RNA–Protein interactions for RNA: ENST00000552696.1

NPAS3-212, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 5

Gene NPAS3, Length 340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-212ENST00000552696 WDR90Q96KV7 1748 aa1.33□□□□□ -2.2
NPAS3-212ENST00000552696 TOGARAM1Q9Y4F4 1720 aa1.33□□□□□ -2.2
NPAS3-212ENST00000552696 TMSB15BA0A087X1C1 80 aa1.33□□□□□ -2.2
NPAS3-212ENST00000552696 IGHV3-73A0A0B4J1V6 119 aa1.33□□□□□ -2.2
NPAS3-212ENST00000552696 TRAV13-2A0A0B4J235 113 aa1.33□□□□□ -2.2
NPAS3-212ENST00000552696 A0A0D9SEW6 157 aa1.33□□□□□ -2.2
NPAS3-212ENST00000552696 A0A1W2PQD3 144 aa1.33□□□□□ -2.2
NPAS3-212ENST00000552696 C17orf51A8MQB3 221 aa1.33□□□□□ -2.2
NPAS3-212ENST00000552696 IBA57-AS1B1ANH7 110 aa1.33□□□□□ -2.2
NPAS3-212ENST00000552696 BUB1B-PAK6H3BSN5 160 aa1.33□□□□□ -2.2
NPAS3-212ENST00000552696 C19orf84I3L1E1 186 aa1.33□□□□□ -2.2
NPAS3-212ENST00000552696 LECT2O14960 151 aa1.33□□□□□ -2.2
NPAS3-212ENST00000552696 PIRTP0C851 137 aa1.33□□□□□ -2.2
NPAS3-212ENST00000552696 HRES1P13985 223 aa1.33□□□□□ -2.2
NPAS3-212ENST00000552696 FCER1GP30273 86 aa1.33□□□□□ -2.2
NPAS3-212ENST00000552696 IFI27P40305 119 aaPredicted RBP1.33□□□□□ -2.2
NPAS3-212ENST00000552696 EFNA4P52798 201 aa1.33□□□□□ -2.2
NPAS3-212ENST00000552696 LINC00313P59037 77 aa1.33□□□□□ -2.2
NPAS3-212ENST00000552696 TSPEAR-AS2P59090 65 aa1.33□□□□□ -2.2
NPAS3-212ENST00000552696 DYNLT1P63172 113 aa1.33□□□□□ -2.2
NPAS3-212ENST00000552696 PLGLAQ15195 96 aa1.33□□□□□ -2.2
NPAS3-212ENST00000552696 SS18Q15532 418 aa1.33□□□□□ -2.2
NPAS3-212ENST00000552696 Q1T7F1 81 aa1.33□□□□□ -2.2
NPAS3-212ENST00000552696 ESRGQ1W209 222 aa1.33□□□□□ -2.2
NPAS3-212ENST00000552696 ASB16-AS1Q495Z4 193 aa1.33□□□□□ -2.2
NPAS3-212ENST00000552696 LINC01554Q52M75 96 aa1.33□□□□□ -2.2
NPAS3-212ENST00000552696 C2orf82Q6UX34 121 aa1.33□□□□□ -2.2
NPAS3-212ENST00000552696 FP248Q71RG6 208 aaPredicted RBP1.33□□□□□ -2.2
NPAS3-212ENST00000552696 ZFAND2AQ8N6M9 145 aa1.33□□□□□ -2.2
NPAS3-212ENST00000552696 DAND5Q8N907 189 aa1.33□□□□□ -2.2
NPAS3-212ENST00000552696 CLEC2BQ92478 149 aa1.33□□□□□ -2.2
NPAS3-212ENST00000552696 DIRC1Q969H9 104 aa1.33□□□□□ -2.2
NPAS3-212ENST00000552696 Q96M85 177 aa1.33□□□□□ -2.2
NPAS3-212ENST00000552696 TP73-AS1Q9UF72 201 aa1.33□□□□□ -2.2
NPAS3-212ENST00000552696 TRPM6Q9BX84 2022 aa1.33□□□□□ -2.2
NPAS3-212ENST00000552696 ARFGEF1Q9Y6D6 1849 aa1.33□□□□□ -2.2
NPAS3-212ENST00000552696 NLRC5Q86WI3 1866 aa1.33□□□□□ -2.2
NPAS3-212ENST00000552696 ANAPC1Q9H1A4 1944 aa1.32□□□□□ -2.2
NPAS3-212ENST00000552696 ROBO1Q9Y6N7 1651 aa1.32□□□□□ -2.2
NPAS3-212ENST00000552696 LY75O60449 1722 aa1.32□□□□□ -2.2
NPAS3-212ENST00000552696 SCN3AQ9NY46 2000 aa1.32□□□□□ -2.2
NPAS3-212ENST00000552696 STRCP1A6NGW2 1772 aa1.32□□□□□ -2.2
NPAS3-212ENST00000552696 TRBV25-1A0A075B6N4 114 aa1.32□□□□□ -2.2
NPAS3-212ENST00000552696 TRAV7A0A075B6U4 112 aa1.32□□□□□ -2.2
NPAS3-212ENST00000552696 IGKV1D-43A0A0B4J1Z2 117 aa1.32□□□□□ -2.2
NPAS3-212ENST00000552696 IGKV1-9A0A0C4DH69 117 aa1.32□□□□□ -2.2
NPAS3-212ENST00000552696 LINC01549A6NIU2 74 aa1.32□□□□□ -2.2
NPAS3-212ENST00000552696 IQCF6A8MYZ5 107 aa1.32□□□□□ -2.2
NPAS3-212ENST00000552696 HMGN2P05204 90 aaKnown RBP1.32□□□□□ -2.2
NPAS3-212ENST00000552696 CTSGP08311 255 aa1.32□□□□□ -2.2
NPAS3-212ENST00000552696 CCL4P13236 92 aa1.32□□□□□ -2.2
NPAS3-212ENST00000552696 ZNF22P17026 224 aaPredicted RBP1.32□□□□□ -2.2
NPAS3-212ENST00000552696 RNASE4P34096 147 aaKnown RBP1.32□□□□□ -2.2
NPAS3-212ENST00000552696 XCL1P47992 114 aa1.32□□□□□ -2.2
NPAS3-212ENST00000552696 FXYD7P58549 80 aa1.32□□□□□ -2.2
NPAS3-212ENST00000552696 KLKP1Q107X0 134 aa1.32□□□□□ -2.2
NPAS3-212ENST00000552696 Q6JHZ5 121 aa1.32□□□□□ -2.2
NPAS3-212ENST00000552696 SDIM1Q6ZPB5 146 aa1.32□□□□□ -2.2
NPAS3-212ENST00000552696 ZNF826PQ6ZT77 177 aa1.32□□□□□ -2.2
NPAS3-212ENST00000552696 MIR17HGQ75NE6 70 aa1.32□□□□□ -2.2
NPAS3-212ENST00000552696 NDUFA11Q86Y39 141 aa1.32□□□□□ -2.2
NPAS3-212ENST00000552696 GPHB5Q86YW7 130 aa1.32□□□□□ -2.2
NPAS3-212ENST00000552696 Q8N2B8 174 aa1.32□□□□□ -2.2
NPAS3-212ENST00000552696 WFDC5Q8TCV5 224 aa1.32□□□□□ -2.2
NPAS3-212ENST00000552696 SCGB3A1Q96QR1 104 aa1.32□□□□□ -2.2
NPAS3-212ENST00000552696 CYP4F30PQ9H0H9 118 aa1.32□□□□□ -2.2
NPAS3-212ENST00000552696 XAGE1AQ9HD64 81 aa1.32□□□□□ -2.2
NPAS3-212ENST00000552696 PRO1854Q9UHT4 67 aa1.32□□□□□ -2.2
NPAS3-212ENST00000552696 PLXNA1Q9UIW2 1896 aa1.32□□□□□ -2.2
NPAS3-212ENST00000552696 MYO9BQ13459 2157 aa1.32□□□□□ -2.2
NPAS3-212ENST00000552696 NHSL1Q5SYE7 1610 aa1.32□□□□□ -2.2
NPAS3-212ENST00000552696 NRXN3Q9Y4C0 1643 aa1.32□□□□□ -2.2
NPAS3-212ENST00000552696 PTPRDP23468 1912 aa1.32□□□□□ -2.2
NPAS3-212ENST00000552696 PTPRBP23467 1997 aa1.32□□□□□ -2.2
NPAS3-212ENST00000552696 EML6Q6ZMW3 1958 aa1.32□□□□□ -2.2
NPAS3-212ENST00000552696 LMO7Q8WWI1 1683 aa1.32□□□□□ -2.2
NPAS3-212ENST00000552696 A0A0G2JMZ2 1700 aa1.32□□□□□ -2.2
NPAS3-212ENST00000552696 LRRC37A2A6NM11 1700 aa1.32□□□□□ -2.2
NPAS3-212ENST00000552696 LRRC37AA6NMS7 1700 aa1.32□□□□□ -2.2
NPAS3-212ENST00000552696 DLEC1Q9Y238 1755 aa1.31□□□□□ -2.2
NPAS3-212ENST00000552696 KIAA1671Q9BY89 1806 aa1.31□□□□□ -2.2
NPAS3-212ENST00000552696 RALGAPA2Q2PPJ7 1873 aa1.31□□□□□ -2.2
NPAS3-212ENST00000552696 CPAMD8Q8IZJ3 1885 aa1.31□□□□□ -2.2
NPAS3-212ENST00000552696 LRRC37A3O60309 1634 aa1.31□□□□□ -2.2
NPAS3-212ENST00000552696 IGKV1D-37A0A075B6S9 117 aa1.31□□□□□ -2.2
NPAS3-212ENST00000552696 TRBV7-1A0A0A6YYK4 115 aa1.31□□□□□ -2.2
NPAS3-212ENST00000552696 TRBV10-3A0A0K0K1G6 114 aa1.31□□□□□ -2.2
NPAS3-212ENST00000552696 TEX49A0A1B0GTD5 131 aa1.31□□□□□ -2.2
NPAS3-212ENST00000552696 A0A1W2PNN7 141 aa1.31□□□□□ -2.2
NPAS3-212ENST00000552696 SMIM27A0A1W2PRY6 76 aa1.31□□□□□ -2.2
NPAS3-212ENST00000552696 C19orf71A6NCJ1 209 aa1.31□□□□□ -2.2
NPAS3-212ENST00000552696 ZNF815PA8K554 130 aa1.31□□□□□ -2.2
NPAS3-212ENST00000552696 E7EQL1 145 aa1.31□□□□□ -2.2
NPAS3-212ENST00000552696 H7BZZ5 65 aa1.31□□□□□ -2.2
NPAS3-212ENST00000552696 J3QRE1 110 aa1.31□□□□□ -2.2
NPAS3-212ENST00000552696 LY6HO94772 140 aa1.31□□□□□ -2.2
NPAS3-212ENST00000552696 DNAL4O96015 105 aa1.31□□□□□ -2.2
NPAS3-212ENST00000552696 IFI6P09912 130 aa1.31□□□□□ -2.2
NPAS3-212ENST00000552696 PLNP26678 52 aa1.31□□□□□ -2.2
NPAS3-212ENST00000552696 RPL27AP46776 148 aaKnown RBP1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms