RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 WNK2Q9Y3S1 2297 aa4.41□□□□□ -1.7
VPS33B-203ENST00000554264 IGHV3OR16-10A0A075B7F0 116 aa4.4□□□□□ -1.71
VPS33B-203ENST00000554264 A0A0A0MQY5 61 aa4.4□□□□□ -1.71
VPS33B-203ENST00000554264 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.4□□□□□ -1.71
VPS33B-203ENST00000554264 TRAV8-2A0A0B4J237 113 aa4.4□□□□□ -1.71
VPS33B-203ENST00000554264 A0A0J9YX75 114 aa4.4□□□□□ -1.71
VPS33B-203ENST00000554264 TRBV6-5A0A0K0K1A5 114 aa4.4□□□□□ -1.71
VPS33B-203ENST00000554264 ZNF815PA8K554 130 aa4.4□□□□□ -1.71
VPS33B-203ENST00000554264 K7ERJ3 54 aa4.4□□□□□ -1.71
VPS33B-203ENST00000554264 LGALS1P09382 135 aaKnown RBP4.4□□□□□ -1.71
VPS33B-203ENST00000554264 HLA-DMBP28068 263 aa4.4□□□□□ -1.71
VPS33B-203ENST00000554264 PMVKQ15126 192 aa4.4□□□□□ -1.71
VPS33B-203ENST00000554264 DEFB112Q30KQ8 113 aa4.4□□□□□ -1.71
VPS33B-203ENST00000554264 ETDBQ3ZM63 59 aa4.4□□□□□ -1.71
VPS33B-203ENST00000554264 KPRPQ5T749 579 aaPredicted RBP4.4□□□□□ -1.71
VPS33B-203ENST00000554264 TEN1Q86WV5 123 aa4.4□□□□□ -1.71
VPS33B-203ENST00000554264 SBSPONQ8IVN8 264 aa4.4□□□□□ -1.71
VPS33B-203ENST00000554264 LINC01006Q8NI28 216 aa4.4□□□□□ -1.71
VPS33B-203ENST00000554264 BAALCQ8WXS3 180 aa4.4□□□□□ -1.71
VPS33B-203ENST00000554264 FAM19A4Q96LR4 140 aa4.4□□□□□ -1.71
VPS33B-203ENST00000554264 PRADC1Q9BSG0 188 aa4.4□□□□□ -1.71
VPS33B-203ENST00000554264 MOB4Q9Y3A3 225 aa4.4□□□□□ -1.71
VPS33B-203ENST00000554264 A0A0B4J2C4 111 aa4.39□□□□□ -1.71
VPS33B-203ENST00000554264 A8MWV9 139 aa4.39□□□□□ -1.71
VPS33B-203ENST00000554264 PRAC2D3DTV9 90 aa4.39□□□□□ -1.71
VPS33B-203ENST00000554264 H3BVH4 76 aa4.39□□□□□ -1.71
VPS33B-203ENST00000554264 ATP6V0E1O15342 81 aa4.39□□□□□ -1.71
VPS33B-203ENST00000554264 TRGV3P03979 118 aa4.39□□□□□ -1.71
VPS33B-203ENST00000554264 ID1P41134 155 aa4.39□□□□□ -1.71
VPS33B-203ENST00000554264 FXYD7P58549 80 aa4.39□□□□□ -1.71
VPS33B-203ENST00000554264 KRTAP10-3P60369 221 aa4.39□□□□□ -1.71
VPS33B-203ENST00000554264 WFDC2Q14508 124 aa4.39□□□□□ -1.71
VPS33B-203ENST00000554264 ECSCRQ19T08 205 aa4.39□□□□□ -1.71
VPS33B-203ENST00000554264 MORN3Q6PF18 240 aaPredicted RBP4.39□□□□□ -1.71
VPS33B-203ENST00000554264 BRD3OSQ6XYD6 125 aa4.39□□□□□ -1.71
VPS33B-203ENST00000554264 C10orf126Q8N4M7 172 aa4.39□□□□□ -1.71
VPS33B-203ENST00000554264 MAPKAPK5-AS1Q8N8E1 139 aa4.39□□□□□ -1.71
VPS33B-203ENST00000554264 SLC25A29Q8N8R3 303 aa4.39□□□□□ -1.71
VPS33B-203ENST00000554264 MRAPQ8TCY5 172 aa4.39□□□□□ -1.71
VPS33B-203ENST00000554264 PLEKHB2Q96CS7 222 aa4.39□□□□□ -1.71
VPS33B-203ENST00000554264 SPAG8Q99932 426 aaPredicted RBP4.39□□□□□ -1.71
VPS33B-203ENST00000554264 NAA38Q9BRA0 125 aaKnown RBP4.39□□□□□ -1.71
VPS33B-203ENST00000554264 GTSF1LQ9H1H1 148 aa4.39□□□□□ -1.71
VPS33B-203ENST00000554264 WNK1Q9H4A3 2382 aa4.39□□□□□ -1.71
VPS33B-203ENST00000554264 TRAV41A0A0B4J266 112 aa4.38□□□□□ -1.71
VPS33B-203ENST00000554264 TRBV27A0A0K0K1C4 114 aa4.38□□□□□ -1.71
VPS33B-203ENST00000554264 SDHAF1A6NFY7 115 aa4.38□□□□□ -1.71
VPS33B-203ENST00000554264 K7EMT4 169 aa4.38□□□□□ -1.71
VPS33B-203ENST00000554264 IGF1P05019 195 aa4.38□□□□□ -1.71
VPS33B-203ENST00000554264 CD7P09564 240 aa4.38□□□□□ -1.71
VPS33B-203ENST00000554264 P0DMU3 169 aa4.38□□□□□ -1.71
VPS33B-203ENST00000554264 FAM231AP0DMU4 169 aa4.38□□□□□ -1.71
VPS33B-203ENST00000554264 FAM231CP0DMU5 169 aa4.38□□□□□ -1.71
VPS33B-203ENST00000554264 LGALS3P17931 250 aaKnown RBP4.38□□□□□ -1.71
VPS33B-203ENST00000554264 ARL3P36405 182 aa4.38□□□□□ -1.71
VPS33B-203ENST00000554264 CKS1BP61024 79 aa4.38□□□□□ -1.71
VPS33B-203ENST00000554264 MRPL23Q16540 153 aaKnown RBP4.38□□□□□ -1.71
VPS33B-203ENST00000554264 NSUN5P1Q3KNT7 163 aa4.38□□□□□ -1.71
VPS33B-203ENST00000554264 CLEC19AQ6UXS0 136 aa4.38□□□□□ -1.71
VPS33B-203ENST00000554264 NFE4Q86UQ8 179 aa4.38□□□□□ -1.71
VPS33B-203ENST00000554264 NDUFA11Q86Y39 141 aa4.38□□□□□ -1.71
VPS33B-203ENST00000554264 RNF182Q8N6D2 247 aa4.38□□□□□ -1.71
VPS33B-203ENST00000554264 ZFAND2AQ8N6M9 145 aa4.38□□□□□ -1.71
VPS33B-203ENST00000554264 C5orf56Q8N8D9 126 aa4.38□□□□□ -1.71
VPS33B-203ENST00000554264 COPS9Q8WXC6 57 aa4.38□□□□□ -1.71
VPS33B-203ENST00000554264 RASL10AQ92737 203 aa4.38□□□□□ -1.71
VPS33B-203ENST00000554264 RNF183Q96D59 192 aa4.38□□□□□ -1.71
VPS33B-203ENST00000554264 EDA2RQ9HAV5 297 aa4.38□□□□□ -1.71
VPS33B-203ENST00000554264 PRO1854Q9UHT4 67 aa4.38□□□□□ -1.71
VPS33B-203ENST00000554264 S4R3C0 116 aa4.38□□□□□ -1.71
VPS33B-203ENST00000554264 A0A0J9YY99 117 aa4.37□□□□□ -1.71
VPS33B-203ENST00000554264 IGIPA6NJ69 53 aa4.37□□□□□ -1.71
VPS33B-203ENST00000554264 KLLNB2CW77 178 aa4.37□□□□□ -1.71
VPS33B-203ENST00000554264 LGALS9O00182 355 aa4.37□□□□□ -1.71
VPS33B-203ENST00000554264 SOCS3O14543 225 aa4.37□□□□□ -1.71
VPS33B-203ENST00000554264 NPFFO15130 113 aa4.37□□□□□ -1.71
VPS33B-203ENST00000554264 LEPROTO15243 131 aa4.37□□□□□ -1.71
VPS33B-203ENST00000554264 IGHV3-23P01764 117 aa4.37□□□□□ -1.71
VPS33B-203ENST00000554264 PRB2P02812 416 aaPredicted RBP4.37□□□□□ -1.71
VPS33B-203ENST00000554264 ZNF688P0C7X2 276 aa4.37□□□□□ -1.71
VPS33B-203ENST00000554264 SCGB1C2P0DMR2 95 aa4.37□□□□□ -1.71
VPS33B-203ENST00000554264 GATA1P15976 413 aaPredicted RBP4.37□□□□□ -1.71
VPS33B-203ENST00000554264 ZNF876PQ49A33 203 aa4.37□□□□□ -1.71
VPS33B-203ENST00000554264 Q6Q795 121 aa4.37□□□□□ -1.71
VPS33B-203ENST00000554264 FAM159AQ6UWV7 190 aa4.37□□□□□ -1.71
VPS33B-203ENST00000554264 ZFP2Q6ZN57 461 aa4.37□□□□□ -1.71
VPS33B-203ENST00000554264 C16orf95Q9H693 158 aa4.37□□□□□ -1.71
VPS33B-203ENST00000554264 MDFICQ9P1T7 246 aa4.37□□□□□ -1.71
VPS33B-203ENST00000554264 ARHGAP32A7KAX9 2087 aa4.37□□□□□ -1.71
VPS33B-203ENST00000554264 NBEAL2Q6ZNJ1 2754 aa4.36□□□□□ -1.71
VPS33B-203ENST00000554264 TRAV26-2A0A0B4J265 109 aa4.36□□□□□ -1.71
VPS33B-203ENST00000554264 LOC107984156A0A0G2JMH3 177 aa4.36□□□□□ -1.71
VPS33B-203ENST00000554264 GAS8-AS1O95177 125 aa4.36□□□□□ -1.71
VPS33B-203ENST00000554264 TSPAN13O95857 204 aa4.36□□□□□ -1.71
VPS33B-203ENST00000554264 MGPP08493 103 aa4.36□□□□□ -1.71
VPS33B-203ENST00000554264 SPINK8P0C7L1 97 aa4.36□□□□□ -1.71
VPS33B-203ENST00000554264 SAA4P35542 130 aa4.36□□□□□ -1.71
VPS33B-203ENST00000554264 POLR2KP53803 58 aaKnown RBP4.36□□□□□ -1.71
VPS33B-203ENST00000554264 ATXN8Q156A1 80 aa4.36□□□□□ -1.71
VPS33B-203ENST00000554264 Q6ZSV7 163 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms