RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 H3BUT2 72 aa2.4□□□□□ -2.02
SEC23A-207ENST00000554615 ATP5G1P05496 136 aa2.4□□□□□ -2.02
SEC23A-207ENST00000554615 ACYP1P07311 99 aa2.4□□□□□ -2.02
SEC23A-207ENST00000554615 BLCAPP62952 87 aa2.4□□□□□ -2.02
SEC23A-207ENST00000554615 SOSTDC1Q6X4U4 206 aa2.4□□□□□ -2.02
SEC23A-207ENST00000554615 Q6ZUT4 128 aa2.4□□□□□ -2.02
SEC23A-207ENST00000554615 C14orf178Q8N769 122 aaPredicted RBP2.4□□□□□ -2.02
SEC23A-207ENST00000554615 CCL19Q99731 98 aa2.4□□□□□ -2.02
SEC23A-207ENST00000554615 VPS13BQ7Z7G8 4022 aa2.4□□□□□ -2.02
SEC23A-207ENST00000554615 AGRNO00468 2067 aa2.4□□□□□ -2.02
SEC23A-207ENST00000554615 RTTNQ86VV8 2226 aa2.4□□□□□ -2.03
SEC23A-207ENST00000554615 LRBAP50851 2863 aa2.4□□□□□ -2.03
SEC23A-207ENST00000554615 CRLF1O75462 422 aa2.4□□□□□ -2.03
SEC23A-207ENST00000554615 COX17Q14061 63 aa2.4□□□□□ -2.03
SEC23A-207ENST00000554615 WFDC2Q14508 124 aa2.4□□□□□ -2.03
SEC23A-207ENST00000554615 KIAA0087Q14695 138 aa2.4□□□□□ -2.03
SEC23A-207ENST00000554615 C9orf66Q5T8R8 295 aa2.4□□□□□ -2.03
SEC23A-207ENST00000554615 TMEM101Q96IK0 257 aa2.4□□□□□ -2.03
SEC23A-207ENST00000554615 C2orf48Q96LS8 159 aa2.4□□□□□ -2.03
SEC23A-207ENST00000554615 PRR34Q9NV39 138 aa2.4□□□□□ -2.03
SEC23A-207ENST00000554615 IGKV2-28A0A075B6P5 120 aa2.4□□□□□ -2.03
SEC23A-207ENST00000554615 IGHV3OR16-9A0A0B4J2B5 98 aa2.4□□□□□ -2.03
SEC23A-207ENST00000554615 TMEM262E9PQX1 116 aa2.4□□□□□ -2.03
SEC23A-207ENST00000554615 H3BUX3 64 aa2.4□□□□□ -2.03
SEC23A-207ENST00000554615 IGKV2D-28P01615 120 aa2.4□□□□□ -2.03
SEC23A-207ENST00000554615 HOXD3P31249 432 aaPredicted RBP2.4□□□□□ -2.03
SEC23A-207ENST00000554615 LYRM7Q5U5X0 104 aa2.4□□□□□ -2.03
SEC23A-207ENST00000554615 KRTAP19-1Q8IUB9 90 aa2.4□□□□□ -2.03
SEC23A-207ENST00000554615 MTURNQ8N3F0 131 aa2.4□□□□□ -2.03
SEC23A-207ENST00000554615 PLA2G2DQ9UNK4 145 aa2.4□□□□□ -2.03
SEC23A-207ENST00000554615 IGLV5-37A0A075B6J1 123 aa2.39□□□□□ -2.03
SEC23A-207ENST00000554615 A0A087WZ39 114 aa2.39□□□□□ -2.03
SEC23A-207ENST00000554615 SMIM9A6NGZ8 99 aa2.39□□□□□ -2.03
SEC23A-207ENST00000554615 GNLYP22749 145 aa2.39□□□□□ -2.03
SEC23A-207ENST00000554615 UQCRFS1P47985 274 aa2.39□□□□□ -2.03
SEC23A-207ENST00000554615 DEFB113Q30KQ7 82 aa2.39□□□□□ -2.03
SEC23A-207ENST00000554615 GAGE13Q4V321 117 aa2.39□□□□□ -2.03
SEC23A-207ENST00000554615 TMEM170BQ5T4T1 132 aa2.39□□□□□ -2.03
SEC23A-207ENST00000554615 RAX2Q96IS3 184 aa2.39□□□□□ -2.03
SEC23A-207ENST00000554615 UPK3BQ9BT76 320 aa2.39□□□□□ -2.03
SEC23A-207ENST00000554615 MCRIP2Q9BUT9 160 aaKnown RBP2.39□□□□□ -2.03
SEC23A-207ENST00000554615 TRBV10-3A0A0K0K1G6 114 aa2.39□□□□□ -2.03
SEC23A-207ENST00000554615 K7ERJ3 54 aa2.39□□□□□ -2.03
SEC23A-207ENST00000554615 IGHV3-23P01764 117 aa2.39□□□□□ -2.03
SEC23A-207ENST00000554615 ZNF688P0C7X2 276 aa2.39□□□□□ -2.03
SEC23A-207ENST00000554615 GCSHP23434 173 aa2.39□□□□□ -2.03
SEC23A-207ENST00000554615 WFDC3Q8IUB2 231 aa2.39□□□□□ -2.03
SEC23A-207ENST00000554615 Q96MF0 132 aa2.39□□□□□ -2.03
SEC23A-207ENST00000554615 YAE1D1Q9NRH1 226 aa2.39□□□□□ -2.03
SEC23A-207ENST00000554615 PEMTQ9UBM1 199 aa2.39□□□□□ -2.03
SEC23A-207ENST00000554615 HMCN1Q96RW7 5635 aa2.39□□□□□ -2.03
SEC23A-207ENST00000554615 ADGRG4Q8IZF6 3080 aa2.39□□□□□ -2.03
SEC23A-207ENST00000554615 TRIAP1O43715 76 aa2.39□□□□□ -2.03
SEC23A-207ENST00000554615 PCP4P48539 62 aa2.39□□□□□ -2.03
SEC23A-207ENST00000554615 TCTAP57738 103 aa2.39□□□□□ -2.03
SEC23A-207ENST00000554615 PROK1P58294 105 aa2.39□□□□□ -2.03
SEC23A-207ENST00000554615 KRTAP10-3P60369 221 aa2.39□□□□□ -2.03
SEC23A-207ENST00000554615 HERVK_113P63121 156 aa2.39□□□□□ -2.03
SEC23A-207ENST00000554615 RPL24P83731 157 aaKnown RBP2.39□□□□□ -2.03
SEC23A-207ENST00000554615 FHL2Q14192 279 aa2.39□□□□□ -2.03
SEC23A-207ENST00000554615 KRTAP4-5Q9BYR2 181 aa2.39□□□□□ -2.03
SEC23A-207ENST00000554615 TTTY13Q9BZ97 58 aa2.39□□□□□ -2.03
SEC23A-207ENST00000554615 LOC110117498A0A087WWA1 95 aa2.38□□□□□ -2.03
SEC23A-207ENST00000554615 COX7A2LO14548 114 aa2.38□□□□□ -2.03
SEC23A-207ENST00000554615 XGP55808 180 aa2.38□□□□□ -2.03
SEC23A-207ENST00000554615 HERVK_113P61574 105 aa2.38□□□□□ -2.03
SEC23A-207ENST00000554615 RPL39P62891 51 aaKnown RBP2.38□□□□□ -2.03
SEC23A-207ENST00000554615 HIST2H2BCQ6DN03 193 aa2.38□□□□□ -2.03
SEC23A-207ENST00000554615 ZNF843Q8N446 348 aa2.38□□□□□ -2.03
SEC23A-207ENST00000554615 C16orf74Q96GX8 76 aa2.38□□□□□ -2.03
SEC23A-207ENST00000554615 MRPL16Q9NX20 251 aaKnown RBP2.38□□□□□ -2.03
SEC23A-207ENST00000554615 A0A0J9YWU9 116 aa2.38□□□□□ -2.03
SEC23A-207ENST00000554615 LOC389332A0A1B0GUA5 103 aa2.38□□□□□ -2.03
SEC23A-207ENST00000554615 PLXNB1O43157 2135 aa2.38□□□□□ -2.03
SEC23A-207ENST00000554615 IGHV4-30-4P0DP06 118 aa2.38□□□□□ -2.03
SEC23A-207ENST00000554615 SNRPD3P62318 126 aaKnown RBP2.38□□□□□ -2.03
SEC23A-207ENST00000554615 COX6A2Q02221 97 aa2.38□□□□□ -2.03
SEC23A-207ENST00000554615 SMAGPQ0VAQ4 97 aa2.38□□□□□ -2.03
SEC23A-207ENST00000554615 FOXC1Q12948 553 aa2.38□□□□□ -2.03
SEC23A-207ENST00000554615 COTL1Q14019 142 aa2.38□□□□□ -2.03
SEC23A-207ENST00000554615 PLECQ15149 4684 aaKnown RBP2.38□□□□□ -2.03
SEC23A-207ENST00000554615 Q6ZSV7 163 aa2.38□□□□□ -2.03
SEC23A-207ENST00000554615 LINC00308Q8TCZ7 52 aa2.38□□□□□ -2.03
SEC23A-207ENST00000554615 JPT2Q9H910 190 aa2.38□□□□□ -2.03
SEC23A-207ENST00000554615 PGPEP1Q9NXJ5 209 aa2.38□□□□□ -2.03
SEC23A-207ENST00000554615 ICOSQ9Y6W8 199 aa2.38□□□□□ -2.03
SEC23A-207ENST00000554615 X6R8D5 127 aa2.38□□□□□ -2.03
SEC23A-207ENST00000554615 FAT3Q8TDW7 4589 aa2.38□□□□□ -2.03
SEC23A-207ENST00000554615 K7EQD1 137 aa2.38□□□□□ -2.03
SEC23A-207ENST00000554615 ECSCRQ19T08 205 aa2.38□□□□□ -2.03
SEC23A-207ENST00000554615 LINC01620Q4KN68 170 aa2.38□□□□□ -2.03
SEC23A-207ENST00000554615 SPANXN1Q5VSR9 72 aa2.38□□□□□ -2.03
SEC23A-207ENST00000554615 PHLDA3Q9Y5J5 127 aa2.38□□□□□ -2.03
SEC23A-207ENST00000554615 TNXBP22105 4242 aa2.38□□□□□ -2.03
SEC23A-207ENST00000554615 ZNF815PA8K554 130 aa2.37□□□□□ -2.03
SEC23A-207ENST00000554615 H3BQ85 93 aa2.37□□□□□ -2.03
SEC23A-207ENST00000554615 MUSTN1Q8IVN3 82 aa2.37□□□□□ -2.03
SEC23A-207ENST00000554615 Q8IZM0 81 aa2.37□□□□□ -2.03
SEC23A-207ENST00000554615 C11orf44Q8N8P7 122 aa2.37□□□□□ -2.03
SEC23A-207ENST00000554615 WFDC9Q8NEX5 89 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms