RNA–Protein interactions for RNA: ENST00000551216.2

SCN8A-207, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 1,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-207ENST00000551216 Q6ZTI0 123 aa10.4□□□□□ -0.75
SCN8A-207ENST00000551216 DAZ4Q86SG3 579 aaKnown RBP10.4□□□□□ -0.75
SCN8A-207ENST00000551216 NFE4Q86UQ8 179 aa10.4□□□□□ -0.75
SCN8A-207ENST00000551216 DAZ3Q9NR90 486 aaKnown RBP10.4□□□□□ -0.75
SCN8A-207ENST00000551216 IGLV4-69A0A075B6H9 119 aa10.39□□□□□ -0.75
SCN8A-207ENST00000551216 C11orf86A6NJI1 115 aa10.39□□□□□ -0.75
SCN8A-207ENST00000551216 K7EQD1 137 aa10.39□□□□□ -0.75
SCN8A-207ENST00000551216 RPL36AP83881 106 aaKnown RBP10.39□□□□□ -0.75
SCN8A-207ENST00000551216 OR11H2Q8NH07 326 aa10.39□□□□□ -0.75
SCN8A-207ENST00000551216 RPL36ALQ969Q0 106 aaKnown RBP10.39□□□□□ -0.75
SCN8A-207ENST00000551216 TIMM21Q9BVV7 248 aa10.39□□□□□ -0.75
SCN8A-207ENST00000551216 VCX2Q9H322 139 aa10.39□□□□□ -0.75
SCN8A-207ENST00000551216 NOP10Q9NPE3 64 aaKnown RBP10.39□□□□□ -0.75
SCN8A-207ENST00000551216 SMAGPQ0VAQ4 97 aa10.38□□□□□ -0.75
SCN8A-207ENST00000551216 TRBV6-4A0A1B0GX49 114 aa10.37□□□□□ -0.75
SCN8A-207ENST00000551216 TAL2Q16559 108 aa10.37□□□□□ -0.75
SCN8A-207ENST00000551216 ZNF479Q96JC4 524 aa10.37□□□□□ -0.75
SCN8A-207ENST00000551216 AMELXQ99217 191 aa10.37□□□□□ -0.75
SCN8A-207ENST00000551216 CHCHD7Q9BUK0 85 aa10.37□□□□□ -0.75
SCN8A-207ENST00000551216 TP73-AS1Q9UF72 201 aa10.37□□□□□ -0.75
SCN8A-207ENST00000551216 IGLV4-3A0A075B6K6 122 aa10.36□□□□□ -0.75
SCN8A-207ENST00000551216 APOC4P55056 127 aa10.36□□□□□ -0.75
SCN8A-207ENST00000551216 TRBV25-1A0A075B6N4 114 aa10.36□□□□□ -0.75
SCN8A-207ENST00000551216 TRGV2A0A075B6R0 118 aa10.36□□□□□ -0.75
SCN8A-207ENST00000551216 A6NDN8 102 aa10.36□□□□□ -0.75
SCN8A-207ENST00000551216 MRPS36P82909 103 aaKnown RBP10.36□□□□□ -0.75
SCN8A-207ENST00000551216 GAGE1Q13065 139 aa10.36□□□□□ -0.75
SCN8A-207ENST00000551216 LINC00612Q8N6U2 182 aa10.36□□□□□ -0.75
SCN8A-207ENST00000551216 ORAOV1Q8WV07 137 aa10.36□□□□□ -0.75
SCN8A-207ENST00000551216 GTSF1LQ9H1H1 148 aa10.35□□□□□ -0.75
SCN8A-207ENST00000551216 UBE2D4Q9Y2X8 147 aa10.35□□□□□ -0.75
SCN8A-207ENST00000551216 CSDC2Q9Y534 153 aaKnown RBP10.35□□□□□ -0.75
SCN8A-207ENST00000551216 TRAV8-6A0A0B4J262 113 aa10.34□□□□□ -0.75
SCN8A-207ENST00000551216 MYMXA0A1B0GTQ4 84 aa10.34□□□□□ -0.75
SCN8A-207ENST00000551216 UBE2D3P61077 147 aa10.34□□□□□ -0.75
SCN8A-207ENST00000551216 UBE2D2P62837 147 aa10.34□□□□□ -0.75
SCN8A-207ENST00000551216 SLC25A29Q8N8R3 303 aa10.34□□□□□ -0.75
SCN8A-207ENST00000551216 ZNRF2Q8NHG8 242 aa10.34□□□□□ -0.75
SCN8A-207ENST00000551216 PRADC1Q9BSG0 188 aa10.34□□□□□ -0.75
SCN8A-207ENST00000551216 CHAC1Q9BUX1 264 aa10.33□□□□□ -0.76
SCN8A-207ENST00000551216 COX11Q9Y6N1 276 aa10.33□□□□□ -0.76
SCN8A-207ENST00000551216 JMJD1CQ15652 2540 aa10.33□□□□□ -0.76
SCN8A-207ENST00000551216 GAGE12BA1L429 117 aa10.33□□□□□ -0.76
SCN8A-207ENST00000551216 H7C423 109 aa10.33□□□□□ -0.76
SCN8A-207ENST00000551216 GAGE7O76087 117 aa10.33□□□□□ -0.76
SCN8A-207ENST00000551216 GAGE12FP0CL80 117 aa10.33□□□□□ -0.76
SCN8A-207ENST00000551216 GAGE12GP0CL81 117 aa10.33□□□□□ -0.76
SCN8A-207ENST00000551216 GAGE12IP0CL82 117 aa10.33□□□□□ -0.76
SCN8A-207ENST00000551216 TCTAP57738 103 aa10.33□□□□□ -0.76
SCN8A-207ENST00000551216 ZMAT5Q9UDW3 170 aaKnown RBP10.33□□□□□ -0.76
SCN8A-207ENST00000551216 Q9UF83 564 aa10.33□□□□□ -0.76
SCN8A-207ENST00000551216 FLNBO75369 2602 aaKnown RBP10.32□□□□□ -0.76
SCN8A-207ENST00000551216 TM2D2Q9BX73 214 aa10.32□□□□□ -0.76
SCN8A-207ENST00000551216 LYRM9A8MSI8 78 aa10.31□□□□□ -0.76
SCN8A-207ENST00000551216 TMEM170BQ5T4T1 132 aa10.31□□□□□ -0.76
SCN8A-207ENST00000551216 MAPKAPK5-AS1Q8N8E1 139 aa10.31□□□□□ -0.76
SCN8A-207ENST00000551216 DEFB104AQ8WTQ1 72 aa10.31□□□□□ -0.76
SCN8A-207ENST00000551216 FAM104AQ969W3 186 aa10.31□□□□□ -0.76
SCN8A-207ENST00000551216 X6R8D5 127 aa10.31□□□□□ -0.76
SCN8A-207ENST00000551216 TRGV4A0A0C4DH28 118 aa10.3□□□□□ -0.76
SCN8A-207ENST00000551216 ZNF25P17030 456 aaPredicted RBP10.3□□□□□ -0.76
SCN8A-207ENST00000551216 F8P00451 2351 aa10.3□□□□□ -0.76
SCN8A-207ENST00000551216 TINCRA0A1B0GVN0 87 aa10.29□□□□□ -0.76
SCN8A-207ENST00000551216 TMEM223A0PJW6 202 aa10.29□□□□□ -0.76
SCN8A-207ENST00000551216 PHLDA1Q8WV24 401 aaPredicted RBP10.29□□□□□ -0.76
SCN8A-207ENST00000551216 OPRPNQ99935 248 aaPredicted RBP10.29□□□□□ -0.76
SCN8A-207ENST00000551216 TTTY13Q9BZ97 58 aa10.29□□□□□ -0.76
SCN8A-207ENST00000551216 H3BRM9 83 aa10.29□□□□□ -0.76
SCN8A-207ENST00000551216 TAX1BP3O14907 124 aa10.29□□□□□ -0.76
SCN8A-207ENST00000551216 FHL2Q14192 279 aa10.29□□□□□ -0.76
SCN8A-207ENST00000551216 DGAT2L7PQ6IED9 249 aa10.29□□□□□ -0.76
SCN8A-207ENST00000551216 LINC00469Q8N7U9 141 aa10.29□□□□□ -0.76
SCN8A-207ENST00000551216 SPATA3Q8NHX4 192 aa10.29□□□□□ -0.76
SCN8A-207ENST00000551216 PLEKHB2Q96CS7 222 aa10.29□□□□□ -0.76
SCN8A-207ENST00000551216 IGHV3-38A0A0C4DH36 116 aa10.28□□□□□ -0.76
SCN8A-207ENST00000551216 ZNF815PA8K554 130 aa10.28□□□□□ -0.76
SCN8A-207ENST00000551216 LEPROTO15243 131 aa10.28□□□□□ -0.76
SCN8A-207ENST00000551216 ZNF22P17026 224 aaPredicted RBP10.28□□□□□ -0.76
SCN8A-207ENST00000551216 CEND1Q8N111 149 aa10.28□□□□□ -0.76
SCN8A-207ENST00000551216 TEP1Q99973 2627 aaKnown RBP10.27□□□□□ -0.76
SCN8A-207ENST00000551216 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.27□□□□□ -0.77
SCN8A-207ENST00000551216 IGKV2-29A2NJV5 120 aaPredicted RBP10.27□□□□□ -0.77
SCN8A-207ENST00000551216 LINC00694P0DN24 101 aa10.27□□□□□ -0.77
SCN8A-207ENST00000551216 MIFP14174 115 aa10.27□□□□□ -0.77
SCN8A-207ENST00000551216 TIRAPP58753 221 aa10.27□□□□□ -0.77
SCN8A-207ENST00000551216 SHISA2Q6UWI4 295 aa10.27□□□□□ -0.77
SCN8A-207ENST00000551216 FAM19A3Q7Z5A8 133 aa10.27□□□□□ -0.77
SCN8A-207ENST00000551216 SBSPONQ8IVN8 264 aa10.27□□□□□ -0.77
SCN8A-207ENST00000551216 NIPBLQ6KC79 2804 aaeCLIP10.27□□□□□ -0.77
SCN8A-207ENST00000551216 NOTCH3Q9UM47 2321 aa10.27□□□□□ -0.77
SCN8A-207ENST00000551216 A0A0J9YXV3 536 aa10.26□□□□□ -0.77
SCN8A-207ENST00000551216 GAGE12JA6NER3 117 aa10.26□□□□□ -0.77
SCN8A-207ENST00000551216 J3QQQ9 107 aa10.26□□□□□ -0.77
SCN8A-207ENST00000551216 EMP1P54849 157 aa10.26□□□□□ -0.77
SCN8A-207ENST00000551216 GAGE4Q13068 117 aa10.26□□□□□ -0.77
SCN8A-207ENST00000551216 GAGE5Q13069 117 aa10.26□□□□□ -0.77
SCN8A-207ENST00000551216 GAGE13Q4V321 117 aa10.26□□□□□ -0.77
SCN8A-207ENST00000551216 IGLV5-45A0A087WSX0 123 aa10.25□□□□□ -0.77
SCN8A-207ENST00000551216 LGALS3P17931 250 aaKnown RBP10.25□□□□□ -0.77
SCN8A-207ENST00000551216 TMEM243Q9BU79 118 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms