RNA–Protein interactions for RNA: ENST00000555353.5

FOXN3-209, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 1,595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-209ENST00000555353 POLR2KP53803 58 aaKnown RBP14.05□□□□□ -0.16
FOXN3-209ENST00000555353 PRSS3P2Q8NHM4 247 aa14.05□□□□□ -0.16
FOXN3-209ENST00000555353 C18orf32Q8TCD1 76 aa14.05□□□□□ -0.16
FOXN3-209ENST00000555353 KIR2DL4Q99706 377 aa14.05□□□□□ -0.16
FOXN3-209ENST00000555353 TRBV27A0A0K0K1C4 114 aa14.04□□□□□ -0.16
FOXN3-209ENST00000555353 I3L3M4 83 aa14.04□□□□□ -0.16
FOXN3-209ENST00000555353 LINC00694P0DN24 101 aa14.04□□□□□ -0.16
FOXN3-209ENST00000555353 C1orf134Q5TEV5 83 aa14.04□□□□□ -0.16
FOXN3-209ENST00000555353 GTSF1LQ9H1H1 148 aa14.04□□□□□ -0.16
FOXN3-209ENST00000555353 TCAPO15273 167 aa14.03□□□□□ -0.16
FOXN3-209ENST00000555353 TMEM97Q5BJF2 176 aa14.03□□□□□ -0.16
FOXN3-209ENST00000555353 Q0VG73 95 aa14.02□□□□□ -0.16
FOXN3-209ENST00000555353 COTL1Q14019 142 aa14.02□□□□□ -0.16
FOXN3-209ENST00000555353 WFDC10BQ8IUB3 73 aa14.02□□□□□ -0.16
FOXN3-209ENST00000555353 Q8N8P6 123 aa14.02□□□□□ -0.16
FOXN3-209ENST00000555353 TRAV8-6A0A0B4J262 113 aa14.01□□□□□ -0.17
FOXN3-209ENST00000555353 HIST1H2BKO60814 126 aa14.01□□□□□ -0.17
FOXN3-209ENST00000555353 HIST1H2BJP06899 126 aa14.01□□□□□ -0.17
FOXN3-209ENST00000555353 HIST1H2BOP23527 126 aa14.01□□□□□ -0.17
FOXN3-209ENST00000555353 HIST1H2BBP33778 126 aa14.01□□□□□ -0.17
FOXN3-209ENST00000555353 HIST1H2BDP58876 126 aa14.01□□□□□ -0.17
FOXN3-209ENST00000555353 HIST1H2BCP62807 126 aa14.01□□□□□ -0.17
FOXN3-209ENST00000555353 HIST2H2BEQ16778 126 aa14.01□□□□□ -0.17
FOXN3-209ENST00000555353 IQCJQ1A5X6 159 aa14.01□□□□□ -0.17
FOXN3-209ENST00000555353 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.01□□□□□ -0.17
FOXN3-209ENST00000555353 FA2HQ7L5A8 372 aa14.01□□□□□ -0.17
FOXN3-209ENST00000555353 BAGE3Q86Y29 109 aa14.01□□□□□ -0.17
FOXN3-209ENST00000555353 HIST1H2BHQ93079 126 aa14.01□□□□□ -0.17
FOXN3-209ENST00000555353 HIST1H2BNQ99877 126 aa14.01□□□□□ -0.17
FOXN3-209ENST00000555353 HIST1H2BMQ99879 126 aa14.01□□□□□ -0.17
FOXN3-209ENST00000555353 IGHV3-38A0A0C4DH36 116 aa14□□□□□ -0.17
FOXN3-209ENST00000555353 FCER1GP30273 86 aa14□□□□□ -0.17
FOXN3-209ENST00000555353 LINC00336Q6ZUF6 198 aa14□□□□□ -0.17
FOXN3-209ENST00000555353 K7EMI3 77 aa14□□□□□ -0.17
FOXN3-209ENST00000555353 IFI27P40305 119 aaPredicted RBP14□□□□□ -0.17
FOXN3-209ENST00000555353 LELP1Q5T871 98 aa14□□□□□ -0.17
FOXN3-209ENST00000555353 KRTAP1-5Q9BYS1 174 aa14□□□□□ -0.17
FOXN3-209ENST00000555353 RTL8CO15255 209 aa13.99□□□□□ -0.17
FOXN3-209ENST00000555353 C6orf223Q8N319 242 aa13.99□□□□□ -0.17
FOXN3-209ENST00000555353 TRAV9-2A0A087WT02 112 aa13.98□□□□□ -0.17
FOXN3-209ENST00000555353 DNAH10Q8IVF4 4471 aa13.98□□□□□ -0.17
FOXN3-209ENST00000555353 LINC00614P0C842 121 aa13.97□□□□□ -0.17
FOXN3-209ENST00000555353 DNAH10OSP0CZ25 163 aa13.97□□□□□ -0.17
FOXN3-209ENST00000555353 RNASEKQ6P5S7 137 aaKnown RBP13.96□□□□□ -0.17
FOXN3-209ENST00000555353 NIT1Q86X76 327 aa13.96□□□□□ -0.17
FOXN3-209ENST00000555353 AP5S1Q9NUS5 200 aa13.96□□□□□ -0.17
FOXN3-209ENST00000555353 FRAS1Q86XX4 4008 aa13.96□□□□□ -0.17
FOXN3-209ENST00000555353 K7EP13 123 aa13.96□□□□□ -0.18
FOXN3-209ENST00000555353 ORMDL2Q53FV1 153 aa13.96□□□□□ -0.18
FOXN3-209ENST00000555353 CHCHD1Q96BP2 118 aaKnown RBP13.96□□□□□ -0.18
FOXN3-209ENST00000555353 DNAH2Q9P225 4427 aa13.95□□□□□ -0.18
FOXN3-209ENST00000555353 TRBV25-1A0A075B6N4 114 aa13.95□□□□□ -0.18
FOXN3-209ENST00000555353 IGHV1-24A0A0C4DH33 117 aa13.95□□□□□ -0.18
FOXN3-209ENST00000555353 PRSS29PA6NIE9 313 aa13.95□□□□□ -0.18
FOXN3-209ENST00000555353 TSHBP01222 138 aa13.95□□□□□ -0.18
FOXN3-209ENST00000555353 AMTP48728 403 aa13.95□□□□□ -0.18
FOXN3-209ENST00000555353 LAGE3Q14657 143 aa13.95□□□□□ -0.18
FOXN3-209ENST00000555353 TRBV6-8A0A0A6YYG3 113 aa13.94□□□□□ -0.18
FOXN3-209ENST00000555353 BTF3P20290 206 aaKnown RBP13.94□□□□□ -0.18
FOXN3-209ENST00000555353 G0S2P27469 103 aa13.94□□□□□ -0.18
FOXN3-209ENST00000555353 NDUFA6P56556 154 aa13.94□□□□□ -0.18
FOXN3-209ENST00000555353 C10orf126Q8N4M7 172 aa13.93□□□□□ -0.18
FOXN3-209ENST00000555353 DEFB104AQ8WTQ1 72 aa13.93□□□□□ -0.18
FOXN3-209ENST00000555353 LINC01546A6NGU7 62 aa13.92□□□□□ -0.18
FOXN3-209ENST00000555353 HSBP1O75506 76 aa13.92□□□□□ -0.18
FOXN3-209ENST00000555353 S100A6P06703 90 aa13.92□□□□□ -0.18
FOXN3-209ENST00000555353 LINC01556Q5JQF7 62 aa13.92□□□□□ -0.18
FOXN3-209ENST00000555353 SERF1AO75920 110 aa13.92□□□□□ -0.18
FOXN3-209ENST00000555353 NTM-AS1Q6ZSK4 140 aa13.92□□□□□ -0.18
FOXN3-209ENST00000555353 TMEM18Q96B42 140 aa13.92□□□□□ -0.18
FOXN3-209ENST00000555353 TMEM243Q9BU79 118 aa13.92□□□□□ -0.18
FOXN3-209ENST00000555353 URB1-AS1Q96HZ7 61 aa13.91□□□□□ -0.18
FOXN3-209ENST00000555353 COA6Q5JTJ3 125 aaKnown RBP13.9□□□□□ -0.18
FOXN3-209ENST00000555353 UBE2L6O14933 153 aa13.89□□□□□ -0.19
FOXN3-209ENST00000555353 IGHV3-30P01768 117 aa13.89□□□□□ -0.19
FOXN3-209ENST00000555353 IGHV3-33P01772 117 aa13.89□□□□□ -0.19
FOXN3-209ENST00000555353 IGHV3-30-3P0DP02 117 aa13.89□□□□□ -0.19
FOXN3-209ENST00000555353 IGHV3-30-5P0DP03 117 aa13.89□□□□□ -0.19
FOXN3-209ENST00000555353 SMAGPQ0VAQ4 97 aa13.89□□□□□ -0.19
FOXN3-209ENST00000555353 CHCHD5Q9BSY4 110 aa13.89□□□□□ -0.19
FOXN3-209ENST00000555353 EPPK1P58107 5090 aaKnown RBP13.89□□□□□ -0.19
FOXN3-209ENST00000555353 LINC01549A6NIU2 74 aa13.88□□□□□ -0.19
FOXN3-209ENST00000555353 ESDP10768 282 aa13.88□□□□□ -0.19
FOXN3-209ENST00000555353 PKIAP61925 76 aa13.88□□□□□ -0.19
FOXN3-209ENST00000555353 CHCHD7Q9BUK0 85 aa13.88□□□□□ -0.19
FOXN3-209ENST00000555353 H7C423 109 aa13.88□□□□□ -0.19
FOXN3-209ENST00000555353 NFE4Q86UQ8 179 aa13.88□□□□□ -0.19
FOXN3-209ENST00000555353 C20orf203Q8NBC4 194 aa13.88□□□□□ -0.19
FOXN3-209ENST00000555353 CYSLTR1Q9Y271 337 aa13.88□□□□□ -0.19
FOXN3-209ENST00000555353 TMA7Q9Y2S6 64 aaKnown RBP13.87□□□□□ -0.19
FOXN3-209ENST00000555353 HBDP02042 147 aa13.86□□□□□ -0.19
FOXN3-209ENST00000555353 LINC00310P59036 64 aa13.85□□□□□ -0.19
FOXN3-209ENST00000555353 TNP2Q05952 138 aa13.85□□□□□ -0.19
FOXN3-209ENST00000555353 C2orf66Q6UXQ4 117 aa13.85□□□□□ -0.19
FOXN3-209ENST00000555353 FAT2Q9NYQ8 4349 aa13.84□□□□□ -0.19
FOXN3-209ENST00000555353 Q8N3U1 123 aa13.84□□□□□ -0.19
FOXN3-209ENST00000555353 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.83□□□□□ -0.19
FOXN3-209ENST00000555353 A0A087WX48 190 aa13.83□□□□□ -0.19
FOXN3-209ENST00000555353 IGKV2-29A2NJV5 120 aaPredicted RBP13.83□□□□□ -0.19
FOXN3-209ENST00000555353 IBA57-AS1B1ANH7 110 aa13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 130.5 ms