RNA–Protein interactions for RNA: ENST00000550790.1

PACS2-210, Transcript of phosphofurin acidic cluster sorting protein 2, humanhuman

TSL 3

Gene PACS2, Length 1,163 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2-210ENST00000550790 TEX46H3BTG2 121 aa13.62□□□□□ -0.23
PACS2-210ENST00000550790 HNRNPA3P51991 378 aaKnown RBP13.62□□□□□ -0.23
PACS2-210ENST00000550790 RPL37AP61513 92 aaKnown RBP13.62□□□□□ -0.23
PACS2-210ENST00000550790 SERTAD4-AS1Q5TG53 156 aa13.62□□□□□ -0.23
PACS2-210ENST00000550790 TMEM243Q9BU79 118 aa13.62□□□□□ -0.23
PACS2-210ENST00000550790 MED9Q9NWA0 146 aa13.62□□□□□ -0.23
PACS2-210ENST00000550790 IFNA1P01562 189 aa13.61□□□□□ -0.23
PACS2-210ENST00000550790 SLPIP03973 132 aa13.61□□□□□ -0.23
PACS2-210ENST00000550790 TRGC1P0CF51 173 aa13.61□□□□□ -0.23
PACS2-210ENST00000550790 CIRBPQ14011 172 aaKnown RBP13.61□□□□□ -0.23
PACS2-210ENST00000550790 NUDT10Q8NFP7 164 aa13.61□□□□□ -0.23
PACS2-210ENST00000550790 NUDT11Q96G61 164 aa13.61□□□□□ -0.23
PACS2-210ENST00000550790 CNFNQ9BYD5 112 aa13.61□□□□□ -0.23
PACS2-210ENST00000550790 DPH3P1Q9H4G8 78 aa13.61□□□□□ -0.23
PACS2-210ENST00000550790 UBR4Q5T4S7 5183 aa13.6□□□□□ -0.23
PACS2-210ENST00000550790 BIN3Q9NQY0 253 aa13.6□□□□□ -0.23
PACS2-210ENST00000550790 BCL2P10415 239 aa13.59□□□□□ -0.23
PACS2-210ENST00000550790 CTRLP40313 264 aa13.59□□□□□ -0.23
PACS2-210ENST00000550790 GATD1Q8NB37 220 aa13.57□□□□□ -0.24
PACS2-210ENST00000550790 hDV102S1A0JD36 115 aa13.56□□□□□ -0.24
PACS2-210ENST00000550790 ALKAL2Q6UX46 152 aa13.56□□□□□ -0.24
PACS2-210ENST00000550790 K7EN84 100 aa13.55□□□□□ -0.24
PACS2-210ENST00000550790 COTL1Q14019 142 aa13.55□□□□□ -0.24
PACS2-210ENST00000550790 OCC1Q8TAD7 63 aa13.55□□□□□ -0.24
PACS2-210ENST00000550790 AMTP48728 403 aa13.54□□□□□ -0.24
PACS2-210ENST00000550790 TWIST1Q15672 202 aa13.54□□□□□ -0.24
PACS2-210ENST00000550790 RNASE7Q9H1E1 156 aaKnown RBP13.54□□□□□ -0.24
PACS2-210ENST00000550790 TAGLN2P37802 199 aaKnown RBP13.53□□□□□ -0.24
PACS2-210ENST00000550790 LYPD6BQ8NI32 183 aa13.53□□□□□ -0.24
PACS2-210ENST00000550790 RPP21Q9H633 154 aaKnown RBP13.53□□□□□ -0.24
PACS2-210ENST00000550790 IGHV3-64A0A075B6Q5 118 aa13.52□□□□□ -0.25
PACS2-210ENST00000550790 TRAV26-2A0A0B4J265 109 aa13.52□□□□□ -0.25
PACS2-210ENST00000550790 UBE2L6O14933 153 aa13.52□□□□□ -0.25
PACS2-210ENST00000550790 GTSF1Q8WW33 167 aa13.52□□□□□ -0.25
PACS2-210ENST00000550790 FOXA3P55318 350 aaPredicted RBP13.51□□□□□ -0.25
PACS2-210ENST00000550790 C15orf56Q8N910 161 aa13.51□□□□□ -0.25
PACS2-210ENST00000550790 RNF185Q96GF1 192 aa13.51□□□□□ -0.25
PACS2-210ENST00000550790 AP5S1Q9NUS5 200 aa13.51□□□□□ -0.25
PACS2-210ENST00000550790 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.5□□□□□ -0.25
PACS2-210ENST00000550790 A0A087WYN8 130 aa13.49□□□□□ -0.25
PACS2-210ENST00000550790 GAGE12HA6NDE8 117 aa13.49□□□□□ -0.25
PACS2-210ENST00000550790 CHTF8P0CG12 524 aa13.49□□□□□ -0.25
PACS2-210ENST00000550790 MT1HL1P0DM35 61 aa13.49□□□□□ -0.25
PACS2-210ENST00000550790 SPACA4Q8TDM5 124 aa13.49□□□□□ -0.25
PACS2-210ENST00000550790 NCR2O95944 276 aa13.48□□□□□ -0.25
PACS2-210ENST00000550790 RPL39LQ96EH5 51 aaKnown RBP13.48□□□□□ -0.25
PACS2-210ENST00000550790 TNXBP22105 4242 aa13.47□□□□□ -0.25
PACS2-210ENST00000550790 CFAP161Q6P656 301 aa13.47□□□□□ -0.25
PACS2-210ENST00000550790 Q6ZRU5 148 aa13.47□□□□□ -0.25
PACS2-210ENST00000550790 PLAC8Q9NZF1 115 aa13.47□□□□□ -0.25
PACS2-210ENST00000550790 H7C423 109 aa13.46□□□□□ -0.25
PACS2-210ENST00000550790 DPH3Q96FX2 82 aa13.46□□□□□ -0.25
PACS2-210ENST00000550790 FAM231BA6NCW3 169 aa13.45□□□□□ -0.26
PACS2-210ENST00000550790 BLOC1S1P78537 153 aa13.45□□□□□ -0.26
PACS2-210ENST00000550790 TEX261Q6UWH6 196 aa13.45□□□□□ -0.26
PACS2-210ENST00000550790 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.44□□□□□ -0.26
PACS2-210ENST00000550790 IGKV2-29A2NJV5 120 aaPredicted RBP13.44□□□□□ -0.26
PACS2-210ENST00000550790 TMEM250H0YL14 139 aa13.44□□□□□ -0.26
PACS2-210ENST00000550790 RPS10P46783 165 aaKnown RBP13.44□□□□□ -0.26
PACS2-210ENST00000550790 FAM231DQ6ZW35 169 aa13.44□□□□□ -0.26
PACS2-210ENST00000550790 CHCHD10Q8WYQ3 142 aaPredicted RBP13.44□□□□□ -0.26
PACS2-210ENST00000550790 PLA2G2DQ9UNK4 145 aa13.44□□□□□ -0.26
PACS2-210ENST00000550790 IGKV3OR2-268A0A0C4DH90 116 aa13.43□□□□□ -0.26
PACS2-210ENST00000550790 TRBV6-5A0A0K0K1A5 114 aa13.43□□□□□ -0.26
PACS2-210ENST00000550790 SDHAF1A6NFY7 115 aa13.43□□□□□ -0.26
PACS2-210ENST00000550790 FGF6P10767 208 aa13.43□□□□□ -0.26
PACS2-210ENST00000550790 SMIM15Q7Z3B0 74 aa13.43□□□□□ -0.26
PACS2-210ENST00000550790 GATCO43716 136 aaKnown RBP13.42□□□□□ -0.26
PACS2-210ENST00000550790 COX6A2Q02221 97 aa13.42□□□□□ -0.26
PACS2-210ENST00000550790 AMMECR1LQ6DCA0 310 aa13.42□□□□□ -0.26
PACS2-210ENST00000550790 GVQW2A0A096LPI5 108 aaPredicted RBP13.41□□□□□ -0.26
PACS2-210ENST00000550790 A8MWL6 223 aa13.41□□□□□ -0.26
PACS2-210ENST00000550790 GAS8-AS1O95177 125 aa13.41□□□□□ -0.26
PACS2-210ENST00000550790 FOXI1Q12951 378 aa13.41□□□□□ -0.26
PACS2-210ENST00000550790 HIGD2BQ4VC39 106 aa13.41□□□□□ -0.26
PACS2-210ENST00000550790 PRSS3P2Q8NHM4 247 aa13.41□□□□□ -0.26
PACS2-210ENST00000550790 I3L3M4 83 aa13.4□□□□□ -0.26
PACS2-210ENST00000550790 APCSP02743 223 aa13.4□□□□□ -0.26
PACS2-210ENST00000550790 ESDP10768 282 aa13.4□□□□□ -0.26
PACS2-210ENST00000550790 RNASEKQ6P5S7 137 aaKnown RBP13.4□□□□□ -0.26
PACS2-210ENST00000550790 NDUFS6O75380 124 aaKnown RBP13.39□□□□□ -0.27
PACS2-210ENST00000550790 ZNF25P17030 456 aaPredicted RBP13.39□□□□□ -0.27
PACS2-210ENST00000550790 CT83Q5H943 113 aa13.39□□□□□ -0.27
PACS2-210ENST00000550790 OR5A1Q8NGJ0 315 aa13.39□□□□□ -0.27
PACS2-210ENST00000550790 PHOX2AO14813 284 aa13.38□□□□□ -0.27
PACS2-210ENST00000550790 PMCHP20382 165 aa13.38□□□□□ -0.27
PACS2-210ENST00000550790 TSHBP01222 138 aa13.37□□□□□ -0.27
PACS2-210ENST00000550790 FAM210AQ96ND0 272 aa13.37□□□□□ -0.27
PACS2-210ENST00000550790 LINC00959A0A1B0GUT2 108 aa13.36□□□□□ -0.27
PACS2-210ENST00000550790 POLR2KP53803 58 aaKnown RBP13.36□□□□□ -0.27
PACS2-210ENST00000550790 MAJINQ3KP22 176 aa13.35□□□□□ -0.27
PACS2-210ENST00000550790 TMEM191AQ9H0A3 160 aa13.35□□□□□ -0.27
PACS2-210ENST00000550790 IFITM2Q01629 132 aa13.34□□□□□ -0.27
PACS2-210ENST00000550790 MRPL52Q86TS9 123 aaKnown RBP13.34□□□□□ -0.27
PACS2-210ENST00000550790 C7orf33Q8WU49 177 aa13.34□□□□□ -0.27
PACS2-210ENST00000550790 TSKUQ8WUA8 353 aa13.34□□□□□ -0.27
PACS2-210ENST00000550790 ST20Q9HBF5 79 aa13.34□□□□□ -0.27
PACS2-210ENST00000550790 CDC42SE2Q9NRR3 84 aa13.34□□□□□ -0.27
PACS2-210ENST00000550790 IGKV2-24A0A0C4DH68 120 aa13.33□□□□□ -0.28
PACS2-210ENST00000550790 TRBV27A0A0K0K1C4 114 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms