RNA–Protein interactions for RNA: ENST00000553335.5

TMEM260-204, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 560 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-204ENST00000553335 IGHV3-38A0A0C4DH36 116 aa6.74□□□□□ -1.33
TMEM260-204ENST00000553335 PRSS47A8MTI9 375 aa6.74□□□□□ -1.33
TMEM260-204ENST00000553335 TRGC2P03986 189 aa6.74□□□□□ -1.33
TMEM260-204ENST00000553335 POLR2KP53803 58 aaKnown RBP6.74□□□□□ -1.33
TMEM260-204ENST00000553335 CCL18P55774 89 aa6.74□□□□□ -1.33
TMEM260-204ENST00000553335 RPL32P62910 135 aaKnown RBP6.74□□□□□ -1.33
TMEM260-204ENST00000553335 COTL1Q14019 142 aa6.74□□□□□ -1.33
TMEM260-204ENST00000553335 LYPD5Q6UWN5 251 aa6.74□□□□□ -1.33
TMEM260-204ENST00000553335 KIR2DL4Q99706 377 aa6.74□□□□□ -1.33
TMEM260-204ENST00000553335 TMEM70Q9BUB7 260 aa6.74□□□□□ -1.33
TMEM260-204ENST00000553335 C1orf43Q9BWL3 253 aa6.74□□□□□ -1.33
TMEM260-204ENST00000553335 STARD9Q9P2P6 4700 aa6.74□□□□□ -1.33
TMEM260-204ENST00000553335 TRBV27A0A0K0K1C4 114 aa6.73□□□□□ -1.33
TMEM260-204ENST00000553335 LOC389332A0A1B0GUA5 103 aa6.73□□□□□ -1.33
TMEM260-204ENST00000553335 TCAPO15273 167 aa6.73□□□□□ -1.33
TMEM260-204ENST00000553335 TIRAPP58753 221 aa6.73□□□□□ -1.33
TMEM260-204ENST00000553335 LINC00310P59036 64 aa6.73□□□□□ -1.33
TMEM260-204ENST00000553335 ESRGQ1W209 222 aa6.73□□□□□ -1.33
TMEM260-204ENST00000553335 UBE2DNLQ8IWF7 75 aa6.73□□□□□ -1.33
TMEM260-204ENST00000553335 SMIM2Q9BVW6 85 aa6.73□□□□□ -1.33
TMEM260-204ENST00000553335 TRBV25-1A0A075B6N4 114 aa6.72□□□□□ -1.33
TMEM260-204ENST00000553335 TRAV8-6A0A0B4J262 113 aa6.72□□□□□ -1.33
TMEM260-204ENST00000553335 FCER1GP30273 86 aa6.72□□□□□ -1.33
TMEM260-204ENST00000553335 LELP1Q5T871 98 aa6.72□□□□□ -1.33
TMEM260-204ENST00000553335 Q8N8P6 123 aa6.72□□□□□ -1.33
TMEM260-204ENST00000553335 PRSS3P2Q8NHM4 247 aa6.72□□□□□ -1.33
TMEM260-204ENST00000553335 NXT2Q9NPJ8 142 aaKnown RBP6.72□□□□□ -1.33
TMEM260-204ENST00000553335 TRBV6-8A0A0A6YYG3 113 aa6.71□□□□□ -1.34
TMEM260-204ENST00000553335 IGHV1-24A0A0C4DH33 117 aa6.71□□□□□ -1.34
TMEM260-204ENST00000553335 K7EMI3 77 aa6.71□□□□□ -1.34
TMEM260-204ENST00000553335 RAB5BP61020 215 aa6.71□□□□□ -1.34
TMEM260-204ENST00000553335 C18orf32Q8TCD1 76 aa6.71□□□□□ -1.34
TMEM260-204ENST00000553335 PRSS29PA6NIE9 313 aa6.7□□□□□ -1.34
TMEM260-204ENST00000553335 C1orf196B1AJZ1 125 aa6.7□□□□□ -1.34
TMEM260-204ENST00000553335 IFI27P40305 119 aaPredicted RBP6.7□□□□□ -1.34
TMEM260-204ENST00000553335 AMTP48728 403 aa6.7□□□□□ -1.34
TMEM260-204ENST00000553335 FAM30AQ9NZY2 134 aa6.7□□□□□ -1.34
TMEM260-204ENST00000553335 MRPS16Q9Y3D3 137 aaKnown RBP6.7□□□□□ -1.34
TMEM260-204ENST00000553335 LINC00588Q9Y4M8 146 aa6.7□□□□□ -1.34
TMEM260-204ENST00000553335 IGLV2-18A0A075B6J9 118 aa6.69□□□□□ -1.34
TMEM260-204ENST00000553335 B5MCH6 92 aa6.69□□□□□ -1.34
TMEM260-204ENST00000553335 UBE2L6O14933 153 aa6.69□□□□□ -1.34
TMEM260-204ENST00000553335 TSHBP01222 138 aa6.69□□□□□ -1.34
TMEM260-204ENST00000553335 G0S2P27469 103 aa6.69□□□□□ -1.34
TMEM260-204ENST00000553335 PKIAP61925 76 aa6.69□□□□□ -1.34
TMEM260-204ENST00000553335 IQCJQ1A5X6 159 aa6.69□□□□□ -1.34
TMEM260-204ENST00000553335 ORMDL2Q53FV1 153 aa6.69□□□□□ -1.34
TMEM260-204ENST00000553335 LGALS9CQ6DKI2 356 aa6.69□□□□□ -1.34
TMEM260-204ENST00000553335 NTM-AS1Q6ZSK4 140 aa6.69□□□□□ -1.34
TMEM260-204ENST00000553335 FA2HQ7L5A8 372 aa6.69□□□□□ -1.34
TMEM260-204ENST00000553335 DEFB104AQ8WTQ1 72 aa6.69□□□□□ -1.34
TMEM260-204ENST00000553335 TMEM18Q96B42 140 aa6.69□□□□□ -1.34
TMEM260-204ENST00000553335 UPK3BQ9BT76 320 aa6.69□□□□□ -1.34
TMEM260-204ENST00000553335 TMEM243Q9BU79 118 aa6.69□□□□□ -1.34
TMEM260-204ENST00000553335 KMT2CQ8NEZ4 4911 aaKnown RBP6.68□□□□□ -1.34
TMEM260-204ENST00000553335 H7C423 109 aa6.68□□□□□ -1.34
TMEM260-204ENST00000553335 LINC00614P0C842 121 aa6.68□□□□□ -1.34
TMEM260-204ENST00000553335 SMAGPQ0VAQ4 97 aa6.68□□□□□ -1.34
TMEM260-204ENST00000553335 Q0VG73 95 aa6.68□□□□□ -1.34
TMEM260-204ENST00000553335 LAGE3Q14657 143 aa6.68□□□□□ -1.34
TMEM260-204ENST00000553335 NIT1Q86X76 327 aa6.68□□□□□ -1.34
TMEM260-204ENST00000553335 BAGE3Q86Y29 109 aa6.68□□□□□ -1.34
TMEM260-204ENST00000553335 CHCHD5Q9BSY4 110 aa6.68□□□□□ -1.34
TMEM260-204ENST00000553335 TMEM262E9PQX1 116 aa6.67□□□□□ -1.34
TMEM260-204ENST00000553335 SIVA1O15304 175 aa6.67□□□□□ -1.34
TMEM260-204ENST00000553335 ESDP10768 282 aa6.67□□□□□ -1.34
TMEM260-204ENST00000553335 CHCHD7Q9BUK0 85 aa6.67□□□□□ -1.34
TMEM260-204ENST00000553335 A0A087WX48 190 aa6.66□□□□□ -1.34
TMEM260-204ENST00000553335 LINC01546A6NGU7 62 aa6.66□□□□□ -1.34
TMEM260-204ENST00000553335 LINC01549A6NIU2 74 aa6.66□□□□□ -1.34
TMEM260-204ENST00000553335 HIST1H2BKO60814 126 aa6.66□□□□□ -1.34
TMEM260-204ENST00000553335 LY6G6CO95867 125 aa6.66□□□□□ -1.34
TMEM260-204ENST00000553335 HIST1H2BJP06899 126 aa6.66□□□□□ -1.34
TMEM260-204ENST00000553335 HIST1H2BOP23527 126 aa6.66□□□□□ -1.34
TMEM260-204ENST00000553335 HIST1H2BBP33778 126 aa6.66□□□□□ -1.34
TMEM260-204ENST00000553335 HIST1H2BDP58876 126 aa6.66□□□□□ -1.34
TMEM260-204ENST00000553335 HIST1H2BCP62807 126 aa6.66□□□□□ -1.34
TMEM260-204ENST00000553335 GAGE6Q13070 117 aa6.66□□□□□ -1.34
TMEM260-204ENST00000553335 HIST2H2BEQ16778 126 aa6.66□□□□□ -1.34
TMEM260-204ENST00000553335 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.66□□□□□ -1.34
TMEM260-204ENST00000553335 RNASEKQ6P5S7 137 aaKnown RBP6.66□□□□□ -1.34
TMEM260-204ENST00000553335 WFDC10BQ8IUB3 73 aa6.66□□□□□ -1.34
TMEM260-204ENST00000553335 C20orf203Q8NBC4 194 aa6.66□□□□□ -1.34
TMEM260-204ENST00000553335 LINC00476Q8WZB0 136 aa6.66□□□□□ -1.34
TMEM260-204ENST00000553335 HIST1H2BHQ93079 126 aa6.66□□□□□ -1.34
TMEM260-204ENST00000553335 CHCHD1Q96BP2 118 aaKnown RBP6.66□□□□□ -1.34
TMEM260-204ENST00000553335 HIST1H2BNQ99877 126 aa6.66□□□□□ -1.34
TMEM260-204ENST00000553335 HIST1H2BMQ99879 126 aa6.66□□□□□ -1.34
TMEM260-204ENST00000553335 Q9H8V8 135 aa6.66□□□□□ -1.34
TMEM260-204ENST00000553335 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.65□□□□□ -1.34
TMEM260-204ENST00000553335 IGKV2-29A2NJV5 120 aaPredicted RBP6.65□□□□□ -1.34
TMEM260-204ENST00000553335 BTF3P20290 206 aaKnown RBP6.65□□□□□ -1.34
TMEM260-204ENST00000553335 AMMECR1LQ6DCA0 310 aa6.65□□□□□ -1.34
TMEM260-204ENST00000553335 URB1-AS1Q96HZ7 61 aa6.65□□□□□ -1.34
TMEM260-204ENST00000553335 CYSLTR1Q9Y271 337 aa6.65□□□□□ -1.34
TMEM260-204ENST00000553335 TRAV9-2A0A087WT02 112 aa6.64□□□□□ -1.35
TMEM260-204ENST00000553335 K7EP13 123 aa6.64□□□□□ -1.35
TMEM260-204ENST00000553335 HSBP1O75506 76 aa6.64□□□□□ -1.35
TMEM260-204ENST00000553335 DNAH10OSP0CZ25 163 aa6.64□□□□□ -1.35
TMEM260-204ENST00000553335 ZNF25P17030 456 aaPredicted RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms