RNA–Protein interactions for RNA: ENST00000555305.5

IFT43-209, Transcript of intraflagellar transport 43, humanhuman

TSL 2

Gene IFT43, Length 1,765 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-209ENST00000555305 COL5A1-AS1Q5SY13 56 aa10.4□□□□□ -0.74
IFT43-209ENST00000555305 C3orf56Q8N813 242 aa10.4□□□□□ -0.74
IFT43-209ENST00000555305 FGF6P10767 208 aa10.39□□□□□ -0.75
IFT43-209ENST00000555305 GAGE12BA1L429 117 aa10.39□□□□□ -0.75
IFT43-209ENST00000555305 GAGE7O76087 117 aa10.39□□□□□ -0.75
IFT43-209ENST00000555305 GAGE12FP0CL80 117 aa10.39□□□□□ -0.75
IFT43-209ENST00000555305 GAGE12GP0CL81 117 aa10.39□□□□□ -0.75
IFT43-209ENST00000555305 GAGE12IP0CL82 117 aa10.39□□□□□ -0.75
IFT43-209ENST00000555305 HERVK_113P61574 105 aa10.39□□□□□ -0.75
IFT43-209ENST00000555305 VCX2Q9H322 139 aa10.39□□□□□ -0.75
IFT43-209ENST00000555305 LINC00612Q8N6U2 182 aa10.37□□□□□ -0.75
IFT43-209ENST00000555305 ZNRF2Q8NHG8 242 aa10.37□□□□□ -0.75
IFT43-209ENST00000555305 PRADC1Q9BSG0 188 aa10.37□□□□□ -0.75
IFT43-209ENST00000555305 TIMM21Q9BVV7 248 aa10.37□□□□□ -0.75
IFT43-209ENST00000555305 TRGV4A0A0C4DH28 118 aa10.37□□□□□ -0.75
IFT43-209ENST00000555305 LYRM9A8MSI8 78 aa10.37□□□□□ -0.75
IFT43-209ENST00000555305 SLC25A29Q8N8R3 303 aa10.37□□□□□ -0.75
IFT43-209ENST00000555305 SPATA3Q8NHX4 192 aa10.37□□□□□ -0.75
IFT43-209ENST00000555305 HIGD1BQ9P298 99 aa10.37□□□□□ -0.75
IFT43-209ENST00000555305 F8P00451 2351 aa10.36□□□□□ -0.75
IFT43-209ENST00000555305 UBE2D3P61077 147 aa10.36□□□□□ -0.75
IFT43-209ENST00000555305 UBE2D2P62837 147 aa10.36□□□□□ -0.75
IFT43-209ENST00000555305 GAGE1Q13065 139 aa10.36□□□□□ -0.75
IFT43-209ENST00000555305 BATFQ16520 125 aa10.36□□□□□ -0.75
IFT43-209ENST00000555305 NFE4Q86UQ8 179 aa10.36□□□□□ -0.75
IFT43-209ENST00000555305 OR11H2Q8NH07 326 aa10.36□□□□□ -0.75
IFT43-209ENST00000555305 CHCHD7Q9BUK0 85 aa10.36□□□□□ -0.75
IFT43-209ENST00000555305 GTSF1LQ9H1H1 148 aa10.36□□□□□ -0.75
IFT43-209ENST00000555305 X6R8D5 127 aa10.36□□□□□ -0.75
IFT43-209ENST00000555305 BAHCC1Q9P281 2608 aa10.36□□□□□ -0.75
IFT43-209ENST00000555305 IGLV4-3A0A075B6K6 122 aa10.35□□□□□ -0.75
IFT43-209ENST00000555305 C11orf86A6NJI1 115 aa10.35□□□□□ -0.75
IFT43-209ENST00000555305 E9PLD3 99 aa10.35□□□□□ -0.75
IFT43-209ENST00000555305 IGLV4-69A0A075B6H9 119 aa10.34□□□□□ -0.75
IFT43-209ENST00000555305 MIFP14174 115 aa10.34□□□□□ -0.75
IFT43-209ENST00000555305 MRPS36P82909 103 aaKnown RBP10.34□□□□□ -0.75
IFT43-209ENST00000555305 C2orf91Q6ZV80 131 aa10.34□□□□□ -0.75
IFT43-209ENST00000555305 H7C423 109 aa10.34□□□□□ -0.75
IFT43-209ENST00000555305 HINT1P49773 126 aaPredicted RBP10.34□□□□□ -0.75
IFT43-209ENST00000555305 HSD52Q0P140 79 aa10.34□□□□□ -0.75
IFT43-209ENST00000555305 PCP2Q8IVA1 136 aa10.34□□□□□ -0.75
IFT43-209ENST00000555305 AMELXQ99217 191 aa10.34□□□□□ -0.75
IFT43-209ENST00000555305 UBE2D4Q9Y2X8 147 aa10.34□□□□□ -0.75
IFT43-209ENST00000555305 CSDC2Q9Y534 153 aaKnown RBP10.34□□□□□ -0.75
IFT43-209ENST00000555305 MPV17L2Q567V2 206 aa10.33□□□□□ -0.76
IFT43-209ENST00000555305 DEFB104AQ8WTQ1 72 aa10.33□□□□□ -0.76
IFT43-209ENST00000555305 PHLDA1Q8WV24 401 aaPredicted RBP10.33□□□□□ -0.76
IFT43-209ENST00000555305 NACAE9PAV3 2078 aa10.32□□□□□ -0.76
IFT43-209ENST00000555305 IGKV2D-26A0A0A0MRZ7 120 aa10.32□□□□□ -0.76
IFT43-209ENST00000555305 EMP1P54849 157 aa10.32□□□□□ -0.76
IFT43-209ENST00000555305 SEC11AP67812 179 aa10.32□□□□□ -0.76
IFT43-209ENST00000555305 FHL2Q14192 279 aa10.32□□□□□ -0.76
IFT43-209ENST00000555305 Q9UF83 564 aa10.32□□□□□ -0.76
IFT43-209ENST00000555305 CBY1Q9Y3M2 126 aa10.32□□□□□ -0.76
IFT43-209ENST00000555305 FLNBO75369 2602 aaKnown RBP10.32□□□□□ -0.76
IFT43-209ENST00000555305 A8MZ25 164 aa10.31□□□□□ -0.76
IFT43-209ENST00000555305 IGHV4-30-4P0DP06 118 aa10.31□□□□□ -0.76
IFT43-209ENST00000555305 EGFEM1PQ0D2K5 195 aa10.31□□□□□ -0.76
IFT43-209ENST00000555305 BVES-AS1Q5T3Y7 98 aa10.31□□□□□ -0.76
IFT43-209ENST00000555305 DGAT2L7PQ6IED9 249 aa10.31□□□□□ -0.76
IFT43-209ENST00000555305 TRAV8-6A0A0B4J262 113 aa10.31□□□□□ -0.76
IFT43-209ENST00000555305 IGHV3-38A0A0C4DH36 116 aa10.31□□□□□ -0.76
IFT43-209ENST00000555305 TEX48A0A1B0GUV7 120 aa10.31□□□□□ -0.76
IFT43-209ENST00000555305 GAGE12JA6NER3 117 aa10.31□□□□□ -0.76
IFT43-209ENST00000555305 GAGE4Q13068 117 aa10.31□□□□□ -0.76
IFT43-209ENST00000555305 GAGE5Q13069 117 aa10.31□□□□□ -0.76
IFT43-209ENST00000555305 DEFB135Q30KP9 77 aa10.31□□□□□ -0.76
IFT43-209ENST00000555305 GAGE13Q4V321 117 aa10.31□□□□□ -0.76
IFT43-209ENST00000555305 TMEM170BQ5T4T1 132 aa10.31□□□□□ -0.76
IFT43-209ENST00000555305 CHAC1Q9BUX1 264 aa10.31□□□□□ -0.76
IFT43-209ENST00000555305 MYMXA0A1B0GTQ4 84 aa10.3□□□□□ -0.76
IFT43-209ENST00000555305 DEFB130BP0DP73 79 aa10.3□□□□□ -0.76
IFT43-209ENST00000555305 DEFB130AP0DP74 79 aa10.3□□□□□ -0.76
IFT43-209ENST00000555305 TAL2Q16559 108 aa10.3□□□□□ -0.76
IFT43-209ENST00000555305 RNF183Q96D59 192 aa10.3□□□□□ -0.76
IFT43-209ENST00000555305 TRBV25-1A0A075B6N4 114 aa10.29□□□□□ -0.76
IFT43-209ENST00000555305 TCTAP57738 103 aa10.29□□□□□ -0.76
IFT43-209ENST00000555305 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.29□□□□□ -0.76
IFT43-209ENST00000555305 IGKV2-29A2NJV5 120 aaPredicted RBP10.29□□□□□ -0.76
IFT43-209ENST00000555305 A6NDN8 102 aa10.29□□□□□ -0.76
IFT43-209ENST00000555305 UBE2L6O14933 153 aa10.29□□□□□ -0.76
IFT43-209ENST00000555305 OPRPNQ99935 248 aaPredicted RBP10.29□□□□□ -0.76
IFT43-209ENST00000555305 TMEM243Q9BU79 118 aa10.29□□□□□ -0.76
IFT43-209ENST00000555305 TP73-AS1Q9UF72 201 aa10.29□□□□□ -0.76
IFT43-209ENST00000555305 TINCRA0A1B0GVN0 87 aa10.28□□□□□ -0.76
IFT43-209ENST00000555305 ZNF25P17030 456 aaPredicted RBP10.28□□□□□ -0.76
IFT43-209ENST00000555305 FAM222AQ5U5X8 452 aa10.28□□□□□ -0.76
IFT43-209ENST00000555305 PRO0255Q9UI72 69 aa10.28□□□□□ -0.76
IFT43-209ENST00000555305 TEP1Q99973 2627 aaKnown RBP10.27□□□□□ -0.76
IFT43-209ENST00000555305 LINC00694P0DN24 101 aa10.27□□□□□ -0.77
IFT43-209ENST00000555305 TMEM101Q96IK0 257 aa10.27□□□□□ -0.77
IFT43-209ENST00000555305 JMJD1CQ15652 2540 aa10.26□□□□□ -0.77
IFT43-209ENST00000555305 IGHV4-28A0A0C4DH34 117 aa10.26□□□□□ -0.77
IFT43-209ENST00000555305 SPART-AS1P0CW21 52 aa10.26□□□□□ -0.77
IFT43-209ENST00000555305 PRIMA1Q86XR5 153 aa10.26□□□□□ -0.77
IFT43-209ENST00000555305 SBSPONQ8IVN8 264 aa10.26□□□□□ -0.77
IFT43-209ENST00000555305 ORAOV1Q8WV07 137 aa10.26□□□□□ -0.77
IFT43-209ENST00000555305 TMEM223A0PJW6 202 aa10.26□□□□□ -0.77
IFT43-209ENST00000555305 AMMECR1LQ6DCA0 310 aa10.26□□□□□ -0.77
IFT43-209ENST00000555305 Q8NAQ8 132 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms