RNA–Protein interactions for RNA: ENST00000552973.1

NEK3-204, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-204ENST00000552973 AMTP48728 403 aa7.31□□□□□ -1.24
NEK3-204ENST00000552973 SULT1A2P50226 295 aa7.31□□□□□ -1.24
NEK3-204ENST00000552973 CNBPP62633 177 aaKnown RBP7.31□□□□□ -1.24
NEK3-204ENST00000552973 DPH3P1Q9H4G8 78 aa7.31□□□□□ -1.24
NEK3-204ENST00000552973 TRBV20OR9-2A0A075B6H5 130 aa7.3□□□□□ -1.24
NEK3-204ENST00000552973 IGHV3-64A0A075B6Q5 118 aa7.3□□□□□ -1.24
NEK3-204ENST00000552973 A0A087WYN8 130 aa7.3□□□□□ -1.24
NEK3-204ENST00000552973 TRAV1-1A0A0B4J248 108 aa7.3□□□□□ -1.24
NEK3-204ENST00000552973 TRAV26-2A0A0B4J265 109 aa7.3□□□□□ -1.24
NEK3-204ENST00000552973 XKRY2A2RUG3 117 aa7.3□□□□□ -1.24
NEK3-204ENST00000552973 GAGE12HA6NDE8 117 aa7.3□□□□□ -1.24
NEK3-204ENST00000552973 COTL1Q14019 142 aa7.3□□□□□ -1.24
NEK3-204ENST00000552973 TWIST1Q15672 202 aa7.3□□□□□ -1.24
NEK3-204ENST00000552973 NUDT10Q8NFP7 164 aa7.3□□□□□ -1.24
NEK3-204ENST00000552973 NUDT11Q96G61 164 aa7.3□□□□□ -1.24
NEK3-204ENST00000552973 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.29□□□□□ -1.24
NEK3-204ENST00000552973 TEX46H3BTG2 121 aa7.29□□□□□ -1.24
NEK3-204ENST00000552973 MEF2BQ02080 365 aaPredicted RBP7.29□□□□□ -1.24
NEK3-204ENST00000552973 CIRBPQ14011 172 aaKnown RBP7.29□□□□□ -1.24
NEK3-204ENST00000552973 HIGD2BQ4VC39 106 aa7.29□□□□□ -1.24
NEK3-204ENST00000552973 WDR73Q6P4I2 378 aa7.29□□□□□ -1.24
NEK3-204ENST00000552973 C9orf62Q8N4C0 152 aa7.29□□□□□ -1.24
NEK3-204ENST00000552973 PGLYRP4Q96LB8 373 aa7.29□□□□□ -1.24
NEK3-204ENST00000552973 LCE2BO14633 110 aa7.28□□□□□ -1.24
NEK3-204ENST00000552973 PDE6DO43924 150 aa7.28□□□□□ -1.24
NEK3-204ENST00000552973 MT1HL1P0DM35 61 aa7.28□□□□□ -1.24
NEK3-204ENST00000552973 SMCPP49901 116 aaPredicted RBP7.28□□□□□ -1.24
NEK3-204ENST00000552973 GATD1Q8NB37 220 aa7.28□□□□□ -1.24
NEK3-204ENST00000552973 SMIM12Q96EX1 92 aa7.28□□□□□ -1.24
NEK3-204ENST00000552973 RNASE7Q9H1E1 156 aaKnown RBP7.28□□□□□ -1.24
NEK3-204ENST00000552973 UBR4Q5T4S7 5183 aa7.28□□□□□ -1.24
NEK3-204ENST00000552973 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.27□□□□□ -1.25
NEK3-204ENST00000552973 IGKV2-29A2NJV5 120 aaPredicted RBP7.27□□□□□ -1.25
NEK3-204ENST00000552973 BCL2P10415 239 aa7.27□□□□□ -1.25
NEK3-204ENST00000552973 FOXA3P55318 350 aaPredicted RBP7.27□□□□□ -1.25
NEK3-204ENST00000552973 COX6A2Q02221 97 aa7.27□□□□□ -1.25
NEK3-204ENST00000552973 EIF5AL1Q6IS14 154 aaKnown RBP7.27□□□□□ -1.25
NEK3-204ENST00000552973 Q6ZNX1 250 aa7.27□□□□□ -1.25
NEK3-204ENST00000552973 Q6ZRU5 148 aa7.27□□□□□ -1.25
NEK3-204ENST00000552973 C15orf56Q8N910 161 aa7.27□□□□□ -1.25
NEK3-204ENST00000552973 SPACA4Q8TDM5 124 aa7.27□□□□□ -1.25
NEK3-204ENST00000552973 RPL39LQ96EH5 51 aaKnown RBP7.27□□□□□ -1.25
NEK3-204ENST00000552973 BIN3Q9NQY0 253 aa7.27□□□□□ -1.25
NEK3-204ENST00000552973 IGKV2-24A0A0C4DH68 120 aa7.26□□□□□ -1.25
NEK3-204ENST00000552973 PHOX2AO14813 284 aa7.26□□□□□ -1.25
NEK3-204ENST00000552973 CTRLP40313 264 aa7.26□□□□□ -1.25
NEK3-204ENST00000552973 AMMECR1LQ6DCA0 310 aa7.26□□□□□ -1.25
NEK3-204ENST00000552973 RNASEKQ6P5S7 137 aaKnown RBP7.26□□□□□ -1.25
NEK3-204ENST00000552973 CFAP161Q6P656 301 aa7.26□□□□□ -1.25
NEK3-204ENST00000552973 PRSS3P2Q8NHM4 247 aa7.26□□□□□ -1.25
NEK3-204ENST00000552973 OCC1Q8TAD7 63 aa7.26□□□□□ -1.25
NEK3-204ENST00000552973 RPP21Q9H633 154 aaKnown RBP7.26□□□□□ -1.25
NEK3-204ENST00000552973 K7EN84 100 aa7.25□□□□□ -1.25
NEK3-204ENST00000552973 RPS10P46783 165 aaKnown RBP7.25□□□□□ -1.25
NEK3-204ENST00000552973 MAJINQ3KP22 176 aa7.25□□□□□ -1.25
NEK3-204ENST00000552973 GTSF1Q8WW33 167 aa7.25□□□□□ -1.25
NEK3-204ENST00000552973 CHCHD10Q8WYQ3 142 aaPredicted RBP7.25□□□□□ -1.25
NEK3-204ENST00000552973 RNF185Q96GF1 192 aa7.25□□□□□ -1.25
NEK3-204ENST00000552973 NDUFS6O75380 124 aaKnown RBP7.24□□□□□ -1.25
NEK3-204ENST00000552973 LYPD6BQ8NI32 183 aa7.24□□□□□ -1.25
NEK3-204ENST00000552973 PLAC8Q9NZF1 115 aa7.24□□□□□ -1.25
NEK3-204ENST00000552973 PKHD1L1Q86WI1 4243 aa7.24□□□□□ -1.25
NEK3-204ENST00000552973 APCSP02743 223 aa7.23□□□□□ -1.25
NEK3-204ENST00000552973 FGF6P10767 208 aa7.23□□□□□ -1.25
NEK3-204ENST00000552973 C7orf33Q8WU49 177 aa7.23□□□□□ -1.25
NEK3-204ENST00000552973 CNFNQ9BYD5 112 aa7.23□□□□□ -1.25
NEK3-204ENST00000552973 SDHAF1A6NFY7 115 aa7.22□□□□□ -1.25
NEK3-204ENST00000552973 GAS8-AS1O95177 125 aa7.22□□□□□ -1.25
NEK3-204ENST00000552973 PMCHP20382 165 aa7.22□□□□□ -1.25
NEK3-204ENST00000552973 XCL1P47992 114 aa7.22□□□□□ -1.25
NEK3-204ENST00000552973 FOXI1Q12951 378 aa7.22□□□□□ -1.25
NEK3-204ENST00000552973 SMIM15Q7Z3B0 74 aa7.22□□□□□ -1.25
NEK3-204ENST00000552973 STPG4Q8N801 248 aa7.22□□□□□ -1.25
NEK3-204ENST00000552973 LINC00526Q96FQ7 95 aa7.22□□□□□ -1.25
NEK3-204ENST00000552973 FAM231BA6NCW3 169 aa7.21□□□□□ -1.26
NEK3-204ENST00000552973 GATCO43716 136 aaKnown RBP7.21□□□□□ -1.26
NEK3-204ENST00000552973 NCR2O95944 276 aa7.21□□□□□ -1.26
NEK3-204ENST00000552973 ODF1Q14990 250 aa7.21□□□□□ -1.26
NEK3-204ENST00000552973 SLC51BQ86UW2 128 aa7.21□□□□□ -1.26
NEK3-204ENST00000552973 A0A096LNI7 61 aa7.2□□□□□ -1.26
NEK3-204ENST00000552973 GVQW2A0A096LPI5 108 aaPredicted RBP7.2□□□□□ -1.26
NEK3-204ENST00000552973 I3L3M4 83 aa7.2□□□□□ -1.26
NEK3-204ENST00000552973 CEBPGP53567 150 aa7.2□□□□□ -1.26
NEK3-204ENST00000552973 BTF3L4Q96K17 158 aa7.2□□□□□ -1.26
NEK3-204ENST00000552973 LINC00959A0A1B0GUT2 108 aa7.19□□□□□ -1.26
NEK3-204ENST00000552973 H7C423 109 aa7.19□□□□□ -1.26
NEK3-204ENST00000552973 CCL25O15444 150 aa7.19□□□□□ -1.26
NEK3-204ENST00000552973 TAGLN2P37802 199 aaKnown RBP7.19□□□□□ -1.26
NEK3-204ENST00000552973 TEX261Q6UWH6 196 aa7.19□□□□□ -1.26
NEK3-204ENST00000552973 TCTE3Q8IZS6 198 aa7.19□□□□□ -1.26
NEK3-204ENST00000552973 OR5A1Q8NGJ0 315 aa7.19□□□□□ -1.26
NEK3-204ENST00000552973 TMEM101Q96IK0 257 aa7.19□□□□□ -1.26
NEK3-204ENST00000552973 TMEM242Q9NWH2 141 aa7.19□□□□□ -1.26
NEK3-204ENST00000552973 TSHBP01222 138 aa7.18□□□□□ -1.26
NEK3-204ENST00000552973 PRR3P79522 188 aaKnown RBP7.18□□□□□ -1.26
NEK3-204ENST00000552973 ST20Q9HBF5 79 aa7.18□□□□□ -1.26
NEK3-204ENST00000552973 TRBV6-5A0A0K0K1A5 114 aa7.17□□□□□ -1.26
NEK3-204ENST00000552973 A8MWL6 223 aa7.17□□□□□ -1.26
NEK3-204ENST00000552973 ESDP10768 282 aa7.17□□□□□ -1.26
NEK3-204ENST00000552973 ZNF25P17030 456 aaPredicted RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms