RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 HBBP68871 147 aa11.65□□□□□ -0.54
CDK4-208ENST00000551706 COTL1Q14019 142 aa11.65□□□□□ -0.54
CDK4-208ENST00000551706 ATP5L2Q7Z4Y8 100 aa11.65□□□□□ -0.54
CDK4-208ENST00000551706 Q8N3U1 123 aa11.65□□□□□ -0.54
CDK4-208ENST00000551706 PPP1R17O96001 155 aa11.64□□□□□ -0.55
CDK4-208ENST00000551706 MRPL54Q6P161 138 aaKnown RBP11.64□□□□□ -0.55
CDK4-208ENST00000551706 APOBP04114 4563 aaKnown RBP11.64□□□□□ -0.55
CDK4-208ENST00000551706 LRP1BQ9NZR2 4599 aa11.64□□□□□ -0.55
CDK4-208ENST00000551706 A0A1B0GXF2 115 aa11.63□□□□□ -0.55
CDK4-208ENST00000551706 SDHAF1A6NFY7 115 aa11.63□□□□□ -0.55
CDK4-208ENST00000551706 FAM104BQ5XKR9 115 aa11.63□□□□□ -0.55
CDK4-208ENST00000551706 TMEM243Q9BU79 118 aa11.63□□□□□ -0.55
CDK4-208ENST00000551706 TM2D2Q9BX73 214 aa11.63□□□□□ -0.55
CDK4-208ENST00000551706 Q9HAA7 133 aa11.63□□□□□ -0.55
CDK4-208ENST00000551706 ST20Q9HBF5 79 aa11.63□□□□□ -0.55
CDK4-208ENST00000551706 C16orf90A8MZG2 172 aa11.62□□□□□ -0.55
CDK4-208ENST00000551706 NCR2O95944 276 aa11.62□□□□□ -0.55
CDK4-208ENST00000551706 RHEBQ15382 184 aa11.62□□□□□ -0.55
CDK4-208ENST00000551706 CLRN3Q8NCR9 226 aa11.62□□□□□ -0.55
CDK4-208ENST00000551706 CTDSP1Q9GZU7 261 aa11.62□□□□□ -0.55
CDK4-208ENST00000551706 KLK12Q9UKR0 248 aa11.62□□□□□ -0.55
CDK4-208ENST00000551706 EREGO14944 169 aa11.61□□□□□ -0.55
CDK4-208ENST00000551706 PSCAO43653 123 aa11.61□□□□□ -0.55
CDK4-208ENST00000551706 AMTP48728 403 aa11.61□□□□□ -0.55
CDK4-208ENST00000551706 MPV17L2Q567V2 206 aa11.61□□□□□ -0.55
CDK4-208ENST00000551706 RMI2Q96E14 147 aa11.61□□□□□ -0.55
CDK4-208ENST00000551706 IMMP2LQ96T52 175 aa11.61□□□□□ -0.55
CDK4-208ENST00000551706 COX11Q9Y6N1 276 aa11.61□□□□□ -0.55
CDK4-208ENST00000551706 I3L3M4 83 aa11.6□□□□□ -0.55
CDK4-208ENST00000551706 PMCHP20382 165 aa11.6□□□□□ -0.55
CDK4-208ENST00000551706 Q0VG73 95 aa11.6□□□□□ -0.55
CDK4-208ENST00000551706 GAGE6Q13070 117 aa11.6□□□□□ -0.55
CDK4-208ENST00000551706 MRPL51Q4U2R6 128 aaKnown RBP11.6□□□□□ -0.55
CDK4-208ENST00000551706 ATRAIDQ6UW56 229 aa11.6□□□□□ -0.55
CDK4-208ENST00000551706 BTF3L4Q96K17 158 aa11.6□□□□□ -0.55
CDK4-208ENST00000551706 UBE2L6O14933 153 aa11.59□□□□□ -0.55
CDK4-208ENST00000551706 GAS8-AS1O95177 125 aa11.59□□□□□ -0.55
CDK4-208ENST00000551706 RPS10P46783 165 aaKnown RBP11.59□□□□□ -0.55
CDK4-208ENST00000551706 UBE2WQ96B02 151 aa11.59□□□□□ -0.55
CDK4-208ENST00000551706 TMEM70Q9BUB7 260 aa11.59□□□□□ -0.55
CDK4-208ENST00000551706 CRPP02741 224 aa11.58□□□□□ -0.56
CDK4-208ENST00000551706 APCSP02743 223 aa11.58□□□□□ -0.56
CDK4-208ENST00000551706 ANGP03950 147 aaKnown RBP11.58□□□□□ -0.56
CDK4-208ENST00000551706 CKS2P33552 79 aa11.58□□□□□ -0.56
CDK4-208ENST00000551706 RBX1P62877 108 aa11.58□□□□□ -0.56
CDK4-208ENST00000551706 RPS10P5Q9NQ39 176 aa11.58□□□□□ -0.56
CDK4-208ENST00000551706 A0A087WTM6 91 aa11.57□□□□□ -0.56
CDK4-208ENST00000551706 TRBV27A0A0K0K1C4 114 aa11.57□□□□□ -0.56
CDK4-208ENST00000551706 A0A1B0GUV1 79 aa11.57□□□□□ -0.56
CDK4-208ENST00000551706 SMKR1H3BMG3 65 aa11.57□□□□□ -0.56
CDK4-208ENST00000551706 PPBPP02775 128 aa11.57□□□□□ -0.56
