RNA–Protein interactions for RNA: ENST00000553396.1

LINC00517-201, long intergenic non-protein coding RNA 517, humanhuman

TSL 3

Gene LINC00517, Length 774 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-201ENST00000553396 RPL39LQ96EH5 51 aaKnown RBP6.76□□□□□ -1.33
LINC00517-201ENST00000553396 KRTAP4-5Q9BYR2 181 aa6.76□□□□□ -1.33
LINC00517-201ENST00000553396 OSTCQ9NRP0 149 aa6.76□□□□□ -1.33
LINC00517-201ENST00000553396 COX11Q9Y6N1 276 aa6.76□□□□□ -1.33
LINC00517-201ENST00000553396 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.75□□□□□ -1.33
LINC00517-201ENST00000553396 PKIAP61925 76 aa6.75□□□□□ -1.33
LINC00517-201ENST00000553396 RPL23P62829 140 aaKnown RBP6.75□□□□□ -1.33
LINC00517-201ENST00000553396 RBX1P62877 108 aa6.75□□□□□ -1.33
LINC00517-201ENST00000553396 Q0VG73 95 aa6.75□□□□□ -1.33
LINC00517-201ENST00000553396 PEA15Q15121 130 aa6.75□□□□□ -1.33
LINC00517-201ENST00000553396 IQCJQ1A5X6 159 aa6.75□□□□□ -1.33
LINC00517-201ENST00000553396 FAM74A3Q4VXF1 159 aa6.75□□□□□ -1.33
LINC00517-201ENST00000553396 ENHOQ6UWT2 76 aa6.75□□□□□ -1.33
LINC00517-201ENST00000553396 NTN5Q8WTR8 489 aaPredicted RBP6.75□□□□□ -1.33
LINC00517-201ENST00000553396 C1orf43Q9BWL3 253 aa6.75□□□□□ -1.33
LINC00517-201ENST00000553396 KRTAP9-9Q9BYP9 154 aa6.75□□□□□ -1.33
LINC00517-201ENST00000553396 KRTAP9-4Q9BYQ2 154 aa6.75□□□□□ -1.33
LINC00517-201ENST00000553396 V9GYV3 84 aa6.75□□□□□ -1.33
LINC00517-201ENST00000553396 A0A1B0GUT8 65 aa6.74□□□□□ -1.33
LINC00517-201ENST00000553396 TMEM243Q9BU79 118 aa6.74□□□□□ -1.33
LINC00517-201ENST00000553396 GFRA4Q9GZZ7 299 aa6.74□□□□□ -1.33
LINC00517-201ENST00000553396 NAT8Q9UHE5 227 aa6.74□□□□□ -1.33
LINC00517-201ENST00000553396 ABCA13Q86UQ4 5058 aa6.73□□□□□ -1.33
LINC00517-201ENST00000553396 HLA-DQA1P01909 254 aa6.73□□□□□ -1.33
LINC00517-201ENST00000553396 AMTP48728 403 aa6.73□□□□□ -1.33
LINC00517-201ENST00000553396 HAMPP81172 84 aa6.73□□□□□ -1.33
LINC00517-201ENST00000553396 COTL1Q14019 142 aa6.73□□□□□ -1.33
LINC00517-201ENST00000553396 LINC00269Q8N2A0 174 aa6.73□□□□□ -1.33
LINC00517-201ENST00000553396 FAM231BA6NCW3 169 aa6.72□□□□□ -1.33
LINC00517-201ENST00000553396 UBE2L6O14933 153 aa6.72□□□□□ -1.33
LINC00517-201ENST00000553396 GAS8-AS1O95177 125 aa6.72□□□□□ -1.33
LINC00517-201ENST00000553396 XGP55808 180 aa6.72□□□□□ -1.33
LINC00517-201ENST00000553396 MIAQ16674 131 aa6.72□□□□□ -1.33
LINC00517-201ENST00000553396 Q8N1X5 172 aa6.72□□□□□ -1.33
LINC00517-201ENST00000553396 NUP35Q8NFH5 326 aa6.72□□□□□ -1.33
LINC00517-201ENST00000553396 FRZBQ92765 325 aa6.72□□□□□ -1.33
LINC00517-201ENST00000553396 SMDT1Q9H4I9 107 aa6.72□□□□□ -1.33
LINC00517-201ENST00000553396 IGLV4-60A0A075B6I1 120 aa6.71□□□□□ -1.34
LINC00517-201ENST00000553396 IGLV10-54A0A075B6I4 117 aa6.71□□□□□ -1.34
LINC00517-201ENST00000553396 SDHAF1A6NFY7 115 aa6.71□□□□□ -1.34
LINC00517-201ENST00000553396 REG3AQ06141 175 aa6.71□□□□□ -1.34
LINC00517-201ENST00000553396 LINC01620Q4KN68 170 aa6.71□□□□□ -1.34
LINC00517-201ENST00000553396 KRTAP19-1Q8IUB9 90 aa6.71□□□□□ -1.34
LINC00517-201ENST00000553396 AMN1Q8IY45 258 aa6.71□□□□□ -1.34
LINC00517-201ENST00000553396 C20orf203Q8NBC4 194 aa6.71□□□□□ -1.34
LINC00517-201ENST00000553396 RNF185Q96GF1 192 aa6.71□□□□□ -1.34
LINC00517-201ENST00000553396 TMEM191AQ9H0A3 160 aa6.71□□□□□ -1.34
LINC00517-201ENST00000553396 PRR34Q9NV39 138 aa6.71□□□□□ -1.34
LINC00517-201ENST00000553396 NAT8BQ9UHF3 227 aa6.71□□□□□ -1.34
LINC00517-201ENST00000553396 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.7□□□□□ -1.34
LINC00517-201ENST00000553396 IGKV2-29A2NJV5 120 aaPredicted RBP6.7□□□□□ -1.34
LINC00517-201ENST00000553396 NCR2O95944 276 aa6.7□□□□□ -1.34
LINC00517-201ENST00000553396 APCSP02743 223 aa6.7□□□□□ -1.34
LINC00517-201ENST00000553396 RAB4AP20338 218 aa6.7□□□□□ -1.34
LINC00517-201ENST00000553396 RPS10P46783 165 aaKnown RBP6.7□□□□□ -1.34
LINC00517-201ENST00000553396 RAB14P61106 215 aa6.7□□□□□ -1.34
LINC00517-201ENST00000553396 RIGQ13278 110 aa6.7□□□□□ -1.34
LINC00517-201ENST00000553396 A0A1B0GUV1 79 aa6.69□□□□□ -1.34
LINC00517-201ENST00000553396 SMKR1H3BMG3 65 aa6.69□□□□□ -1.34
LINC00517-201ENST00000553396 I3L3M4 83 aa6.69□□□□□ -1.34
LINC00517-201ENST00000553396 ST20Q9HBF5 79 aa6.69□□□□□ -1.34
LINC00517-201ENST00000553396 TMEM242Q9NWH2 141 aa6.69□□□□□ -1.34
LINC00517-201ENST00000553396 FAM30AQ9NZY2 134 aa6.69□□□□□ -1.34
LINC00517-201ENST00000553396 IGKV3OR2-268A0A0C4DH90 116 aa6.68□□□□□ -1.34
LINC00517-201ENST00000553396 TRBV6-5A0A0K0K1A5 114 aa6.68□□□□□ -1.34
LINC00517-201ENST00000553396 SMIM27A0A1W2PRY6 76 aa6.68□□□□□ -1.34
LINC00517-201ENST00000553396 USP17L23D6RBM5 183 aa6.68□□□□□ -1.34
LINC00517-201ENST00000553396 SMR3BP02814 79 aaPredicted RBP6.68□□□□□ -1.34
LINC00517-201ENST00000553396 PMCHP20382 165 aa6.68□□□□□ -1.34
LINC00517-201ENST00000553396 CAMPP49913 170 aa6.68□□□□□ -1.34
LINC00517-201ENST00000553396 AMMECR1LQ6DCA0 310 aa6.68□□□□□ -1.34
LINC00517-201ENST00000553396 RNASEKQ6P5S7 137 aaKnown RBP6.68□□□□□ -1.34
LINC00517-201ENST00000553396 MRAP2Q96G30 205 aa6.68□□□□□ -1.34
LINC00517-201ENST00000553396 TMEM70Q9BUB7 260 aa6.68□□□□□ -1.34
LINC00517-201ENST00000553396 FAT1Q14517 4588 aa6.68□□□□□ -1.34
LINC00517-201ENST00000553396 EPM2AB3EWF7 344 aa6.67□□□□□ -1.34
LINC00517-201ENST00000553396 FAM229AH3BQW9 127 aa6.67□□□□□ -1.34
LINC00517-201ENST00000553396 TSHBP01222 138 aa6.67□□□□□ -1.34
LINC00517-201ENST00000553396 C14orf177Q52M58 125 aa6.67□□□□□ -1.34
LINC00517-201ENST00000553396 MRPL54Q6P161 138 aaKnown RBP6.67□□□□□ -1.34
LINC00517-201ENST00000553396 KRTAP26-1Q6PEX3 210 aa6.67□□□□□ -1.34
LINC00517-201ENST00000553396 TRAV8-4A0A0B4J246 113 aa6.66□□□□□ -1.34
LINC00517-201ENST00000553396 FGF6P10767 208 aa6.66□□□□□ -1.34
LINC00517-201ENST00000553396 MRPL51Q4U2R6 128 aaKnown RBP6.66□□□□□ -1.34
LINC00517-201ENST00000553396 Q5VSD8 79 aa6.66□□□□□ -1.34
LINC00517-201ENST00000553396 DNAH8Q96JB1 4490 aa6.66□□□□□ -1.34
LINC00517-201ENST00000553396 KRTAP4-8A0A0G2JLE6 195 aa6.65□□□□□ -1.34
LINC00517-201ENST00000553396 PRSS1P07477 247 aa6.65□□□□□ -1.34
LINC00517-201ENST00000553396 POLR2KP53803 58 aaKnown RBP6.65□□□□□ -1.34
LINC00517-201ENST00000553396 CLLU1Q5K131 121 aa6.65□□□□□ -1.34
LINC00517-201ENST00000553396 FAM104BQ5XKR9 115 aa6.65□□□□□ -1.34
LINC00517-201ENST00000553396 NRACQ8N912 160 aa6.65□□□□□ -1.34
LINC00517-201ENST00000553396 TRBV27A0A0K0K1C4 114 aa6.64□□□□□ -1.35
LINC00517-201ENST00000553396 A0A1B0GW15 77 aa6.64□□□□□ -1.35
LINC00517-201ENST00000553396 H7C423 109 aa6.64□□□□□ -1.35
LINC00517-201ENST00000553396 ESDP10768 282 aa6.64□□□□□ -1.35
LINC00517-201ENST00000553396 FCER1GP30273 86 aa6.64□□□□□ -1.35
LINC00517-201ENST00000553396 SUMO2P61956 95 aaKnown RBP6.64□□□□□ -1.35
LINC00517-201ENST00000553396 HBBP68871 147 aa6.64□□□□□ -1.35
LINC00517-201ENST00000553396 Q6ZSA8 131 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms