RNA–Protein interactions for RNA: ENST00000554731.1

RDH11-207, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 888 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-207ENST00000554731 TRGC1P0CF51 173 aa7.89□□□□□ -1.15
RDH11-207ENST00000554731 AMTP48728 403 aa7.89□□□□□ -1.15
RDH11-207ENST00000554731 COTL1Q14019 142 aa7.89□□□□□ -1.15
RDH11-207ENST00000554731 CENPWQ5EE01 88 aa7.89□□□□□ -1.15
RDH11-207ENST00000554731 C11orf52Q96A22 123 aa7.89□□□□□ -1.15
RDH11-207ENST00000554731 GAGE12HA6NDE8 117 aa7.88□□□□□ -1.15
RDH11-207ENST00000554731 C15orf56Q8N910 161 aa7.88□□□□□ -1.15
RDH11-207ENST00000554731 MANBALQ9NQG1 85 aa7.88□□□□□ -1.15
RDH11-207ENST00000554731 GNG13Q9P2W3 67 aa7.88□□□□□ -1.15
RDH11-207ENST00000554731 IGKV3OR2-268A0A0C4DH90 116 aa7.87□□□□□ -1.15
RDH11-207ENST00000554731 KANTRA0A1W2PQU2 76 aa7.87□□□□□ -1.15
RDH11-207ENST00000554731 C19orf71A6NCJ1 209 aa7.87□□□□□ -1.15
RDH11-207ENST00000554731 IFNA1P01562 189 aa7.87□□□□□ -1.15
RDH11-207ENST00000554731 RPS10P46783 165 aaKnown RBP7.87□□□□□ -1.15
RDH11-207ENST00000554731 COX6A2Q02221 97 aa7.87□□□□□ -1.15
RDH11-207ENST00000554731 LYZL1Q6UWQ5 148 aa7.87□□□□□ -1.15
RDH11-207ENST00000554731 BCL2L11O43521 198 aa7.86□□□□□ -1.15
RDH11-207ENST00000554731 NDUFS6O75380 124 aaKnown RBP7.86□□□□□ -1.15
RDH11-207ENST00000554731 NTF3P20783 257 aa7.86□□□□□ -1.15
RDH11-207ENST00000554731 GNG4P50150 75 aa7.86□□□□□ -1.15
RDH11-207ENST00000554731 EIF5AP63241 154 aaKnown RBP7.86□□□□□ -1.15
RDH11-207ENST00000554731 CCL20P78556 96 aa7.86□□□□□ -1.15
RDH11-207ENST00000554731 MAJINQ3KP22 176 aa7.86□□□□□ -1.15
RDH11-207ENST00000554731 HIGD2BQ4VC39 106 aa7.86□□□□□ -1.15
RDH11-207ENST00000554731 GTSF1Q8WW33 167 aa7.86□□□□□ -1.15
RDH11-207ENST00000554731 SMIM12Q96EX1 92 aa7.86□□□□□ -1.15
RDH11-207ENST00000554731 IGKV2-24A0A0C4DH68 120 aa7.85□□□□□ -1.15
RDH11-207ENST00000554731 RAB19A4D1S5 217 aa7.85□□□□□ -1.15
RDH11-207ENST00000554731 HMSDA8MTL9 139 aa7.85□□□□□ -1.15
RDH11-207ENST00000554731 RGS21Q2M5E4 152 aa7.85□□□□□ -1.15
RDH11-207ENST00000554731 AMMECR1LQ6DCA0 310 aa7.85□□□□□ -1.15
RDH11-207ENST00000554731 PRSS3P2Q8NHM4 247 aa7.85□□□□□ -1.15
RDH11-207ENST00000554731 LINC01600Q96MT4 127 aa7.85□□□□□ -1.15
RDH11-207ENST00000554731 BIN3Q9NQY0 253 aa7.85□□□□□ -1.15
RDH11-207ENST00000554731 TNXBP22105 4242 aa7.84□□□□□ -1.15
RDH11-207ENST00000554731 LRP2P98164 4655 aa7.84□□□□□ -1.15
RDH11-207ENST00000554731 TRAV1-1A0A0B4J248 108 aa7.84□□□□□ -1.15
RDH11-207ENST00000554731 LCE2BO14633 110 aa7.84□□□□□ -1.15
RDH11-207ENST00000554731 PRR3P79522 188 aaKnown RBP7.84□□□□□ -1.15
RDH11-207ENST00000554731 STPG4Q8N801 248 aa7.84□□□□□ -1.15
RDH11-207ENST00000554731 CHCHD10Q8WYQ3 142 aaPredicted RBP7.84□□□□□ -1.15
RDH11-207ENST00000554731 GVQW2A0A096LPI5 108 aaPredicted RBP7.83□□□□□ -1.16
RDH11-207ENST00000554731 TEX46H3BTG2 121 aa7.83□□□□□ -1.16
RDH11-207ENST00000554731 CTRLP40313 264 aa7.83□□□□□ -1.16
RDH11-207ENST00000554731 TWIST1Q15672 202 aa7.83□□□□□ -1.16
RDH11-207ENST00000554731 C9orf62Q8N4C0 152 aa7.83□□□□□ -1.16
RDH11-207ENST00000554731 PDE6DO43924 150 aa7.82□□□□□ -1.16
RDH11-207ENST00000554731 NCR2O95944 276 aa7.82□□□□□ -1.16
RDH11-207ENST00000554731 RNASEKQ6P5S7 137 aaKnown RBP7.82□□□□□ -1.16