CDK4-208ENST00000551706 POLR2KP53803 58 aaKnown RBP11.57□□□□□ -0.56
CDK4-208ENST00000551706 SUMO2P61956 95 aaKnown RBP11.57□□□□□ -0.56
CDK4-208ENST00000551706 NRACQ8N912 160 aa11.57□□□□□ -0.56
CDK4-208ENST00000551706 Q8N976 141 aa11.57□□□□□ -0.56
CDK4-208ENST00000551706 C7orf77A4D0Y5 90 aa11.56□□□□□ -0.56
CDK4-208ENST00000551706 H7C423 109 aa11.56□□□□□ -0.56
CDK4-208ENST00000551706 VCYO14598 125 aa11.56□□□□□ -0.56
CDK4-208ENST00000551706 DEFB104AQ8WTQ1 72 aa11.56□□□□□ -0.56
CDK4-208ENST00000551706 C20orf78Q9BR46 151 aa11.56□□□□□ -0.56
CDK4-208ENST00000551706 TMEM242Q9NWH2 141 aa11.56□□□□□ -0.56
CDK4-208ENST00000551706 DNAH5Q8TE73 4624 aa11.55□□□□□ -0.56
CDK4-208ENST00000551706 TRBV24-1A0A075B6N3 115 aa11.55□□□□□ -0.56
CDK4-208ENST00000551706 TRAV9-1A0A075B6T8 112 aa11.55□□□□□ -0.56
CDK4-208ENST00000551706 IGKV2D-24A0A075B6R9 120 aa11.54□□□□□ -0.56
CDK4-208ENST00000551706 PHOX2AO14813 284 aa11.54□□□□□ -0.56
CDK4-208ENST00000551706 S100PP25815 95 aa11.54□□□□□ -0.56
CDK4-208ENST00000551706 MIAQ16674 131 aa11.54□□□□□ -0.56
CDK4-208ENST00000551706 ENHOQ6UWT2 76 aa11.54□□□□□ -0.56
CDK4-208ENST00000551706 SPATA12Q7Z6I5 190 aa11.54□□□□□ -0.56
CDK4-208ENST00000551706 C1orf43Q9BWL3 253 aa11.54□□□□□ -0.56
CDK4-208ENST00000551706 PRR34Q9NV39 138 aa11.54□□□□□ -0.56
CDK4-208ENST00000551706 D6R8Y8 96 aa11.53□□□□□ -0.56
CDK4-208ENST00000551706 TSHBP01222 138 aa11.53□□□□□ -0.56
CDK4-208ENST00000551706 RPL32P62910 135 aaKnown RBP11.53□□□□□ -0.56
CDK4-208ENST00000551706 ORMDL3Q8N138 153 aa11.53□□□□□ -0.56
CDK4-208ENST00000551706 LINC00269Q8N2A0 174 aa11.53□□□□□ -0.56
CDK4-208ENST00000551706 KIR2DL4Q99706 377 aa11.53□□□□□ -0.56
CDK4-208ENST00000551706 PGPEP1Q9NXJ5 209 aa11.53□□□□□ -0.56
CDK4-208ENST00000551706 LRCOL1A6NCL2 159 aa11.52□□□□□ -0.57
CDK4-208ENST00000551706 TCAPO15273 167 aa11.52□□□□□ -0.57
CDK4-208ENST00000551706 TNFRSF6BO95407 300 aa11.52□□□□□ -0.57
CDK4-208ENST00000551706 FCER1GP30273 86 aa11.52□□□□□ -0.57
CDK4-208ENST00000551706 AMMECR1LQ6DCA0 310 aa11.52□□□□□ -0.57
CDK4-208ENST00000551706 C20orf203Q8NBC4 194 aa11.52□□□□□ -0.57
CDK4-208ENST00000551706 ESDP10768 282 aa11.51□□□□□ -0.57
CDK4-208ENST00000551706 ZNF25P17030 456 aaPredicted RBP11.51□□□□□ -0.57
CDK4-208ENST00000551706 CDPF1Q6NVV7 123 aa11.51□□□□□ -0.57
CDK4-208ENST00000551706 TMEM136Q6ZRR5 245 aa11.51□□□□□ -0.57
CDK4-208ENST00000551706 IGLV4-60A0A075B6I1 120 aa11.5□□□□□ -0.57
CDK4-208ENST00000551706 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.5□□□□□ -0.57
CDK4-208ENST00000551706 IGKV2-29A2NJV5 120 aaPredicted RBP11.5□□□□□ -0.57
CDK4-208ENST00000551706 KRTAP10-2P60368 255 aa11.5□□□□□ -0.57
CDK4-208ENST00000551706 REG3AQ06141 175 aa11.5□□□□□ -0.57
CDK4-208ENST00000551706 SMCO4Q9NRQ5 59 aa11.5□□□□□ -0.57
CDK4-208ENST00000551706 LAMTOR2Q9Y2Q5 125 aa11.5□□□□□ -0.57
CDK4-208ENST00000551706 TRAV8-4A0A0B4J246 113 aa11.49□□□□□ -0.57
CDK4-208ENST00000551706 NPYP01303 97 aa11.49□□□□□ -0.57
CDK4-208ENST00000551706 FGF6P10767 208 aa11.49□□□□□ -0.57
CDK4-208ENST00000551706 SMAGPQ0VAQ4 97 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms