RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 ENHOQ6UWT2 76 aa6.85□□□□□ -1.31
PTCD2P1-201ENST00000554393 C15orf54Q8N8G6 183 aa6.85□□□□□ -1.31
PTCD2P1-201ENST00000554393 BAALCQ8WXS3 180 aa6.85□□□□□ -1.31
PTCD2P1-201ENST00000554393 PGLYRP4Q96LB8 373 aa6.85□□□□□ -1.31
PTCD2P1-201ENST00000554393 NIT2Q9NQR4 276 aa6.85□□□□□ -1.31
PTCD2P1-201ENST00000554393 PRR34Q9NV39 138 aa6.85□□□□□ -1.31
PTCD2P1-201ENST00000554393 MYCBP2O75592 4640 aa6.84□□□□□ -1.31
PTCD2P1-201ENST00000554393 A8MWL6 223 aa6.84□□□□□ -1.31
PTCD2P1-201ENST00000554393 RBX1P62877 108 aa6.84□□□□□ -1.31
PTCD2P1-201ENST00000554393 TWIST1Q15672 202 aa6.84□□□□□ -1.31
PTCD2P1-201ENST00000554393 C14orf177Q52M58 125 aa6.84□□□□□ -1.31
PTCD2P1-201ENST00000554393 Q6ZSA8 131 aa6.84□□□□□ -1.31
PTCD2P1-201ENST00000554393 GTSF1Q8WW33 167 aa6.84□□□□□ -1.31
PTCD2P1-201ENST00000554393 FAM210AQ96ND0 272 aa6.84□□□□□ -1.31
PTCD2P1-201ENST00000554393 GATCO43716 136 aaKnown RBP6.83□□□□□ -1.32
PTCD2P1-201ENST00000554393 NKX2-5P52952 324 aaPredicted RBP6.83□□□□□ -1.32
PTCD2P1-201ENST00000554393 FOXA3P55318 350 aaPredicted RBP6.83□□□□□ -1.32
PTCD2P1-201ENST00000554393 SMIM15Q7Z3B0 74 aa6.83□□□□□ -1.32
PTCD2P1-201ENST00000554393 SMIM7Q9BQ49 75 aa6.83□□□□□ -1.32
PTCD2P1-201ENST00000554393 EIF5A2Q9GZV4 153 aaKnown RBP6.83□□□□□ -1.32
PTCD2P1-201ENST00000554393 CDIP1Q9H305 208 aa6.83□□□□□ -1.32
PTCD2P1-201ENST00000554393 DNAH8Q96JB1 4490 aa6.83□□□□□ -1.32
PTCD2P1-201ENST00000554393 FAT1Q14517 4588 aa6.83□□□□□ -1.32
PTCD2P1-201ENST00000554393 SRRM2Q9UQ35 2752 aaKnown RBP6.83□□□□□ -1.32
PTCD2P1-201ENST00000554393 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.82□□□□□ -1.32
PTCD2P1-201ENST00000554393 A0A1B0GUV1 79 aa6.82□□□□□ -1.32
PTCD2P1-201ENST00000554393 A0A1B0GVG6 124 aa6.82□□□□□ -1.32
PTCD2P1-201ENST00000554393 GAGE6Q13070 117 aa6.82□□□□□ -1.32
PTCD2P1-201ENST00000554393 Q5VSD8 79 aa6.82□□□□□ -1.32
PTCD2P1-201ENST00000554393 TEX261Q6UWH6 196 aa6.82□□□□□ -1.32
PTCD2P1-201ENST00000554393 TMEM243Q9BU79 118 aa6.82□□□□□ -1.32
PTCD2P1-201ENST00000554393 FAM231BA6NCW3 169 aa6.81□□□□□ -1.32
PTCD2P1-201ENST00000554393 CEBPGP53567 150 aa6.81□□□□□ -1.32
PTCD2P1-201ENST00000554393 COTL1Q14019 142 aa6.81□□□□□ -1.32
PTCD2P1-201ENST00000554393 LINC01551Q86U37 167 aa6.81□□□□□ -1.32
PTCD2P1-201ENST00000554393 LINC00269Q8N2A0 174 aa6.81□□□□□ -1.32
PTCD2P1-201ENST00000554393 GATD1Q8NB37 220 aa6.81□□□□□ -1.32
PTCD2P1-201ENST00000554393 GFRA4Q9GZZ7 299 aa6.81□□□□□ -1.32
PTCD2P1-201ENST00000554393 FAM30AQ9NZY2 134 aa6.81□□□□□ -1.32
PTCD2P1-201ENST00000554393 ZNF727A8MUV8 499 aa6.8□□□□□ -1.32
PTCD2P1-201ENST00000554393 NCR2O95944 276 aa6.8□□□□□ -1.32
PTCD2P1-201ENST00000554393 SRP19P09132 144 aaKnown RBP6.8□□□□□ -1.32
PTCD2P1-201ENST00000554393 AMTP48728 403 aa6.8□□□□□ -1.32
PTCD2P1-201ENST00000554393 REG3AQ06141 175 aa6.8□□□□□ -1.32
PTCD2P1-201ENST00000554393 KRTAP26-1Q6PEX3 210 aa6.8□□□□□ -1.32
PTCD2P1-201ENST00000554393 TSKUQ8WUA8 353 aa6.8□□□□□ -1.32
PTCD2P1-201ENST00000554393 BORCS7Q96B45 105 aa6.8□□□□□ -1.32
PTCD2P1-201ENST00000554393 OSTCQ9NRP0 149 aa6.8□□□□□ -1.32
PTCD2P1-201ENST00000554393 VPS13BQ7Z7G8 4022 aa6.79□□□□□ -1.32
PTCD2P1-201ENST00000554393 TRAV8-4A0A0B4J246 113 aa6.79□□□□□ -1.32
PTCD2P1-201ENST00000554393 TRAV26-2A0A0B4J265 109 aa6.79□□□□□ -1.32
PTCD2P1-201ENST00000554393 USP17L23D6RBM5 183 aa6.79□□□□□ -1.32
PTCD2P1-201ENST00000554393 UBE2L6O14933 153 aa6.79□□□□□ -1.32
PTCD2P1-201ENST00000554393 HLA-DQA1P01909 254 aa6.79□□□□□ -1.32
PTCD2P1-201ENST00000554393 SMR3BP02814 79 aaPredicted RBP6.79□□□□□ -1.32
PTCD2P1-201ENST00000554393 INAFM2P0DMQ5 153 aa6.79□□□□□ -1.32
PTCD2P1-201ENST00000554393 HAMPP81172 84 aa6.79□□□□□ -1.32
PTCD2P1-201ENST00000554393 FAM74A3Q4VXF1 159 aa6.79□□□□□ -1.32
PTCD2P1-201ENST00000554393 C20orf203Q8NBC4 194 aa6.79□□□□□ -1.32
PTCD2P1-201ENST00000554393 TRBV6-5A0A0K0K1A5 114 aa6.78□□□□□ -1.32
PTCD2P1-201ENST00000554393 A0A1B0GUT8 65 aa6.78□□□□□ -1.32
PTCD2P1-201ENST00000554393 HIGD1CA8MV81 97 aa6.78□□□□□ -1.32
PTCD2P1-201ENST00000554393 H7C423 109 aa6.78□□□□□ -1.32
PTCD2P1-201ENST00000554393 DGAT2L7PQ6IED9 249 aa6.78□□□□□ -1.32
PTCD2P1-201ENST00000554393 CLPSL2Q6UWE3 100 aa6.78□□□□□ -1.32
PTCD2P1-201ENST00000554393 SMDT1Q9H4I9 107 aa6.78□□□□□ -1.32
PTCD2P1-201ENST00000554393 IGLV4-60A0A075B6I1 120 aa6.77□□□□□ -1.33
PTCD2P1-201ENST00000554393 SDHAF1A6NFY7 115 aa6.77□□□□□ -1.33
PTCD2P1-201ENST00000554393 CLRN3Q8NCR9 226 aa6.77□□□□□ -1.33
PTCD2P1-201ENST00000554393 RPL39LQ96EH5 51 aaKnown RBP6.77□□□□□ -1.33
PTCD2P1-201ENST00000554393 TMEM191AQ9H0A3 160 aa6.77□□□□□ -1.33
PTCD2P1-201ENST00000554393 PLA2G2DQ9UNK4 145 aa6.77□□□□□ -1.33
PTCD2P1-201ENST00000554393 RNF213Q63HN8 5207 aa6.77□□□□□ -1.33
PTCD2P1-201ENST00000554393 FLG2Q5D862 2391 aaPredicted RBP6.76□□□□□ -1.33
PTCD2P1-201ENST00000554393 APCSP02743 223 aa6.76□□□□□ -1.33
PTCD2P1-201ENST00000554393 LINC00310P59036 64 aa6.76□□□□□ -1.33
PTCD2P1-201ENST00000554393 TMEM241Q24JQ0 296 aa6.76□□□□□ -1.33
PTCD2P1-201ENST00000554393 LINC01620Q4KN68 170 aa6.76□□□□□ -1.33
PTCD2P1-201ENST00000554393 SCXQ7RTU7 201 aa6.76□□□□□ -1.33
PTCD2P1-201ENST00000554393 ISOC2Q96AB3 205 aa6.76□□□□□ -1.33
PTCD2P1-201ENST00000554393 CHAC1Q9BUX1 264 aa6.76□□□□□ -1.33
PTCD2P1-201ENST00000554393 V9GYV3 84 aa6.76□□□□□ -1.33
PTCD2P1-201ENST00000554393 IGLV10-54A0A075B6I4 117 aa6.75□□□□□ -1.33
PTCD2P1-201ENST00000554393 I3L3M4 83 aa6.75□□□□□ -1.33
PTCD2P1-201ENST00000554393 PLA2G1BP04054 148 aaKnown RBP6.75□□□□□ -1.33
PTCD2P1-201ENST00000554393 PRSS1P07477 247 aa6.75□□□□□ -1.33
PTCD2P1-201ENST00000554393 RPL23P62829 140 aaKnown RBP6.75□□□□□ -1.33
PTCD2P1-201ENST00000554393 PEA15Q15121 130 aa6.75□□□□□ -1.33
PTCD2P1-201ENST00000554393 MRAP2Q96G30 205 aa6.75□□□□□ -1.33
PTCD2P1-201ENST00000554393 NAT8Q9UHE5 227 aa6.75□□□□□ -1.33
PTCD2P1-201ENST00000554393 ZNF25P17030 456 aaPredicted RBP6.74□□□□□ -1.33
PTCD2P1-201ENST00000554393 CNBPP62633 177 aaKnown RBP6.74□□□□□ -1.33
PTCD2P1-201ENST00000554393 RIGQ13278 110 aa6.74□□□□□ -1.33
PTCD2P1-201ENST00000554393 AMMECR1LQ6DCA0 310 aa6.74□□□□□ -1.33
PTCD2P1-201ENST00000554393 C9orf163Q8N9P6 203 aa6.74□□□□□ -1.33
PTCD2P1-201ENST00000554393 DEFB104AQ8WTQ1 72 aa6.74□□□□□ -1.33
PTCD2P1-201ENST00000554393 RNF185Q96GF1 192 aa6.74□□□□□ -1.33
PTCD2P1-201ENST00000554393 ST20Q9HBF5 79 aa6.74□□□□□ -1.33
PTCD2P1-201ENST00000554393 NAT8BQ9UHF3 227 aa6.74□□□□□ -1.33
PTCD2P1-201ENST00000554393 TRBV27A0A0K0K1C4 114 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms