RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 RBX1P62877 108 aa15.25■□□□□ 0.03
TDP1-206ENST00000553569 PKD1P98161 4303 aa15.24■□□□□ 0.03
TDP1-206ENST00000553569 A0A087WTM6 91 aa15.24■□□□□ 0.03
TDP1-206ENST00000553569 UBE2L6O14933 153 aa15.24■□□□□ 0.03
TDP1-206ENST00000553569 EREGO14944 169 aa15.24■□□□□ 0.03
TDP1-206ENST00000553569 PMCHP20382 165 aa15.24■□□□□ 0.03
TDP1-206ENST00000553569 ATP5L2Q7Z4Y8 100 aa15.24■□□□□ 0.03
TDP1-206ENST00000553569 TM2D2Q9BX73 214 aa15.24■□□□□ 0.03
TDP1-206ENST00000553569 I3L3M4 83 aa15.23■□□□□ 0.03
TDP1-206ENST00000553569 CRPP02741 224 aa15.23■□□□□ 0.03
TDP1-206ENST00000553569 APCSP02743 223 aa15.23■□□□□ 0.03
TDP1-206ENST00000553569 TMEM70Q9BUB7 260 aa15.23■□□□□ 0.03
TDP1-206ENST00000553569 KRTAP10-2P60368 255 aa15.22■□□□□ 0.03
TDP1-206ENST00000553569 CLPSL2Q6UWE3 100 aa15.22■□□□□ 0.03
TDP1-206ENST00000553569 NRACQ8N912 160 aa15.22■□□□□ 0.03
TDP1-206ENST00000553569 RMI2Q96E14 147 aa15.22■□□□□ 0.03
TDP1-206ENST00000553569 TMEM242Q9NWH2 141 aa15.22■□□□□ 0.03
TDP1-206ENST00000553569 IGKV2D-24A0A075B6R9 120 aa15.21■□□□□ 0.03
TDP1-206ENST00000553569 C16orf90A8MZG2 172 aa15.21■□□□□ 0.03
TDP1-206ENST00000553569 PPP1R17O96001 155 aa15.2■□□□□ 0.02
TDP1-206ENST00000553569 CKS2P33552 79 aa15.2■□□□□ 0.02
TDP1-206ENST00000553569 Q0VG73 95 aa15.2■□□□□ 0.02
TDP1-206ENST00000553569 PKHD1P08F94 4074 aa15.19■□□□□ 0.02
TDP1-206ENST00000553569 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.19■□□□□ 0.02
TDP1-206ENST00000553569 IGKV2-29A2NJV5 120 aaPredicted RBP15.19■□□□□ 0.02
TDP1-206ENST00000553569 TSHBP01222 138 aa15.19■□□□□ 0.02
TDP1-206ENST00000553569 POLR2KP53803 58 aaKnown RBP15.19■□□□□ 0.02
TDP1-206ENST00000553569 ENHOQ6UWT2 76 aa15.19■□□□□ 0.02
TDP1-206ENST00000553569 BTF3L4Q96K17 158 aa15.19■□□□□ 0.02
TDP1-206ENST00000553569 CTDSP1Q9GZU7 261 aa15.19■□□□□ 0.02
TDP1-206ENST00000553569 D6R8Y8 96 aa15.18■□□□□ 0.02
TDP1-206ENST00000553569 FUSP35637 526 aaKnown RBP eCLIP15.18■□□□□ 0.02
TDP1-206ENST00000553569 SUMO2P61956 95 aaKnown RBP15.18■□□□□ 0.02
TDP1-206ENST00000553569 LINC00269Q8N2A0 174 aa15.18■□□□□ 0.02
TDP1-206ENST00000553569 CARHSP1Q9Y2V2 147 aaKnown RBP15.18■□□□□ 0.02
TDP1-206ENST00000553569 DNAH11Q96DT5 4516 aa15.17■□□□□ 0.02
TDP1-206ENST00000553569 IGLV4-60A0A075B6I1 120 aa15.17■□□□□ 0.02
TDP1-206ENST00000553569 LRCOL1A6NCL2 159 aa15.17■□□□□ 0.02
TDP1-206ENST00000553569 C10orf91Q5T1B1 145 aa15.17■□□□□ 0.02
TDP1-206ENST00000553569 C20orf203Q8NBC4 194 aa15.17■□□□□ 0.02
TDP1-206ENST00000553569 C1orf43Q9BWL3 253 aa15.17■□□□□ 0.02
TDP1-206ENST00000553569 COX11Q9Y6N1 276 aa15.17■□□□□ 0.02
TDP1-206ENST00000553569 TRBV27A0A0K0K1C4 114 aa15.16■□□□□ 0.02
TDP1-206ENST00000553569 IMMP2LQ96T52 175 aa15.16■□□□□ 0.02
TDP1-206ENST00000553569 A0A1B0GUV1 79 aa15.15■□□□□ 0.02
TDP1-206ENST00000553569 VCYO14598 125 aa15.15■□□□□ 0.02
TDP1-206ENST00000553569 LECT2O14960 151 aa15.15■□□□□ 0.02
TDP1-206ENST00000553569 AMMECR1LQ6DCA0 310 aa15.15■□□□□ 0.02
TDP1-206ENST00000553569 C7orf77A4D0Y5 90 aa15.14■□□□□ 0.01
TDP1-206ENST00000553569 TNFRSF6BO95407 300 aa15.14■□□□□ 0.01
TDP1-206ENST00000553569 FCER1GP30273 86 aa15.14■□□□□ 0.01
TDP1-206ENST00000553569 WFDC2Q14508 124 aa15.14■□□□□ 0.01
TDP1-206ENST00000553569 MIAQ16674 131 aa15.14■□□□□ 0.01
TDP1-206ENST00000553569 RNASEKQ6P5S7 137 aaKnown RBP15.14■□□□□ 0.01
TDP1-206ENST00000553569 MAPKAPK5-AS1Q8N8E1 139 aa15.14■□□□□ 0.01
TDP1-206ENST00000553569 PRR34Q9NV39 138 aa15.14■□□□□ 0.01
TDP1-206ENST00000553569 NPYP01303 97 aa15.13■□□□□ 0.01
TDP1-206ENST00000553569 REG3AQ06141 175 aa15.13■□□□□ 0.01
TDP1-206ENST00000553569 CLRN3Q8NCR9 226 aa15.13■□□□□ 0.01
TDP1-206ENST00000553569 BAALCQ8WXS3 180 aa15.13■□□□□ 0.01
TDP1-206ENST00000553569 C20orf78Q9BR46 151 aa15.13■□□□□ 0.01
TDP1-206ENST00000553569 PPBPP02775 128 aa15.12■□□□□ 0.01
TDP1-206ENST00000553569 FGF6P10767 208 aa15.12■□□□□ 0.01
TDP1-206ENST00000553569 ORMDL3Q8N138 153 aa15.12■□□□□ 0.01
TDP1-206ENST00000553569 KIR2DL4Q99706 377 aa15.12■□□□□ 0.01
TDP1-206ENST00000553569 RPS10P5Q9NQ39 176 aa15.12■□□□□ 0.01
TDP1-206ENST00000553569 DYNC1H1Q14204 4646 aaKnown RBP15.12■□□□□ 0.01
TDP1-206ENST00000553569 TRBV24-1A0A075B6N3 115 aa15.11■□□□□ 0.01
TDP1-206ENST00000553569 H7C423 109 aa15.11■□□□□ 0.01
TDP1-206ENST00000553569 ESDP10768 282 aa15.11■□□□□ 0.01
TDP1-206ENST00000553569 S100PP25815 95 aa15.11■□□□□ 0.01
TDP1-206ENST00000553569 RHEBQ15382 184 aa15.11■□□□□ 0.01
TDP1-206ENST00000553569 TMEM136Q6ZRR5 245 aa15.11■□□□□ 0.01
TDP1-206ENST00000553569 Q8N814 137 aa15.11■□□□□ 0.01
TDP1-206ENST00000553569 HLA-DQA1P01909 254 aa15.1■□□□□ 0.01
TDP1-206ENST00000553569 PRELID3AQ96N28 172 aa15.1■□□□□ 0.01
TDP1-206ENST00000553569 SMIM2Q9BVW6 85 aa15.1■□□□□ 0.01
TDP1-206ENST00000553569 PGPEP1Q9NXJ5 209 aa15.1■□□□□ 0.01
TDP1-206ENST00000553569 IGLV10-54A0A075B6I4 117 aa15.09■□□□□ 0.01
TDP1-206ENST00000553569 IGKV3OR2-268A0A0C4DH90 116 aa15.09■□□□□ 0.01
TDP1-206ENST00000553569 APOC3P02656 99 aa15.09■□□□□ 0.01
TDP1-206ENST00000553569 TRAV9-1A0A075B6T8 112 aa15.08■□□□□ 0
TDP1-206ENST00000553569 PHOX2AO14813 284 aa15.08■□□□□ 0
TDP1-206ENST00000553569 RPL32P62910 135 aaKnown RBP15.08■□□□□ 0
TDP1-206ENST00000553569 NDUFA5Q16718 116 aa15.08■□□□□ 0
TDP1-206ENST00000553569 CDPF1Q6NVV7 123 aa15.08■□□□□ 0
TDP1-206ENST00000553569 ZNF25P17030 456 aaPredicted RBP15.07■□□□□ 0
TDP1-206ENST00000553569 TMEM101Q96IK0 257 aa15.07■□□□□ 0
TDP1-206ENST00000553569 IGLV5-52A0A0A0MRZ9 124 aa15.05■□□□□ -0
TDP1-206ENST00000553569 OR5A1Q8NGJ0 315 aa15.05■□□□□ -0
TDP1-206ENST00000553569 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.04■□□□□ -0
TDP1-206ENST00000553569 SVBPQ8N300 66 aa15.04■□□□□ -0
TDP1-206ENST00000553569 NTN5Q8WTR8 489 aaPredicted RBP15.04■□□□□ -0
TDP1-206ENST00000553569 TRAV8-4A0A0B4J246 113 aa15.03■□□□□ -0
TDP1-206ENST00000553569 TCAPO15273 167 aa15.03■□□□□ -0
TDP1-206ENST00000553569 KRTAP26-1Q6PEX3 210 aa15.03■□□□□ -0
TDP1-206ENST00000553569 MRPL52Q86TS9 123 aaKnown RBP15.03■□□□□ -0
TDP1-206ENST00000553569 MAP1LC3AQ9H492 121 aa15.03■□□□□ -0
TDP1-206ENST00000553569 LAMTOR2Q9Y2Q5 125 aa15.03■□□□□ -0
TDP1-206ENST00000553569 LOC389332A0A1B0GUA5 103 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms