201ENST00000555379 A0A1B0GXF2 115 aa6.26□□□□□ -1.41
LINC00641-201ENST00000555379 HIVEP2P31629 2446 aa6.26□□□□□ -1.41
LINC00641-201ENST00000555379 DOCK7Q96N67 2140 aa6.26□□□□□ -1.41
LINC00641-201ENST00000555379 IGLV1-51P01701 117 aa6.26□□□□□ -1.41
LINC00641-201ENST00000555379 CD164L2Q6UWJ8 174 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms