RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 TMEM262E9PQX1 116 aa9.19□□□□□ -0.94
HDAC7-230ENST00000552960 VCX2Q9H322 139 aa9.19□□□□□ -0.94
HDAC7-230ENST00000552960 TEX49A0A1B0GTD5 131 aa9.18□□□□□ -0.94
HDAC7-230ENST00000552960 IGHV3-33P01772 117 aa9.18□□□□□ -0.94
HDAC7-230ENST00000552960 TIMM17AQ99595 171 aa9.18□□□□□ -0.94
HDAC7-230ENST00000552960 CEMP1Q6PRD7 247 aaPredicted RBP9.18□□□□□ -0.94
HDAC7-230ENST00000552960 SHISA2Q6UWI4 295 aa9.18□□□□□ -0.94
HDAC7-230ENST00000552960 NIPBLQ6KC79 2804 aaeCLIP9.18□□□□□ -0.942e-6■■■■■ 44.5
HDAC7-230ENST00000552960 IGHV4OR15-8A0A075B7B6 117 aa9.18□□□□□ -0.94
HDAC7-230ENST00000552960 A0A087WW49 117 aa9.18□□□□□ -0.94
HDAC7-230ENST00000552960 SPINK13Q1W4C9 94 aa9.18□□□□□ -0.94
HDAC7-230ENST00000552960 C11orf44Q8N8P7 122 aa9.18□□□□□ -0.94
HDAC7-230ENST00000552960 NHLRC4P0CG21 123 aaPredicted RBP9.17□□□□□ -0.94
HDAC7-230ENST00000552960 TRAV8-3A0A0A6YYJ7 113 aa9.17□□□□□ -0.94
HDAC7-230ENST00000552960 GAGE12JA6NER3 117 aa9.17□□□□□ -0.94
HDAC7-230ENST00000552960 EIF4EBP3O60516 100 aaPredicted RBP9.17□□□□□ -0.94
HDAC7-230ENST00000552960 GAGE7O76087 117 aa9.17□□□□□ -0.94
HDAC7-230ENST00000552960 GAGE12FP0CL80 117 aa9.17□□□□□ -0.94
HDAC7-230ENST00000552960 GAGE12GP0CL81 117 aa9.17□□□□□ -0.94
HDAC7-230ENST00000552960 GAGE12IP0CL82 117 aa9.17□□□□□ -0.94
HDAC7-230ENST00000552960 GAGE4Q13068 117 aa9.17□□□□□ -0.94
HDAC7-230ENST00000552960 MED14OSP0DP75 135 aa9.16□□□□□ -0.94
HDAC7-230ENST00000552960 NDUFV3P56181 108 aaKnown RBP9.16□□□□□ -0.94
HDAC7-230ENST00000552960 Q8N1Y9 231 aa9.16□□□□□ -0.94
HDAC7-230ENST00000552960 AMELXQ99217 191 aa9.16□□□□□ -0.94
HDAC7-230ENST00000552960 DAZ1Q9NQZ3 744 aaKnown RBP9.16□□□□□ -0.94
HDAC7-230ENST00000552960 A8MZ25 164 aa9.16□□□□□ -0.94
HDAC7-230ENST00000552960 B4DSR2 109 aa9.16□□□□□ -0.94
HDAC7-230ENST00000552960 ID1P41134 155 aa9.16□□□□□ -0.94
HDAC7-230ENST00000552960 Q6ZSV7 163 aa9.16□□□□□ -0.94
HDAC7-230ENST00000552960 P0DMU3 169 aa9.16□□□□□ -0.94
HDAC7-230ENST00000552960 FAM231AP0DMU4 169 aa9.16□□□□□ -0.94
HDAC7-230ENST00000552960 FAM231CP0DMU5 169 aa9.16□□□□□ -0.94
HDAC7-230ENST00000552960 ZNF22P17026 224 aaPredicted RBP9.16□□□□□ -0.94
HDAC7-230ENST00000552960 C15orf53Q8NAA6 179 aa9.16□□□□□ -0.94
HDAC7-230ENST00000552960 TRBV27A0A0K0K1C4 114 aa9.15□□□□□ -0.94
HDAC7-230ENST00000552960 RHODO00212 210 aa9.15□□□□□ -0.94
HDAC7-230ENST00000552960 LEPROTO15243 131 aa9.15□□□□□ -0.94
HDAC7-230ENST00000552960 TMEM263Q8WUH6 116 aaKnown RBP9.15□□□□□ -0.94
HDAC7-230ENST00000552960 TMEM223A0PJW6 202 aa9.15□□□□□ -0.94
HDAC7-230ENST00000552960 KNCNA6PVL3 124 aa9.15□□□□□ -0.94
HDAC7-230ENST00000552960 CD28P10747 220 aa9.15□□□□□ -0.94
HDAC7-230ENST00000552960 IFITM1P13164 125 aa9.15□□□□□ -0.94
HDAC7-230ENST00000552960 LINC01620Q4KN68 170 aa9.15□□□□□ -0.94
HDAC7-230ENST00000552960 ATXN8Q156A1 80 aa9.14□□□□□ -0.95
HDAC7-230ENST00000552960 KLLNB2CW77 178 aa9.14□□□□□ -0.95
HDAC7-230ENST00000552960 M0QY20 66 aa9.14□□□□□ -0.95
HDAC7-230ENST00000552960 IGHV4-59P01825 116 aa9.14□□□□□ -0.95
HDAC7-230ENST00000552960 C10orf99Q6UWK7 81 aa9.14□□□□□ -0.95
HDAC7-230ENST00000552960 FAM19A4Q96LR4 140 aa9.14□□□□□ -0.95
HDAC7-230ENST00000552960 Q96MF0 132 aa9.14□□□□□ -0.95
HDAC7-230ENST00000552960 TRAV8-4A0A0B4J246 113 aa9.14□□□□□ -0.95
HDAC7-230ENST00000552960 TRBV7-9A0A0J9YWB2 115 aa9.14□□□□□ -0.95
HDAC7-230ENST00000552960 A0A0U1RRA0 63 aa9.14□□□□□ -0.95
HDAC7-230ENST00000552960 PRM2P04554 102 aa9.14□□□□□ -0.95
HDAC7-230ENST00000552960 DEFB112Q30KQ8 113 aa9.14□□□□□ -0.95
HDAC7-230ENST00000552960 ANK3Q12955 4377 aaKnown RBP9.13□□□□□ -0.95
HDAC7-230ENST00000552960 CR1P17927 2039 aa9.13□□□□□ -0.95
HDAC7-230ENST00000552960 TRIAP1O43715 76 aa9.13□□□□□ -0.95
HDAC7-230ENST00000552960 C2orf82Q6UX34 121 aa9.13□□□□□ -0.95
HDAC7-230ENST00000552960 SBSPONQ8IVN8 264 aa9.13□□□□□ -0.95
HDAC7-230ENST00000552960 DAND5Q8N907 189 aa9.13□□□□□ -0.95
HDAC7-230ENST00000552960 TIMM21Q9BVV7 248 aa9.13□□□□□ -0.95
HDAC7-230ENST00000552960 A0A0J9YXY3 114 aa9.13□□□□□ -0.95
HDAC7-230ENST00000552960 PLA2G2AP14555 144 aa9.13□□□□□ -0.95
HDAC7-230ENST00000552960 PROK1P58294 105 aa9.13□□□□□ -0.95
HDAC7-230ENST00000552960 DEFB113Q30KQ7 82 aa9.13□□□□□ -0.95
HDAC7-230ENST00000552960 C20orf203Q8NBC4 194 aa9.13□□□□□ -0.95
HDAC7-230ENST00000552960 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.12□□□□□ -0.95
HDAC7-230ENST00000552960 IGHV3-30-3P0DP02 117 aa9.12□□□□□ -0.95
HDAC7-230ENST00000552960 KRTAP1-3Q8IUG1 177 aa9.12□□□□□ -0.95
HDAC7-230ENST00000552960 WFDC11Q8NEX6 87 aa9.12□□□□□ -0.95
HDAC7-230ENST00000552960 CLEC2BQ92478 149 aa9.12□□□□□ -0.95
HDAC7-230ENST00000552960 USMG5Q96IX5 58 aa9.12□□□□□ -0.95
HDAC7-230ENST00000552960 IGLV4-3A0A075B6K6 122 aa9.12□□□□□ -0.95
HDAC7-230ENST00000552960 IGHV3-16A0A0C4DH30 117 aa9.12□□□□□ -0.95
HDAC7-230ENST00000552960 LGALS9O00182 355 aa9.12□□□□□ -0.95
HDAC7-230ENST00000552960 NXPH4O95158 308 aa9.12□□□□□ -0.95
HDAC7-230ENST00000552960 I3L3M4 83 aa9.12□□□□□ -0.95
HDAC7-230ENST00000552960 KLK9Q2XQG4 91 aa9.12□□□□□ -0.95
HDAC7-230ENST00000552960 LINC01356Q8N9X3 169 aa9.12□□□□□ -0.95
HDAC7-230ENST00000552960 DUX3Q96PT4 197 aa9.12□□□□□ -0.95
HDAC7-230ENST00000552960 CITED1Q99966 193 aa9.12□□□□□ -0.95
HDAC7-230ENST00000552960 M0R2P5 195 aa9.11□□□□□ -0.95
HDAC7-230ENST00000552960 IGHV4-31P0DP07 118 aa9.11□□□□□ -0.95
HDAC7-230ENST00000552960 MEIG1Q5JSS6 88 aa9.11□□□□□ -0.95
HDAC7-230ENST00000552960 IGHV1OR15-1A0A075B7D0 117 aa9.1□□□□□ -0.95
HDAC7-230ENST00000552960 H3BMM0 161 aa9.1□□□□□ -0.95
HDAC7-230ENST00000552960 RPL32P62910 135 aaKnown RBP9.1□□□□□ -0.95
HDAC7-230ENST00000552960 POM121L12Q8N7R1 296 aa9.1□□□□□ -0.95
HDAC7-230ENST00000552960 UBE2WQ96B02 151 aa9.1□□□□□ -0.95
HDAC7-230ENST00000552960 NDUFA12Q9UI09 145 aa9.1□□□□□ -0.95
HDAC7-230ENST00000552960 OTOGQ6ZRI0 2925 aa9.1□□□□□ -0.95
HDAC7-230ENST00000552960 SNRPD3P62318 126 aaKnown RBP9.1□□□□□ -0.95
HDAC7-230ENST00000552960 ADAMTSL4-AS1Q5T5F5 129 aa9.1□□□□□ -0.95
HDAC7-230ENST00000552960 APRG1Q8IVJ8 170 aa9.1□□□□□ -0.95
HDAC7-230ENST00000552960 DCANP1Q8TF63 244 aa9.1□□□□□ -0.95
HDAC7-230ENST00000552960 A0A0B4J2C4 111 aa9.1□□□□□ -0.95
HDAC7-230ENST00000552960 C19orf54Q5BKX5 351 aa9.1□□□□□ -0.95
HDAC7-230ENST00000552960 CHCHD5Q9BSY4 110 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms