RNA–Protein interactions for RNA: ENST00000552610.1

RAB3IP-217, Transcript of RAB3A interacting protein, humanhuman

TSL 2

Gene RAB3IP, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-217ENST00000552610 PLXNA2O75051 1894 aa1.45□□□□□ -2.18
RAB3IP-217ENST00000552610 SPEGQ15772 3267 aa1.45□□□□□ -2.18
RAB3IP-217ENST00000552610 ZFHX4Q86UP3 3567 aa1.44□□□□□ -2.18
RAB3IP-217ENST00000552610 JMJD1CQ15652 2540 aa1.44□□□□□ -2.18
RAB3IP-217ENST00000552610 CXorf51AA0A1B0GTR3 108 aa1.44□□□□□ -2.18
RAB3IP-217ENST00000552610 LOC107986453A0A1B0GWG9 222 aa1.44□□□□□ -2.18
RAB3IP-217ENST00000552610 SDC4P31431 198 aa1.44□□□□□ -2.18
RAB3IP-217ENST00000552610 RPL22P35268 128 aaKnown RBP1.44□□□□□ -2.18
RAB3IP-217ENST00000552610 DEFB109BQ30KR1 87 aa1.44□□□□□ -2.18
RAB3IP-217ENST00000552610 OR5A2Q8NGI9 324 aa1.44□□□□□ -2.18
RAB3IP-217ENST00000552610 NAT14Q8WUY8 206 aa1.44□□□□□ -2.18
RAB3IP-217ENST00000552610 WDFY3Q8IZQ1 3526 aa1.44□□□□□ -2.18
RAB3IP-217ENST00000552610 LOC400499M0QZD8 3231 aa1.44□□□□□ -2.18
RAB3IP-217ENST00000552610 COL12A1Q99715 3063 aa1.44□□□□□ -2.18
RAB3IP-217ENST00000552610 ROS1P08922 2347 aa1.44□□□□□ -2.18
RAB3IP-217ENST00000552610 MUC22E2RYF6 1773 aaPredicted RBP1.44□□□□□ -2.18
RAB3IP-217ENST00000552610 ACANP16112 2415 aa1.44□□□□□ -2.18
RAB3IP-217ENST00000552610 SONP18583 2426 aaKnown RBP1.44□□□□□ -2.18
RAB3IP-217ENST00000552610 ATMQ13315 3056 aa1.43□□□□□ -2.18
RAB3IP-217ENST00000552610 ANKHD1Q8IWZ3 2542 aaKnown RBP1.43□□□□□ -2.18
RAB3IP-217ENST00000552610 TENM4Q6N022 2769 aa1.43□□□□□ -2.18
RAB3IP-217ENST00000552610 CSPG4Q6UVK1 2322 aa1.43□□□□□ -2.18
RAB3IP-217ENST00000552610 ANKRD36A6QL64 1941 aa1.43□□□□□ -2.18
RAB3IP-217ENST00000552610 A0A1B0GX51 115 aa1.43□□□□□ -2.18
RAB3IP-217ENST00000552610 NCR3O14931 201 aa1.43□□□□□ -2.18
RAB3IP-217ENST00000552610 PPYP01298 95 aa1.43□□□□□ -2.18
RAB3IP-217ENST00000552610 CCL4P13236 92 aa1.43□□□□□ -2.18
RAB3IP-217ENST00000552610 CRYGSP22914 178 aa1.43□□□□□ -2.18
RAB3IP-217ENST00000552610 CASC2Q6XLA1 102 aa1.43□□□□□ -2.18
RAB3IP-217ENST00000552610 CLEC2BQ92478 149 aa1.43□□□□□ -2.18
RAB3IP-217ENST00000552610 AIF1LQ9BQI0 150 aa1.43□□□□□ -2.18
RAB3IP-217ENST00000552610 U3KQA8 63 aa1.43□□□□□ -2.18
RAB3IP-217ENST00000552610 CACNA1CQ13936 2221 aa1.43□□□□□ -2.18
RAB3IP-217ENST00000552610 TLN2Q9Y4G6 2542 aa1.42□□□□□ -2.18
RAB3IP-217ENST00000552610 ANKRD17O75179 2603 aaKnown RBP1.42□□□□□ -2.18
RAB3IP-217ENST00000552610 BOD1L1Q8NFC6 3051 aa1.42□□□□□ -2.18
RAB3IP-217ENST00000552610 SNRNP200O75643 2136 aaKnown RBP1.42□□□□□ -2.18
RAB3IP-217ENST00000552610 C10orf142B7Z368 130 aa1.42□□□□□ -2.18
RAB3IP-217ENST00000552610 UQCRHP07919 91 aa1.42□□□□□ -2.18
RAB3IP-217ENST00000552610 SCGB1A1P11684 91 aa1.42□□□□□ -2.18
RAB3IP-217ENST00000552610 FOXA3P55318 350 aaPredicted RBP1.42□□□□□ -2.18
RAB3IP-217ENST00000552610 SPATA45Q537H7 98 aa1.42□□□□□ -2.18
RAB3IP-217ENST00000552610 OR8I2Q8N0Y5 310 aa1.42□□□□□ -2.18
RAB3IP-217ENST00000552610 CIB3Q96Q77 187 aaPredicted RBP1.42□□□□□ -2.18
RAB3IP-217ENST00000552610 NIT2Q9NQR4 276 aa1.42□□□□□ -2.18
RAB3IP-217ENST00000552610 TRAV36DV7A0A075B6V5 113 aa1.41□□□□□ -2.18
RAB3IP-217ENST00000552610 BORCS7-ASMTA0A0B4J1R7 106 aa1.41□□□□□ -2.18
RAB3IP-217ENST00000552610 C3orf85A0A1B0GTC6 90 aa1.41□□□□□ -2.18
RAB3IP-217ENST00000552610 DEGS1O15121 323 aa1.41□□□□□ -2.18
RAB3IP-217ENST00000552610 DPM2O94777 84 aa1.41□□□□□ -2.18
RAB3IP-217ENST00000552610 COX6B1P14854 86 aa1.41□□□□□ -2.18
RAB3IP-217ENST00000552610 CCSMST1Q4G0I0 132 aa1.41□□□□□ -2.18
RAB3IP-217ENST00000552610 BRK1Q8WUW1 75 aa1.41□□□□□ -2.18
RAB3IP-217ENST00000552610 WFDC10AQ9H1F0 79 aa1.41□□□□□ -2.18
RAB3IP-217ENST00000552610 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.41□□□□□ -2.18
RAB3IP-217ENST00000552610 MAP1AP78559 2803 aaPredicted RBP1.41□□□□□ -2.18
RAB3IP-217ENST00000552610 UTP20O75691 2785 aaKnown RBP1.41□□□□□ -2.18
RAB3IP-217ENST00000552610 CADP27708 2225 aa1.4□□□□□ -2.18
RAB3IP-217ENST00000552610 NINQ8N4C6 2090 aa1.4□□□□□ -2.19
RAB3IP-217ENST00000552610 A0A0J9YY99 117 aa1.4□□□□□ -2.19
RAB3IP-217ENST00000552610 UQCRQO14949 82 aa1.4□□□□□ -2.19
RAB3IP-217ENST00000552610 SPINT3P49223 89 aa1.4□□□□□ -2.19
RAB3IP-217ENST00000552610 DCDP81605 110 aaKnown RBP1.4□□□□□ -2.19
RAB3IP-217ENST00000552610 OR8B8Q15620 311 aa1.4□□□□□ -2.19
RAB3IP-217ENST00000552610 ZCCHC23Q6ZST2 131 aa1.4□□□□□ -2.19
RAB3IP-217ENST00000552610 FDCSPQ8NFU4 85 aa1.4□□□□□ -2.19
RAB3IP-217ENST00000552610 OR51A4Q8NGJ6 313 aa1.4□□□□□ -2.19
RAB3IP-217ENST00000552610 LCN9Q8WX39 176 aa1.4□□□□□ -2.19
RAB3IP-217ENST00000552610 NABP2Q9BQ15 211 aa1.4□□□□□ -2.19
RAB3IP-217ENST00000552610 MPC1Q9Y5U8 109 aa1.4□□□□□ -2.19
RAB3IP-217ENST00000552610 ZFHX3Q15911 3703 aa1.4□□□□□ -2.19
RAB3IP-217ENST00000552610 CRYBG3Q68DQ2 2970 aa1.4□□□□□ -2.19
RAB3IP-217ENST00000552610 COL6A5A8TX70 2615 aa1.39□□□□□ -2.19
RAB3IP-217ENST00000552610 RELNP78509 3460 aa1.39□□□□□ -2.19
RAB3IP-217ENST00000552610 CELSR2Q9HCU4 2923 aa1.39□□□□□ -2.19
RAB3IP-217ENST00000552610 NIPBLQ6KC79 2804 aaeCLIP1.39□□□□□ -2.19
RAB3IP-217ENST00000552610 NBPF19A0A087WUL8 3843 aa1.39□□□□□ -2.19
RAB3IP-217ENST00000552610 TRAV17A0A0B4J275 112 aa1.39□□□□□ -2.19
RAB3IP-217ENST00000552610 M0QZK8 103 aa1.39□□□□□ -2.19
RAB3IP-217ENST00000552610 HBDP02042 147 aa1.39□□□□□ -2.19
RAB3IP-217ENST00000552610 SCTP09683 121 aa1.39□□□□□ -2.19
RAB3IP-217ENST00000552610 ETV6P41212 452 aa1.39□□□□□ -2.19
RAB3IP-217ENST00000552610 DNAJB13P59910 316 aa1.39□□□□□ -2.19
RAB3IP-217ENST00000552610 CCDC153Q494R4 210 aa1.39□□□□□ -2.19
RAB3IP-217ENST00000552610 IZUMO2Q6UXV1 221 aa1.39□□□□□ -2.19
RAB3IP-217ENST00000552610 Q6ZS92 163 aa1.39□□□□□ -2.19
RAB3IP-217ENST00000552610 COX14Q96I36 57 aa1.39□□□□□ -2.19
RAB3IP-217ENST00000552610 AP1S3Q96PC3 154 aa1.39□□□□□ -2.19
RAB3IP-217ENST00000552610 SNRNP25Q9BV90 132 aaKnown RBP1.39□□□□□ -2.19
RAB3IP-217ENST00000552610 BATF3Q9NR55 127 aa1.39□□□□□ -2.19
RAB3IP-217ENST00000552610 ABCA1O95477 2261 aa1.39□□□□□ -2.19
RAB3IP-217ENST00000552610 HIVEP1P15822 2718 aa1.39□□□□□ -2.19
RAB3IP-217ENST00000552610 ATRQ13535 2644 aa1.39□□□□□ -2.19
RAB3IP-217ENST00000552610 LRBAP50851 2863 aa1.39□□□□□ -2.19
RAB3IP-217ENST00000552610 NBEAL1Q6ZS30 2694 aa1.39□□□□□ -2.19
RAB3IP-217ENST00000552610 USF3Q68DE3 2245 aa1.39□□□□□ -2.19
RAB3IP-217ENST00000552610 APCP25054 2843 aa1.39□□□□□ -2.19
RAB3IP-217ENST00000552610 IFITM5A6NNB3 132 aa1.38□□□□□ -2.19
RAB3IP-217ENST00000552610 DBIP07108 87 aaKnown RBP1.38□□□□□ -2.19
RAB3IP-217ENST00000552610 PIRTP0C851 137 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms