RNA–Protein interactions for RNA: ENST00000554556.5

GABRB3-206, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-206ENST00000554556 IFNA1P01562 189 aa14.17□□□□□ -0.14
GABRB3-206ENST00000554556 GNG4P50150 75 aa14.17□□□□□ -0.14
GABRB3-206ENST00000554556 SULT1A2P50226 295 aa14.17□□□□□ -0.14
GABRB3-206ENST00000554556 COTL1Q14019 142 aa14.17□□□□□ -0.14
GABRB3-206ENST00000554556 CFAP161Q6P656 301 aa14.17□□□□□ -0.14
GABRB3-206ENST00000554556 HMCN2Q8NDA2 5059 aa14.16□□□□□ -0.14
GABRB3-206ENST00000554556 TRAV1-1A0A0B4J248 108 aa14.16□□□□□ -0.14
GABRB3-206ENST00000554556 AMTP48728 403 aa14.16□□□□□ -0.14
GABRB3-206ENST00000554556 LYZL1Q6UWQ5 148 aa14.16□□□□□ -0.14
GABRB3-206ENST00000554556 GFRA4Q9GZZ7 299 aa14.16□□□□□ -0.14
GABRB3-206ENST00000554556 RAB19A4D1S5 217 aa14.15□□□□□ -0.14
GABRB3-206ENST00000554556 SLPIP03973 132 aa14.15□□□□□ -0.14
GABRB3-206ENST00000554556 MT1HL1P0DM35 61 aa14.15□□□□□ -0.14
GABRB3-206ENST00000554556 NTF3P20783 257 aa14.15□□□□□ -0.14
GABRB3-206ENST00000554556 SPACA4Q8TDM5 124 aa14.14□□□□□ -0.15
GABRB3-206ENST00000554556 PDE6DO43924 150 aa14.13□□□□□ -0.15
GABRB3-206ENST00000554556 CHTF8P0CG12 524 aa14.13□□□□□ -0.15
GABRB3-206ENST00000554556 EIF5AL1Q6IS14 154 aaKnown RBP14.13□□□□□ -0.15
GABRB3-206ENST00000554556 C9orf62Q8N4C0 152 aa14.12□□□□□ -0.15
GABRB3-206ENST00000554556 C7orf33Q8WU49 177 aa14.12□□□□□ -0.15
GABRB3-206ENST00000554556 MED9Q9NWA0 146 aa14.12□□□□□ -0.15
GABRB3-206ENST00000554556 GAGE12HA6NDE8 117 aa14.11□□□□□ -0.15
GABRB3-206ENST00000554556 MEF2BQ02080 365 aaPredicted RBP14.11□□□□□ -0.15
GABRB3-206ENST00000554556 PLAC8Q9NZF1 115 aa14.11□□□□□ -0.15
GABRB3-206ENST00000554556 RPS10P46783 165 aaKnown RBP14.1□□□□□ -0.15
GABRB3-206ENST00000554556 TWIST1Q15672 202 aa14.1□□□□□ -0.15
GABRB3-206ENST00000554556 IGKV3OR2-268A0A0C4DH90 116 aa14.09□□□□□ -0.15
GABRB3-206ENST00000554556 AMMECR1LQ6DCA0 310 aa14.09□□□□□ -0.15
GABRB3-206ENST00000554556 C15orf56Q8N910 161 aa14.09□□□□□ -0.15
GABRB3-206ENST00000554556 CTRLP40313 264 aa14.08□□□□□ -0.16
GABRB3-206ENST00000554556 COX6A2Q02221 97 aa14.08□□□□□ -0.16
GABRB3-206ENST00000554556 NUDT10Q8NFP7 164 aa14.08□□□□□ -0.16
GABRB3-206ENST00000554556 NUDT11Q96G61 164 aa14.08□□□□□ -0.16
GABRB3-206ENST00000554556 PHOX2AO14813 284 aa14.07□□□□□ -0.16
GABRB3-206ENST00000554556 NDUFS6O75380 124 aaKnown RBP14.07□□□□□ -0.16
GABRB3-206ENST00000554556 TRBV20OR9-2A0A075B6H5 130 aa14.06□□□□□ -0.16
GABRB3-206ENST00000554556 NCR2O95944 276 aa14.06□□□□□ -0.16
GABRB3-206ENST00000554556 SMIM15Q7Z3B0 74 aa14.06□□□□□ -0.16
GABRB3-206ENST00000554556 GATD1Q8NB37 220 aa14.06□□□□□ -0.16
GABRB3-206ENST00000554556 CNFNQ9BYD5 112 aa14.06□□□□□ -0.16
GABRB3-206ENST00000554556 H7C423 109 aa14.05□□□□□ -0.16
GABRB3-206ENST00000554556 MAJINQ3KP22 176 aa14.05□□□□□ -0.16
GABRB3-206ENST00000554556 HIGD2BQ4VC39 106 aa14.05□□□□□ -0.16
GABRB3-206ENST00000554556 RNASEKQ6P5S7 137 aaKnown RBP14.05□□□□□ -0.16
GABRB3-206ENST00000554556 CHCHD10Q8WYQ3 142 aaPredicted RBP14.05□□□□□ -0.16
GABRB3-206ENST00000554556 BCL2P10415 239 aa14.04□□□□□ -0.16
GABRB3-206ENST00000554556 GTSF1Q8WW33 167 aa14.04□□□□□ -0.16
GABRB3-206ENST00000554556 RPP21Q9H633 154 aaKnown RBP14.04□□□□□ -0.16
GABRB3-206ENST00000554556 UBR4Q5T4S7 5183 aa14.04□□□□□ -0.16
GABRB3-206ENST00000554556 TAGLN2P37802 199 aaKnown RBP14.03□□□□□ -0.16
GABRB3-206ENST00000554556 TEX261Q6UWH6 196 aa14.03□□□□□ -0.16
GABRB3-206ENST00000554556 PRSS3P2Q8NHM4 247 aa14.03□□□□□ -0.16
GABRB3-206ENST00000554556 TRAV26-2A0A0B4J265 109 aa14.02□□□□□ -0.17
GABRB3-206ENST00000554556 IGKV2-24A0A0C4DH68 120 aa14.02□□□□□ -0.17
GABRB3-206ENST00000554556 APCSP02743 223 aa14.02□□□□□ -0.17
GABRB3-206ENST00000554556 Q6ZNX1 250 aa14.02□□□□□ -0.17
GABRB3-206ENST00000554556 GVQW2A0A096LPI5 108 aaPredicted RBP14.01□□□□□ -0.17
GABRB3-206ENST00000554556 STPG4Q8N801 248 aa14.01□□□□□ -0.17
GABRB3-206ENST00000554556 PKIGQ9Y2B9 76 aa14.01□□□□□ -0.17
GABRB3-206ENST00000554556 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14□□□□□ -0.17
GABRB3-206ENST00000554556 IGKV2-29A2NJV5 120 aaPredicted RBP14□□□□□ -0.17
GABRB3-206ENST00000554556 FGF6P10767 208 aa14□□□□□ -0.17
GABRB3-206ENST00000554556 RPL39LQ96EH5 51 aaKnown RBP14□□□□□ -0.17
GABRB3-206ENST00000554556 RNASE7Q9H1E1 156 aaKnown RBP14□□□□□ -0.17
GABRB3-206ENST00000554556 ZNF25P17030 456 aaPredicted RBP13.99□□□□□ -0.17
GABRB3-206ENST00000554556 OR5A1Q8NGJ0 315 aa13.99□□□□□ -0.17
GABRB3-206ENST00000554556 BTF3L4Q96K17 158 aa13.99□□□□□ -0.17
GABRB3-206ENST00000554556 LINC00474Q9P2X8 69 aa13.99□□□□□ -0.17
GABRB3-206ENST00000554556 SDHAF1A6NFY7 115 aa13.98□□□□□ -0.17
GABRB3-206ENST00000554556 PMCHP20382 165 aa13.98□□□□□ -0.17
GABRB3-206ENST00000554556 OCC1Q8TAD7 63 aa13.98□□□□□ -0.17
GABRB3-206ENST00000554556 TMEM101Q96IK0 257 aa13.98□□□□□ -0.17
GABRB3-206ENST00000554556 LINC01600Q96MT4 127 aa13.98□□□□□ -0.17
GABRB3-206ENST00000554556 PRR3P79522 188 aaKnown RBP13.97□□□□□ -0.17
GABRB3-206ENST00000554556 FOXI1Q12951 378 aa13.97□□□□□ -0.17
GABRB3-206ENST00000554556 LYPD6BQ8NI32 183 aa13.97□□□□□ -0.17
GABRB3-206ENST00000554556 I3L3M4 83 aa13.96□□□□□ -0.17
GABRB3-206ENST00000554556 K7EN84 100 aa13.96□□□□□ -0.17
GABRB3-206ENST00000554556 A0A096LNI7 61 aa13.95□□□□□ -0.18
GABRB3-206ENST00000554556 FAM210AQ96ND0 272 aa13.95□□□□□ -0.18
GABRB3-206ENST00000554556 IGHV1-58A0A0C4DH39 117 aa13.94□□□□□ -0.18
GABRB3-206ENST00000554556 GATCO43716 136 aaKnown RBP13.94□□□□□ -0.18
GABRB3-206ENST00000554556 XCL1P47992 114 aa13.94□□□□□ -0.18
GABRB3-206ENST00000554556 FOXA3P55318 350 aaPredicted RBP13.94□□□□□ -0.18
GABRB3-206ENST00000554556 SLC51BQ86UW2 128 aa13.94□□□□□ -0.18
GABRB3-206ENST00000554556 LINC00959A0A1B0GUT2 108 aa13.93□□□□□ -0.18
GABRB3-206ENST00000554556 A8MWL6 223 aa13.93□□□□□ -0.18
GABRB3-206ENST00000554556 TRBV6-5A0A0K0K1A5 114 aa13.92□□□□□ -0.18
GABRB3-206ENST00000554556 CCL25O15444 150 aa13.92□□□□□ -0.18
GABRB3-206ENST00000554556 SS18Q15532 418 aa13.92□□□□□ -0.18
GABRB3-206ENST00000554556 SPINK6Q6UWN8 80 aa13.92□□□□□ -0.18
GABRB3-206ENST00000554556 FAM231BA6NCW3 169 aa13.91□□□□□ -0.18
GABRB3-206ENST00000554556 REG3GQ6UW15 175 aa13.91□□□□□ -0.18
GABRB3-206ENST00000554556 BORCS7Q96B45 105 aa13.91□□□□□ -0.18
GABRB3-206ENST00000554556 CARD19Q96LW7 228 aa13.91□□□□□ -0.18
GABRB3-206ENST00000554556 ESDP10768 282 aa13.9□□□□□ -0.18
GABRB3-206ENST00000554556 MRAP2Q96G30 205 aa13.9□□□□□ -0.18
GABRB3-206ENST00000554556 ST20Q9HBF5 79 aa13.9□□□□□ -0.18
GABRB3-206ENST00000554556 A0A0J9YXV3 536 aa13.89□□□□□ -0.19
GABRB3-206ENST00000554556 ZNF561-AS1K7EIQ3 104 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms