RNA–Protein interactions for RNA: ENST00000554805.6

SYNE2-213, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-213ENST00000554805 M0QXV9 152 aa7.04□□□□□ -1.28
SYNE2-213ENST00000554805 DEFB131AP59861 70 aa7.04□□□□□ -1.28
SYNE2-213ENST00000554805 CKS1BP61024 79 aa7.04□□□□□ -1.28
SYNE2-213ENST00000554805 NPC2P61916 151 aa7.04□□□□□ -1.28
SYNE2-213ENST00000554805 CEMP1Q6PRD7 247 aaPredicted RBP7.04□□□□□ -1.28
SYNE2-213ENST00000554805 NFE4Q86UQ8 179 aa7.04□□□□□ -1.28
SYNE2-213ENST00000554805 ZNF843Q8N446 348 aa7.04□□□□□ -1.28
SYNE2-213ENST00000554805 ITPR3Q14573 2671 aa7.04□□□□□ -1.28
SYNE2-213ENST00000554805 BRI3O95415 125 aa7.03□□□□□ -1.28
SYNE2-213ENST00000554805 PRM2P04554 102 aa7.03□□□□□ -1.28
SYNE2-213ENST00000554805 PSMB8P28062 276 aa7.03□□□□□ -1.28
SYNE2-213ENST00000554805 PROK1P58294 105 aa7.03□□□□□ -1.28
SYNE2-213ENST00000554805 RHODO00212 210 aa7.03□□□□□ -1.28
SYNE2-213ENST00000554805 ZNF22P17026 224 aaPredicted RBP7.03□□□□□ -1.28
SYNE2-213ENST00000554805 UBE2D3P61077 147 aa7.03□□□□□ -1.28
SYNE2-213ENST00000554805 UBE2D2P62837 147 aa7.03□□□□□ -1.28
SYNE2-213ENST00000554805 ZNF580Q9UK33 172 aa7.03□□□□□ -1.28
SYNE2-213ENST00000554805 TMEM223A0PJW6 202 aa7.03□□□□□ -1.28
SYNE2-213ENST00000554805 HOXD3P31249 432 aaPredicted RBP7.03□□□□□ -1.28
SYNE2-213ENST00000554805 TCTEX1D4Q5JR98 221 aa7.03□□□□□ -1.28
SYNE2-213ENST00000554805 TEN1Q86WV5 123 aa7.03□□□□□ -1.28
SYNE2-213ENST00000554805 NSUN5P1Q3KNT7 163 aa7.02□□□□□ -1.29
SYNE2-213ENST00000554805 TIMM21Q9BVV7 248 aa7.02□□□□□ -1.29
SYNE2-213ENST00000554805 IGLV4-3A0A075B6K6 122 aa7.02□□□□□ -1.29
SYNE2-213ENST00000554805 KRTAP10-9P60411 292 aa7.02□□□□□ -1.29
SYNE2-213ENST00000554805 CFHR3Q02985 330 aa7.02□□□□□ -1.29
SYNE2-213ENST00000554805 DEFB136Q30KP8 78 aa7.02□□□□□ -1.29
SYNE2-213ENST00000554805 ANKRD29Q8N6D5 301 aa7.02□□□□□ -1.29
SYNE2-213ENST00000554805 TRAV8-3A0A0A6YYJ7 113 aa7.02□□□□□ -1.29
SYNE2-213ENST00000554805 MT-ATP8P03928 68 aa7.02□□□□□ -1.29
SYNE2-213ENST00000554805 ATP6V0E2Q8NHE4 81 aa7.02□□□□□ -1.29
SYNE2-213ENST00000554805 IGHV3-38A0A0C4DH36 116 aa7.01□□□□□ -1.29
SYNE2-213ENST00000554805 SLC25A20O43772 301 aa7.01□□□□□ -1.29
SYNE2-213ENST00000554805 DGAT2L7PQ6IED9 249 aa7.01□□□□□ -1.29
SYNE2-213ENST00000554805 ODF3Q96PU9 254 aa7.01□□□□□ -1.29
SYNE2-213ENST00000554805 CARD19Q96LW7 228 aa7□□□□□ -1.29
SYNE2-213ENST00000554805 LINC01587Q99440 93 aa7□□□□□ -1.29
SYNE2-213ENST00000554805 GEMIN7Q9H840 131 aaKnown RBP7□□□□□ -1.29
SYNE2-213ENST00000554805 GCN1Q92616 2671 aaKnown RBP7□□□□□ -1.29
SYNE2-213ENST00000554805 TRAV16A0A0A6YYK6 109 aaPredicted RBP7□□□□□ -1.29
SYNE2-213ENST00000554805 IGHV3-33P01772 117 aa7□□□□□ -1.29
SYNE2-213ENST00000554805 IGHV3-30-3P0DP02 117 aa7□□□□□ -1.29
SYNE2-213ENST00000554805 SLURP1P55000 103 aa7□□□□□ -1.29
SYNE2-213ENST00000554805 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7□□□□□ -1.29
SYNE2-213ENST00000554805 IGHV3OR16-12A0A075B7B8 117 aa7□□□□□ -1.29
SYNE2-213ENST00000554805 IGKV2-29A2NJV5 120 aaPredicted RBP7□□□□□ -1.29
SYNE2-213ENST00000554805 LINC01356Q8N9X3 169 aa7□□□□□ -1.29
SYNE2-213ENST00000554805 A0A0J9YXY3 114 aa6.99□□□□□ -1.29
SYNE2-213ENST00000554805 C11orf44Q8N8P7 122 aa6.99□□□□□ -1.29
SYNE2-213ENST00000554805 DYNLRB2Q8TF09 96 aa6.99□□□□□ -1.29
SYNE2-213ENST00000554805 AMELXQ99217 191 aa6.99□□□□□ -1.29
SYNE2-213ENST00000554805 NDUFA12Q9UI09 145 aa6.99□□□□□ -1.29
SYNE2-213ENST00000554805 CDIP1Q9H305 208 aa6.99□□□□□ -1.29
SYNE2-213ENST00000554805 A8MZ25 164 aa6.99□□□□□ -1.29
SYNE2-213ENST00000554805 GATA3P23771 443 aa6.98□□□□□ -1.29
SYNE2-213ENST00000554805 CRYBA4P53673 196 aa6.98□□□□□ -1.29
SYNE2-213ENST00000554805 XGP55808 180 aa6.98□□□□□ -1.29
SYNE2-213ENST00000554805 Q6ZUT4 128 aa6.98□□□□□ -1.29
SYNE2-213ENST00000554805 NTN5Q8WTR8 489 aaPredicted RBP6.98□□□□□ -1.29
SYNE2-213ENST00000554805 TENM4Q6N022 2769 aa6.98□□□□□ -1.29
SYNE2-213ENST00000554805 A0A0U1RRA0 63 aa6.98□□□□□ -1.29
SYNE2-213ENST00000554805 M0R2P5 195 aa6.98□□□□□ -1.29
SYNE2-213ENST00000554805 ATXN8Q156A1 80 aa6.98□□□□□ -1.29
SYNE2-213ENST00000554805 C18orf65Q6ZTR6 163 aa6.98□□□□□ -1.29
SYNE2-213ENST00000554805 TMEM263Q8WUH6 116 aaKnown RBP6.98□□□□□ -1.29
SYNE2-213ENST00000554805 APCP25054 2843 aa6.98□□□□□ -1.29
SYNE2-213ENST00000554805 ELANEP08246 267 aa6.97□□□□□ -1.29
SYNE2-213ENST00000554805 RBMY1A1P0DJD3 496 aaKnown RBP6.97□□□□□ -1.29
SYNE2-213ENST00000554805 RBMY1CP0DJD4 496 aa6.97□□□□□ -1.29
SYNE2-213ENST00000554805 RBMY1FQ15415 496 aaKnown RBP6.97□□□□□ -1.29
SYNE2-213ENST00000554805 Q9UF83 564 aa6.97□□□□□ -1.29
SYNE2-213ENST00000554805 NBEAL2Q6ZNJ1 2754 aa6.97□□□□□ -1.29
SYNE2-213ENST00000554805 ZNF415Q09FC8 603 aa6.97□□□□□ -1.29
SYNE2-213ENST00000554805 VPREB3Q9UKI3 123 aa6.97□□□□□ -1.29
SYNE2-213ENST00000554805 COX6CP09669 75 aa6.96□□□□□ -1.29
SYNE2-213ENST00000554805 FHL3Q13643 280 aa6.96□□□□□ -1.29
SYNE2-213ENST00000554805 A0A0B4J2C4 111 aa6.96□□□□□ -1.3
SYNE2-213ENST00000554805 TMEM262E9PQX1 116 aa6.96□□□□□ -1.3
SYNE2-213ENST00000554805 DSCR9P59020 149 aa6.96□□□□□ -1.3
SYNE2-213ENST00000554805 LINC01620Q4KN68 170 aa6.96□□□□□ -1.3
SYNE2-213ENST00000554805 DAND5Q8N907 189 aa6.96□□□□□ -1.3
SYNE2-213ENST00000554805 TEP1Q99973 2627 aaKnown RBP6.96□□□□□ -1.3
SYNE2-213ENST00000554805 NBPF19A0A087WUL8 3843 aa6.96□□□□□ -1.3
SYNE2-213ENST00000554805 TMEM89A2RUT3 159 aa6.96□□□□□ -1.3
SYNE2-213ENST00000554805 TMEM61Q8N0U2 210 aa6.96□□□□□ -1.3
SYNE2-213ENST00000554805 ZNF625Q96I27 306 aaPredicted RBP6.96□□□□□ -1.3
SYNE2-213ENST00000554805 UBE2E2Q96LR5 201 aa6.96□□□□□ -1.3
SYNE2-213ENST00000554805 IGHV1-58A0A0C4DH39 117 aa6.95□□□□□ -1.3
SYNE2-213ENST00000554805 H3BMM0 161 aa6.95□□□□□ -1.3
SYNE2-213ENST00000554805 EIF4EBP3O60516 100 aaPredicted RBP6.95□□□□□ -1.3
SYNE2-213ENST00000554805 Q6ZSN1 163 aa6.95□□□□□ -1.3
SYNE2-213ENST00000554805 XCL2Q9UBD3 114 aa6.95□□□□□ -1.3
SYNE2-213ENST00000554805 C2orf82Q6UX34 121 aa6.95□□□□□ -1.3
SYNE2-213ENST00000554805 TRIAP1O43715 76 aa6.95□□□□□ -1.3
SYNE2-213ENST00000554805 LINC00467Q9BRT7 94 aa6.95□□□□□ -1.3
SYNE2-213ENST00000554805 UNC79Q9P2D8 2635 aa6.94□□□□□ -1.3
SYNE2-213ENST00000554805 IGHV3-53P01767 116 aa6.94□□□□□ -1.3
SYNE2-213ENST00000554805 ADAMTSL4-AS1Q5T5F5 129 aa6.94□□□□□ -1.3
SYNE2-213ENST00000554805 Q6ZSV7 163 aa6.94□□□□□ -1.3
SYNE2-213ENST00000554805 TEX29Q8N6K0 151 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms