RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 NTF3P20783 257 aa4.36□□□□□ -1.71
SLIRP-203ENST00000554074 UBE2D3P61077 147 aa4.36□□□□□ -1.71
SLIRP-203ENST00000554074 UBE2D2P62837 147 aa4.36□□□□□ -1.71
SLIRP-203ENST00000554074 WFDC2Q14508 124 aa4.36□□□□□ -1.71
SLIRP-203ENST00000554074 RHEBQ15382 184 aa4.36□□□□□ -1.71
SLIRP-203ENST00000554074 ATP5L2Q7Z4Y8 100 aa4.36□□□□□ -1.71
SLIRP-203ENST00000554074 SVBPQ8N300 66 aa4.36□□□□□ -1.71
SLIRP-203ENST00000554074 Q8N976 141 aa4.36□□□□□ -1.71
SLIRP-203ENST00000554074 GTSF1Q8WW33 167 aa4.36□□□□□ -1.71
SLIRP-203ENST00000554074 BTF3L4Q96K17 158 aa4.36□□□□□ -1.71
SLIRP-203ENST00000554074 TPPP3Q9BW30 176 aa4.36□□□□□ -1.71
SLIRP-203ENST00000554074 DPH3P1Q9H4G8 78 aa4.36□□□□□ -1.71
SLIRP-203ENST00000554074 FAM30AQ9NZY2 134 aa4.36□□□□□ -1.71
SLIRP-203ENST00000554074 A0A087WX48 190 aa4.35□□□□□ -1.71
SLIRP-203ENST00000554074 SNAPINO95295 136 aa4.35□□□□□ -1.71
SLIRP-203ENST00000554074 PPP1R17O96001 155 aa4.35□□□□□ -1.71
SLIRP-203ENST00000554074 ADCYAP1P18509 176 aa4.35□□□□□ -1.71
SLIRP-203ENST00000554074 PKIAP61925 76 aa4.35□□□□□ -1.71
SLIRP-203ENST00000554074 Q0VG73 95 aa4.35□□□□□ -1.71
SLIRP-203ENST00000554074 TWIST1Q15672 202 aa4.35□□□□□ -1.71
SLIRP-203ENST00000554074 KCNIP4Q6PIL6 250 aa4.35□□□□□ -1.71
SLIRP-203ENST00000554074 RASL11AQ6T310 242 aa4.35□□□□□ -1.71
SLIRP-203ENST00000554074 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.35□□□□□ -1.71
SLIRP-203ENST00000554074 NUP35Q8NFH5 326 aa4.35□□□□□ -1.71
SLIRP-203ENST00000554074 PGLYRP4Q96LB8 373 aa4.35□□□□□ -1.71
SLIRP-203ENST00000554074 DNAJC30Q96LL9 226 aa4.35□□□□□ -1.71
SLIRP-203ENST00000554074 TMEM191AQ9H0A3 160 aa4.35□□□□□ -1.71
SLIRP-203ENST00000554074 KIF25-AS1Q9Y6Z4 181 aa4.35□□□□□ -1.71
SLIRP-203ENST00000554074 FAT1Q14517 4588 aa4.34□□□□□ -1.71
SLIRP-203ENST00000554074 TRBV6-8A0A0A6YYG3 113 aa4.34□□□□□ -1.71
SLIRP-203ENST00000554074 PLA2G1BP04054 148 aaKnown RBP4.34□□□□□ -1.71
SLIRP-203ENST00000554074 S100PP25815 95 aa4.34□□□□□ -1.71
SLIRP-203ENST00000554074 COX19Q49B96 90 aa4.34□□□□□ -1.71
SLIRP-203ENST00000554074 C14orf177Q52M58 125 aa4.34□□□□□ -1.71
SLIRP-203ENST00000554074 TMEM97Q5BJF2 176 aa4.34□□□□□ -1.71
SLIRP-203ENST00000554074 BAALCQ8WXS3 180 aa4.34□□□□□ -1.71
SLIRP-203ENST00000554074 KLK12Q9UKR0 248 aa4.34□□□□□ -1.71
SLIRP-203ENST00000554074 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.33□□□□□ -1.72
SLIRP-203ENST00000554074 IGKV2D-24A0A075B6R9 120 aa4.33□□□□□ -1.72
SLIRP-203ENST00000554074 F5H697 171 aa4.33□□□□□ -1.72
SLIRP-203ENST00000554074 HBBP68871 147 aa4.33□□□□□ -1.72
SLIRP-203ENST00000554074 HAMPP81172 84 aa4.33□□□□□ -1.72
SLIRP-203ENST00000554074 ZNF56Q15929 161 aa4.33□□□□□ -1.72
SLIRP-203ENST00000554074 GATD1Q8NB37 220 aa4.33□□□□□ -1.72
SLIRP-203ENST00000554074 NEXN-AS1Q8NBZ9 246 aa4.33□□□□□ -1.72
SLIRP-203ENST00000554074 CLRN3Q8NCR9 226 aa4.33□□□□□ -1.72
SLIRP-203ENST00000554074 UBE2WQ96B02 151 aa4.33□□□□□ -1.72
SLIRP-203ENST00000554074 MRAP2Q96G30 205 aa4.33□□□□□ -1.72
SLIRP-203ENST00000554074 A0A1B0GXF2 115 aa4.32□□□□□ -1.72
SLIRP-203ENST00000554074 C7orf77A4D0Y5 90 aa4.32□□□□□ -1.72
SLIRP-203ENST00000554074 M0QY20 66 aa4.32□□□□□ -1.72
SLIRP-203ENST00000554074 LECT2O14960 151 aa4.32□□□□□ -1.72
SLIRP-203ENST00000554074 APOC3P02656 99 aa4.32□□□□□ -1.72
SLIRP-203ENST00000554074 CRPP02741 224 aa4.32□□□□□ -1.72
SLIRP-203ENST00000554074 PPBPP02775 128 aa4.32□□□□□ -1.72
SLIRP-203ENST00000554074 MIAQ16674 131 aa4.32□□□□□ -1.72
SLIRP-203ENST00000554074 ENHOQ6UWT2 76 aa4.32□□□□□ -1.72
SLIRP-203ENST00000554074 SCXQ7RTU7 201 aa4.32□□□□□ -1.72
SLIRP-203ENST00000554074 CHAC1Q9BUX1 264 aa4.32□□□□□ -1.72
SLIRP-203ENST00000554074 C1orf43Q9BWL3 253 aa4.32□□□□□ -1.72
SLIRP-203ENST00000554074 NIT2Q9NQR4 276 aa4.32□□□□□ -1.72
SLIRP-203ENST00000554074 MYCBP2O75592 4640 aa4.31□□□□□ -1.72
SLIRP-203ENST00000554074 DNAH8Q96JB1 4490 aa4.31□□□□□ -1.72
SLIRP-203ENST00000554074 MUC21A0A0G2JKD1 596 aa4.31□□□□□ -1.72
SLIRP-203ENST00000554074 MUC21A0A140T8X8 626 aa4.31□□□□□ -1.72
SLIRP-203ENST00000554074 KRTAP29-1A8MX34 341 aaPredicted RBP4.31□□□□□ -1.72
SLIRP-203ENST00000554074 TMEM262E9PQX1 116 aa4.31□□□□□ -1.72
SLIRP-203ENST00000554074 PHOX2AO14813 284 aa4.31□□□□□ -1.72
SLIRP-203ENST00000554074 TCAPO15273 167 aa4.31□□□□□ -1.72
SLIRP-203ENST00000554074 ANGP03950 147 aaKnown RBP4.31□□□□□ -1.72
SLIRP-203ENST00000554074 MGPP08493 103 aa4.31□□□□□ -1.72
SLIRP-203ENST00000554074 IQCJQ1A5X6 159 aa4.31□□□□□ -1.72
SLIRP-203ENST00000554074 MPV17L2Q567V2 206 aa4.31□□□□□ -1.72
SLIRP-203ENST00000554074 FAM104BQ5XKR9 115 aa4.31□□□□□ -1.72
SLIRP-203ENST00000554074 DEFB104AQ8WTQ1 72 aa4.31□□□□□ -1.72
SLIRP-203ENST00000554074 RPS10P5Q9NQ39 176 aa4.31□□□□□ -1.72
SLIRP-203ENST00000554074 PRR34Q9NV39 138 aa4.31□□□□□ -1.72
SLIRP-203ENST00000554074 LAMTOR2Q9Y2Q5 125 aa4.31□□□□□ -1.72
SLIRP-203ENST00000554074 TRBV25-1A0A075B6N4 114 aa4.3□□□□□ -1.72
SLIRP-203ENST00000554074 TRBV6-5A0A0K0K1A5 114 aa4.3□□□□□ -1.72
SLIRP-203ENST00000554074 NCR2O95944 276 aa4.3□□□□□ -1.72
SLIRP-203ENST00000554074 MT-ND6P03923 174 aa4.3□□□□□ -1.72
SLIRP-203ENST00000554074 RAB4AP20338 218 aa4.3□□□□□ -1.72
SLIRP-203ENST00000554074 SSTP61278 116 aa4.3□□□□□ -1.72
SLIRP-203ENST00000554074 RPL32P62910 135 aaKnown RBP4.3□□□□□ -1.72
SLIRP-203ENST00000554074 SUMO4Q6EEV6 95 aa4.3□□□□□ -1.72
SLIRP-203ENST00000554074 DGAT2L7PQ6IED9 249 aa4.3□□□□□ -1.72
SLIRP-203ENST00000554074 NTM-AS1Q6ZSK4 140 aa4.3□□□□□ -1.72
SLIRP-203ENST00000554074 CHCHD5Q9BSY4 110 aa4.3□□□□□ -1.72
SLIRP-203ENST00000554074 TRBV24-1A0A075B6N3 115 aa4.29□□□□□ -1.72
SLIRP-203ENST00000554074 IGHV1-24A0A0C4DH33 117 aa4.29□□□□□ -1.72
SLIRP-203ENST00000554074 A0A1B0GUV1 79 aa4.29□□□□□ -1.72
SLIRP-203ENST00000554074 USP17L23D6RBM5 183 aa4.29□□□□□ -1.72
SLIRP-203ENST00000554074 HLA-DQA1P01909 254 aa4.29□□□□□ -1.72
SLIRP-203ENST00000554074 CAMPP49913 170 aa4.29□□□□□ -1.72
SLIRP-203ENST00000554074 KRTAP10-4P60372 401 aaPredicted RBP4.29□□□□□ -1.72
SLIRP-203ENST00000554074 RBX1P62877 108 aa4.29□□□□□ -1.72
SLIRP-203ENST00000554074 LINC01620Q4KN68 170 aa4.29□□□□□ -1.72
SLIRP-203ENST00000554074 MRPL54Q6P161 138 aaKnown RBP4.29□□□□□ -1.72
SLIRP-203ENST00000554074 KRTAP26-1Q6PEX3 210 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms