RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 CFC1BP0CG36 223 aa3.01□□□□□ -1.93
RDH11-204ENST00000553578 CFC1P0CG37 223 aa3.01□□□□□ -1.93
RDH11-204ENST00000553578 SRSF12Q8WXF0 261 aaKnown RBP3.01□□□□□ -1.93
RDH11-204ENST00000553578 IGKV1D-17A0A075B6S4 117 aa3.01□□□□□ -1.93
RDH11-204ENST00000553578 IGHV3-48P01763 117 aa3.01□□□□□ -1.93
RDH11-204ENST00000553578 UBE2D1P51668 147 aa3.01□□□□□ -1.93
RDH11-204ENST00000553578 C11orf71Q6IPW1 123 aa3.01□□□□□ -1.93
RDH11-204ENST00000553578 SLC25A29Q8N8R3 303 aa3.01□□□□□ -1.93
RDH11-204ENST00000553578 NACAE9PAV3 2078 aa3.01□□□□□ -1.93
RDH11-204ENST00000553578 LAMA5O15230 3695 aa3□□□□□ -1.93
RDH11-204ENST00000553578 ATMQ13315 3056 aa3□□□□□ -1.93
RDH11-204ENST00000553578 AKAP9Q99996 3911 aa3□□□□□ -1.93
RDH11-204ENST00000553578 PROP1O75360 226 aa3□□□□□ -1.93
RDH11-204ENST00000553578 ARMS2P0C7Q2 107 aa3□□□□□ -1.93
RDH11-204ENST00000553578 C17orf58Q2M2W7 97 aa3□□□□□ -1.93
RDH11-204ENST00000553578 ZNF833PQ6ZTB9 187 aa3□□□□□ -1.93
RDH11-204ENST00000553578 DAND5Q8N907 189 aa3□□□□□ -1.93
RDH11-204ENST00000553578 FAM218AQ96MZ4 157 aa3□□□□□ -1.93
RDH11-204ENST00000553578 LAMTOR3Q9UHA4 124 aa3□□□□□ -1.93
RDH11-204ENST00000553578 ZNF292O60281 2723 aa3□□□□□ -1.93
RDH11-204ENST00000553578 A0A096LNJ9 63 aa3□□□□□ -1.93
RDH11-204ENST00000553578 TMEM30CPA0ZSE6 113 aa3□□□□□ -1.93
RDH11-204ENST00000553578 WNT9BO14905 357 aa3□□□□□ -1.93
RDH11-204ENST00000553578 SH2D1AO60880 128 aa3□□□□□ -1.93
RDH11-204ENST00000553578 ZNF826PQ6ZT77 177 aa3□□□□□ -1.93
RDH11-204ENST00000553578 FP248Q71RG6 208 aaPredicted RBP3□□□□□ -1.93
RDH11-204ENST00000553578 A0A087WVE0 104 aa3□□□□□ -1.93
RDH11-204ENST00000553578 LEAP2Q969E1 77 aa3□□□□□ -1.93
RDH11-204ENST00000553578 BDP1A6H8Y1 2624 aa2.99□□□□□ -1.93
RDH11-204ENST00000553578 TRBV7-1A0A0A6YYK4 115 aa2.99□□□□□ -1.93
RDH11-204ENST00000553578 C17orf98A8MV24 154 aa2.99□□□□□ -1.93
RDH11-204ENST00000553578 PLNP26678 52 aa2.99□□□□□ -1.93
RDH11-204ENST00000553578 MRGPRG-AS1Q2M3A8 158 aa2.99□□□□□ -1.93
RDH11-204ENST00000553578 IGFL4Q6B9Z1 124 aa2.99□□□□□ -1.93
RDH11-204ENST00000553578 DCANP1Q8TF63 244 aa2.99□□□□□ -1.93
RDH11-204ENST00000553578 DEFB127Q9H1M4 99 aa2.99□□□□□ -1.93
RDH11-204ENST00000553578 CFAP47Q6ZTR5 3102 aa2.99□□□□□ -1.93
RDH11-204ENST00000553578 PCNX2A6NKB5 2137 aa2.99□□□□□ -1.93
RDH11-204ENST00000553578 TRBV7-6A0A0J9YX20 115 aa2.99□□□□□ -1.93
RDH11-204ENST00000553578 WI2-2373I1.2A0A1W2PRP0 233 aa2.99□□□□□ -1.93
RDH11-204ENST00000553578 GAFA1Q96PS6 74 aa2.99□□□□□ -1.93
RDH11-204ENST00000553578 RNF5Q99942 180 aa2.99□□□□□ -1.93
RDH11-204ENST00000553578 KRTAP4-9Q9BYQ8 210 aa2.99□□□□□ -1.93
RDH11-204ENST00000553578 ZNF580Q9UK33 172 aa2.99□□□□□ -1.93
RDH11-204ENST00000553578 MAP1AP78559 2803 aaPredicted RBP2.99□□□□□ -1.93
RDH11-204ENST00000553578 DNAL4O96015 105 aa2.99□□□□□ -1.93
RDH11-204ENST00000553578 APELAP0DMC3 54 aa2.99□□□□□ -1.93
RDH11-204ENST00000553578 DSCR9P59020 149 aa2.99□□□□□ -1.93
RDH11-204ENST00000553578 TMEM75Q8N9X5 138 aa2.99□□□□□ -1.93
RDH11-204ENST00000553578 C16orf95Q9H693 158 aa2.99□□□□□ -1.93
RDH11-204ENST00000553578 TMEM14BQ9NUH8 114 aa2.99□□□□□ -1.93
RDH11-204ENST00000553578 DMXL2Q8TDJ6 3036 aa2.99□□□□□ -1.93
RDH11-204ENST00000553578 TACC2O95359 2948 aa2.99□□□□□ -1.93
RDH11-204ENST00000553578 IGHV1-46P01743 117 aa2.98□□□□□ -1.93
RDH11-204ENST00000553578 Q6ZRU5 148 aa2.98□□□□□ -1.93
RDH11-204ENST00000553578 Q8N1X5 172 aa2.98□□□□□ -1.93
RDH11-204ENST00000553578 Q8N8P6 123 aa2.98□□□□□ -1.93
RDH11-204ENST00000553578 DEFB108BQ8NET1 73 aa2.98□□□□□ -1.93
RDH11-204ENST00000553578 ABCA4P78363 2273 aa2.98□□□□□ -1.93
RDH11-204ENST00000553578 OTOGLQ3ZCN5 2332 aa2.98□□□□□ -1.93
RDH11-204ENST00000553578 FAM223BA6NKX1 122 aa2.98□□□□□ -1.93
RDH11-204ENST00000553578 BSPH1Q075Z2 132 aa2.98□□□□□ -1.93
RDH11-204ENST00000553578 DEFB109BQ30KR1 87 aa2.98□□□□□ -1.93
RDH11-204ENST00000553578 KLHL30-AS1Q8NEE0 82 aa2.98□□□□□ -1.93
RDH11-204ENST00000553578 SMCR5Q8TEV8 140 aa2.98□□□□□ -1.93
RDH11-204ENST00000553578 KRTAP9-3Q9BYQ3 159 aa2.98□□□□□ -1.93
RDH11-204ENST00000553578 KALRNO60229 2985 aa2.98□□□□□ -1.93
RDH11-204ENST00000553578 TTC28Q96AY4 2481 aa2.98□□□□□ -1.93
RDH11-204ENST00000553578 LINC01619G3V211 115 aa2.98□□□□□ -1.93
RDH11-204ENST00000553578 H7C423 109 aa2.98□□□□□ -1.93
RDH11-204ENST00000553578 K7EQD1 137 aa2.98□□□□□ -1.93
RDH11-204ENST00000553578 GNLYP22749 145 aa2.98□□□□□ -1.93
RDH11-204ENST00000553578 XCL1P47992 114 aa2.98□□□□□ -1.93
RDH11-204ENST00000553578 LCE5AQ5TCM9 118 aa2.98□□□□□ -1.93
RDH11-204ENST00000553578 PRNTQ86SH4 94 aa2.98□□□□□ -1.93
RDH11-204ENST00000553578 CLEC2BQ92478 149 aa2.98□□□□□ -1.93
RDH11-204ENST00000553578 UPK3BQ9BT76 320 aa2.98□□□□□ -1.93
RDH11-204ENST00000553578 ZNF492Q9P255 531 aa2.98□□□□□ -1.93
RDH11-204ENST00000553578 XCL2Q9UBD3 114 aa2.98□□□□□ -1.93
RDH11-204ENST00000553578 TRAV23DV6A0A075B6W5 121 aa2.97□□□□□ -1.93
RDH11-204ENST00000553578 IGHV3-33P01772 117 aa2.97□□□□□ -1.93
RDH11-204ENST00000553578 CCKP06307 115 aa2.97□□□□□ -1.93
RDH11-204ENST00000553578 C5orf38Q86SI9 138 aa2.97□□□□□ -1.93
RDH11-204ENST00000553578 DYNAPQ8N1N2 210 aa2.97□□□□□ -1.93
RDH11-204ENST00000553578 CNEP1R1Q8N9A8 125 aa2.97□□□□□ -1.93
RDH11-204ENST00000553578 RNASE6Q93091 150 aaKnown RBP2.97□□□□□ -1.93
RDH11-204ENST00000553578 NOTCH3Q9UM47 2321 aa2.97□□□□□ -1.93
RDH11-204ENST00000553578 IGHV3-21A0A0B4J1V1 117 aa2.97□□□□□ -1.93
RDH11-204ENST00000553578 C2orf83Q53S99 150 aa2.97□□□□□ -1.93
RDH11-204ENST00000553578 PRR15Q8IV56 129 aa2.97□□□□□ -1.93
RDH11-204ENST00000553578 SPTSSBQ8NFR3 76 aa2.97□□□□□ -1.93
RDH11-204ENST00000553578 SPATA3Q8NHX4 192 aa2.97□□□□□ -1.93
RDH11-204ENST00000553578 GFRA4Q9GZZ7 299 aa2.97□□□□□ -1.93
RDH11-204ENST00000553578 SNURFQ9Y675 71 aa2.97□□□□□ -1.93
RDH11-204ENST00000553578 NBPF19A0A087WUL8 3843 aa2.97□□□□□ -1.93
RDH11-204ENST00000553578 ZNRF1Q8ND25 227 aa2.97□□□□□ -1.93
RDH11-204ENST00000553578 OCR1Q9BZK8 76 aa2.97□□□□□ -1.93
RDH11-204ENST00000553578 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.96□□□□□ -1.93
RDH11-204ENST00000553578 F8VRH5 84 aa2.96□□□□□ -1.93
RDH11-204ENST00000553578 F8WEM9 126 aa2.96□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms