RNA–Protein interactions for RNA: ENST00000552433.1

LETMD1-233, Transcript of LETM1 domain containing 1, human

TSL 2

Gene LETMD1, Length 727 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LETMD1-233	ENST00000552433	C2orf70	A6NJV1	201 aa		4.28	□□□□□ -1.72
LETMD1-233	ENST00000552433	CPSF4	O95639	269 aa	Known RBP	4.28	□□□□□ -1.72
LETMD1-233	ENST00000552433	IL4	P05112	153 aa		4.28	□□□□□ -1.72
LETMD1-233	ENST00000552433	XCL1	P47992	114 aa		4.28	□□□□□ -1.72
LETMD1-233	ENST00000552433	RNASE13	Q5GAN3	156 aa	Known RBP	4.28	□□□□□ -1.72
LETMD1-233	ENST00000552433	S100A7L2	Q5SY68	101 aa		4.28	□□□□□ -1.72
LETMD1-233	ENST00000552433	VMO1	Q7Z5L0	202 aa		4.28	□□□□□ -1.72
LETMD1-233	ENST00000552433	SMCR5	Q8TEV8	140 aa		4.28	□□□□□ -1.72
LETMD1-233	ENST00000552433	SMIM4	Q8WVI0	70 aa		4.28	□□□□□ -1.72
LETMD1-233	ENST00000552433	ZNF414	Q96IQ9	312 aa		4.28	□□□□□ -1.72
LETMD1-233	ENST00000552433	NMES1	Q9C002	83 aa		4.28	□□□□□ -1.72
LETMD1-233	ENST00000552433	GABARAPL1	Q9H0R8	117 aa		4.28	□□□□□ -1.72
LETMD1-233	ENST00000552433	DHRS4-AS1	Q9P1J3	65 aa		4.28	□□□□□ -1.72
LETMD1-233	ENST00000552433	DEC1	Q9P2X7	70 aa		4.28	□□□□□ -1.72
LETMD1-233	ENST00000552433	NDUFA12	Q9UI09	145 aa		4.28	□□□□□ -1.72
LETMD1-233	ENST00000552433	COL6A6	A6NMZ7	2263 aa		4.28	□□□□□ -1.72
LETMD1-233	ENST00000552433	LAMA4	Q16363	1823 aa		4.28	□□□□□ -1.72
LETMD1-233	ENST00000552433	DMXL2	Q8TDJ6	3036 aa		4.27	□□□□□ -1.73
LETMD1-233	ENST00000552433	C2CD3	Q4AC94	2353 aa		4.27	□□□□□ -1.73
LETMD1-233	ENST00000552433	TENM4	Q6N022	2769 aa		4.27	□□□□□ -1.73
LETMD1-233	ENST00000552433	PLXNB3	Q9ULL4	1909 aa		4.27	□□□□□ -1.73
LETMD1-233	ENST00000552433	IGLV3-12	A0A075B6K2	115 aa		4.27	□□□□□ -1.73
LETMD1-233	ENST00000552433	hDV103S1	A0JD37	113 aa		4.27	□□□□□ -1.73
LETMD1-233	ENST00000552433		A6NIN4	97 aa		4.27	□□□□□ -1.73
LETMD1-233	ENST00000552433		H7C423	109 aa		4.27	□□□□□ -1.73
LETMD1-233	ENST00000552433	CGB3	P0DN86	165 aa		4.27	□□□□□ -1.73
LETMD1-233	ENST00000552433	CGB7	P0DN87	165 aa		4.27	□□□□□ -1.73
LETMD1-233	ENST00000552433	UBE2D3	P61077	147 aa		4.27	□□□□□ -1.73
LETMD1-233	ENST00000552433	UBE2D2	P62837	147 aa		4.27	□□□□□ -1.73
LETMD1-233	ENST00000552433	SYCN	Q0VAF6	134 aa		4.27	□□□□□ -1.73
LETMD1-233	ENST00000552433	LUZP6	Q538Z0	58 aa		4.27	□□□□□ -1.73
LETMD1-233	ENST00000552433	IFI27L1	Q96BM0	104 aa		4.27	□□□□□ -1.73
LETMD1-233	ENST00000552433	C1orf147	Q96MC9	270 aa	Predicted RBP	4.27	□□□□□ -1.73
LETMD1-233	ENST00000552433	ANKRD17	O75179	2603 aa	Known RBP	4.27	□□□□□ -1.73
LETMD1-233	ENST00000552433	TSC2	P49815	1807 aa		4.27	□□□□□ -1.73
LETMD1-233	ENST00000552433	PIEZO2	Q9H5I5	2752 aa		4.27	□□□□□ -1.73
LETMD1-233	ENST00000552433	PCNX2	A6NKB5	2137 aa		4.27	□□□□□ -1.73
LETMD1-233	ENST00000552433	WDFY3	Q8IZQ1	3526 aa		4.26	□□□□□ -1.73
LETMD1-233	ENST00000552433	ASCC3	Q8N3C0	2202 aa	Known RBP	4.26	□□□□□ -1.73
LETMD1-233	ENST00000552433	ABCA12	Q86UK0	2595 aa		4.26	□□□□□ -1.73
LETMD1-233	ENST00000552433		A0A1B0GWA3	101 aa		4.26	□□□□□ -1.73
LETMD1-233	ENST00000552433	PINLYP	A6NC86	204 aa		4.26	□□□□□ -1.73
LETMD1-233	ENST00000552433		H3BMM0	161 aa		4.26	□□□□□ -1.73
LETMD1-233	ENST00000552433	BPY2	O14599	106 aa		4.26	□□□□□ -1.73
LETMD1-233	ENST00000552433	ZNF117	Q03924	483 aa		4.26	□□□□□ -1.73
LETMD1-233	ENST00000552433	DYNAP	Q8N1N2	210 aa		4.26	□□□□□ -1.73
LETMD1-233	ENST00000552433	UBE2W	Q96B02	151 aa		4.26	□□□□□ -1.73
LETMD1-233	ENST00000552433	FAM103A1	Q9BTL3	118 aa	Known RBP	4.26	□□□□□ -1.73
LETMD1-233	ENST00000552433	HILPDA	Q9Y5L2	63 aa		4.26	□□□□□ -1.73
LETMD1-233	ENST00000552433	F5	P12259	2224 aa		4.26	□□□□□ -1.73
LETMD1-233	ENST00000552433	CACNA1E	Q15878	2313 aa		4.26	□□□□□ -1.73
LETMD1-233	ENST00000552433	URB1	O60287	2271 aa	Known RBP	4.25	□□□□□ -1.73
LETMD1-233	ENST00000552433		A0A0B4J2C4	111 aa		4.25	□□□□□ -1.73
LETMD1-233	ENST00000552433	IGHV5-10-1	A0A0J9YXX1	117 aa		4.25	□□□□□ -1.73
LETMD1-233	ENST00000552433	MYMX	A0A1B0GTQ4	84 aa		4.25	□□□□□ -1.73
LETMD1-233	ENST00000552433	SLC25A20	O43772	301 aa		4.25	□□□□□ -1.73
LETMD1-233	ENST00000552433	IGHV1-8	P0DP01	117 aa		4.25	□□□□□ -1.73
LETMD1-233	ENST00000552433	CMC4	P56277	68 aa	Predicted RBP	4.25	□□□□□ -1.73
LETMD1-233	ENST00000552433	SSBP1	Q04837	148 aa	Known RBP	4.25	□□□□□ -1.73
LETMD1-233	ENST00000552433	C2orf83	Q53S99	150 aa		4.25	□□□□□ -1.73
LETMD1-233	ENST00000552433	PPP1R1C	Q8WVI7	109 aa		4.25	□□□□□ -1.73
LETMD1-233	ENST00000552433	PI4KA	P42356	2102 aa		4.25	□□□□□ -1.73
LETMD1-233	ENST00000552433	EML5	Q05BV3	1969 aa		4.25	□□□□□ -1.73
LETMD1-233	ENST00000552433	CREBBP	Q92793	2442 aa		4.24	□□□□□ -1.73
LETMD1-233	ENST00000552433	TRBV7-3	A0A075B6L6	115 aa		4.24	□□□□□ -1.73
LETMD1-233	ENST00000552433	TRBV7-1	A0A0A6YYK4	115 aa		4.24	□□□□□ -1.73
LETMD1-233	ENST00000552433	IGHV5-51	A0A0C4DH38	117 aa		4.24	□□□□□ -1.73
LETMD1-233	ENST00000552433	TRBV10-3	A0A0K0K1G6	114 aa		4.24	□□□□□ -1.73
LETMD1-233	ENST00000552433	HMGN2	P05204	90 aa	Known RBP	4.24	□□□□□ -1.73
LETMD1-233	ENST00000552433	SUPT4H1	P63272	117 aa	Known RBP	4.24	□□□□□ -1.73
LETMD1-233	ENST00000552433	ZNF826P	Q6ZT77	177 aa		4.24	□□□□□ -1.73
LETMD1-233	ENST00000552433	FAM167A-AS1	Q96KT0	104 aa		4.24	□□□□□ -1.73
LETMD1-233	ENST00000552433	AGRN	O00468	2067 aa		4.24	□□□□□ -1.73
LETMD1-233	ENST00000552433	ARID1A	O14497	2285 aa		4.24	□□□□□ -1.73
LETMD1-233	ENST00000552433	KIAA2026	Q5HYC2	2103 aa		4.24	□□□□□ -1.73
LETMD1-233	ENST00000552433	C19orf71	A6NCJ1	209 aa		4.23	□□□□□ -1.73
LETMD1-233	ENST00000552433	SH2D1A	O60880	128 aa		4.23	□□□□□ -1.73
LETMD1-233	ENST00000552433	LY6H	O94772	140 aa		4.23	□□□□□ -1.73
LETMD1-233	ENST00000552433	IGLV1-51	P01701	117 aa		4.23	□□□□□ -1.73
LETMD1-233	ENST00000552433	IGLV3-25	P01717	112 aa		4.23	□□□□□ -1.73
LETMD1-233	ENST00000552433	MDK	P21741	143 aa	Predicted RBP	4.23	□□□□□ -1.73
LETMD1-233	ENST00000552433	C9orf116	Q5BN46	136 aa	Predicted RBP	4.23	□□□□□ -1.73
LETMD1-233	ENST00000552433		Q8N814	137 aa		4.23	□□□□□ -1.73
LETMD1-233	ENST00000552433	RPP21	Q9H633	154 aa	Known RBP	4.23	□□□□□ -1.73
LETMD1-233	ENST00000552433	GNG13	Q9P2W3	67 aa		4.23	□□□□□ -1.73
LETMD1-233	ENST00000552433	PRO1854	Q9UHT4	67 aa		4.23	□□□□□ -1.73
LETMD1-233	ENST00000552433	GOLGA4	Q13439	2230 aa	Known RBP	4.22	□□□□□ -1.73
LETMD1-233	ENST00000552433	PTPRQ	Q9UMZ3	2332 aa		4.22	□□□□□ -1.73
LETMD1-233	ENST00000552433	TEX15	Q9BXT5	2789 aa		4.22	□□□□□ -1.73
LETMD1-233	ENST00000552433	LAMA5	O15230	3695 aa		4.22	□□□□□ -1.73
LETMD1-233	ENST00000552433	TRAV7	A0A075B6U4	112 aa		4.22	□□□□□ -1.73
LETMD1-233	ENST00000552433	LOC107984156	A0A0G2JMH3	177 aa		4.22	□□□□□ -1.73
LETMD1-233	ENST00000552433	C16orf90	A8MZG2	172 aa		4.22	□□□□□ -1.73
LETMD1-233	ENST00000552433	PRB1	P04280	392 aa		4.22	□□□□□ -1.73
LETMD1-233	ENST00000552433	IGHV4-34	P06331	123 aa		4.22	□□□□□ -1.73
LETMD1-233	ENST00000552433	CD24	P25063	80 aa		4.22	□□□□□ -1.73
LETMD1-233	ENST00000552433	NDUFA11	Q86Y39	141 aa		4.22	□□□□□ -1.73
LETMD1-233	ENST00000552433	ARL17A	Q8IVW1	177 aa		4.22	□□□□□ -1.73
LETMD1-233	ENST00000552433	CDC42SE1	Q9NRR8	79 aa		4.22	□□□□□ -1.73
LETMD1-233	ENST00000552433	ABRACL	Q9P1F3	81 aa		4.22	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 197.7 ms