RDH11-207ENST00000554731 GATD1Q8NB37 220 aa7.82□□□□□ -1.16
RDH11-207ENST00000554731 LYPD6BQ8NI32 183 aa7.82□□□□□ -1.16
RDH11-207ENST00000554731 MED9Q9NWA0 146 aa7.82□□□□□ -1.16
RDH11-207ENST00000554731 TRBV20OR9-2A0A075B6H5 130 aa7.81□□□□□ -1.16
RDH11-207ENST00000554731 A0A096LNI7 61 aa7.81□□□□□ -1.16
RDH11-207ENST00000554731 TRAV26-2A0A0B4J265 109 aa7.81□□□□□ -1.16
RDH11-207ENST00000554731 H7C423 109 aa7.81□□□□□ -1.16
RDH11-207ENST00000554731 APCSP02743 223 aa7.81□□□□□ -1.16
RDH11-207ENST00000554731 MEF2BQ02080 365 aaPredicted RBP7.81□□□□□ -1.16
RDH11-207ENST00000554731 Q6ZNX1 250 aa7.81□□□□□ -1.16
RDH11-207ENST00000554731 NUDT10Q8NFP7 164 aa7.81□□□□□ -1.16
RDH11-207ENST00000554731 NUDT11Q96G61 164 aa7.81□□□□□ -1.16
RDH11-207ENST00000554731 CNFNQ9BYD5 112 aa7.81□□□□□ -1.16
RDH11-207ENST00000554731 LINC00474Q9P2X8 69 aa7.81□□□□□ -1.16
RDH11-207ENST00000554731 PKIGQ9Y2B9 76 aa7.81□□□□□ -1.16
RDH11-207ENST00000554731 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.8□□□□□ -1.16
RDH11-207ENST00000554731 IGKV2-29A2NJV5 120 aaPredicted RBP7.8□□□□□ -1.16
RDH11-207ENST00000554731 FGF6P10767 208 aa7.8□□□□□ -1.16
RDH11-207ENST00000554731 FOXI1Q12951 378 aa7.8□□□□□ -1.16
RDH11-207ENST00000554731 REG3GQ6UW15 175 aa7.8□□□□□ -1.16
RDH11-207ENST00000554731 A0A0J9YXV3 536 aa7.79□□□□□ -1.16
RDH11-207ENST00000554731 ODF1Q14990 250 aa7.79□□□□□ -1.16
RDH11-207ENST00000554731 EIF5AL1Q6IS14 154 aaKnown RBP7.79□□□□□ -1.16
RDH11-207ENST00000554731 TEX261Q6UWH6 196 aa7.79□□□□□ -1.16
RDH11-207ENST00000554731 SPINK6Q6UWN8 80 aa7.79□□□□□ -1.16
RDH11-207ENST00000554731 SMIM15Q7Z3B0 74 aa7.79□□□□□ -1.16
RDH11-207ENST00000554731 RPL39LQ96EH5 51 aaKnown RBP7.79□□□□□ -1.16
RDH11-207ENST00000554731 RPP21Q9H633 154 aaKnown RBP7.79□□□□□ -1.16
RDH11-207ENST00000554731 SDHAF1A6NFY7 115 aa7.78□□□□□ -1.16
RDH11-207ENST00000554731 BCL2P10415 239 aa7.78□□□□□ -1.16
RDH11-207ENST00000554731 ZNF25P17030 456 aaPredicted RBP7.78□□□□□ -1.16
RDH11-207ENST00000554731 XCL1P47992 114 aa7.78□□□□□ -1.16
RDH11-207ENST00000554731 OR5A1Q8NGJ0 315 aa7.78□□□□□ -1.16
RDH11-207ENST00000554731 BTF3L4Q96K17 158 aa7.78□□□□□ -1.16
RDH11-207ENST00000554731 RNF213Q63HN8 5207 aa7.77□□□□□ -1.16
RDH11-207ENST00000554731 IGHV1-58A0A0C4DH39 117 aa7.77□□□□□ -1.17
RDH11-207ENST00000554731 KRTAP10-8P60410 259 aa7.77□□□□□ -1.17
RDH11-207ENST00000554731 TMEM101Q96IK0 257 aa7.77□□□□□ -1.17
RDH11-207ENST00000554731 CARD19Q96LW7 228 aa7.77□□□□□ -1.17
RDH11-207ENST00000554731 RNASE7Q9H1E1 156 aaKnown RBP7.77□□□□□ -1.17
RDH11-207ENST00000554731 LINC00959A0A1B0GUT2 108 aa7.76□□□□□ -1.17
RDH11-207ENST00000554731 I3L3M4 83 aa7.76□□□□□ -1.17
RDH11-207ENST00000554731 CCL25O15444 150 aa7.76□□□□□ -1.17
RDH11-207ENST00000554731 PMCHP20382 165 aa7.76□□□□□ -1.17
RDH11-207ENST00000554731 Q6ZRP5 223 aa7.76□□□□□ -1.17
RDH11-207ENST00000554731 LINC00526Q96FQ7 95 aa7.76□□□□□ -1.17
RDH11-207ENST00000554731 FAM231BA6NCW3 169 aa7.75□□□□□ -1.17
RDH11-207ENST00000554731 K7EN84 100 aa7.75□□□□□ -1.17
RDH11-207ENST00000554731 TAGLN2P37802 199 aaKnown RBP7.75□□□□□ -1.17
RDH11-207ENST00000554731 FOXA3P55318 350 aaPredicted RBP7.75□□□□□ -1.17
RDH11-207ENST00000554731 ZNF561-AS1K7EIQ3 104 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms