RNA–Protein interactions for RNA: ENST00000550662.1

NPAS3-208, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-208ENST00000550662 PPP3R2Q96LZ3 170 aa0.46□□□□□ -2.34
NPAS3-208ENST00000550662 BCL9LQ86UU0 1499 aa0.46□□□□□ -2.34
NPAS3-208ENST00000550662 MYH8P13535 1937 aa0.45□□□□□ -2.34
NPAS3-208ENST00000550662 CFAP126Q5VTH2 177 aa0.45□□□□□ -2.34
NPAS3-208ENST00000550662 LENEPQ9Y5L5 61 aa0.45□□□□□ -2.34
NPAS3-208ENST00000550662 SSBP3-AS1Q7Z2R9 100 aa0.44□□□□□ -2.34
NPAS3-208ENST00000550662 PPIP5K1Q6PFW1 1433 aa0.44□□□□□ -2.34
NPAS3-208ENST00000550662 ASXL3Q9C0F0 2248 aa0.44□□□□□ -2.34
NPAS3-208ENST00000550662 PATJQ8NI35 1801 aa0.43□□□□□ -2.34
NPAS3-208ENST00000550662 ZNF815PA8K554 130 aa0.43□□□□□ -2.34
NPAS3-208ENST00000550662 TTC9CQ8N5M4 171 aa0.43□□□□□ -2.34
NPAS3-208ENST00000550662 ZNF609O15014 1411 aa0.43□□□□□ -2.34
NPAS3-208ENST00000550662 PRDM2Q13029 1718 aa0.43□□□□□ -2.34
NPAS3-208ENST00000550662 ARAP2Q8WZ64 1704 aa0.42□□□□□ -2.34
NPAS3-208ENST00000550662 APOC2P02655 101 aa0.42□□□□□ -2.34
NPAS3-208ENST00000550662 SPINK8P0C7L1 97 aa0.42□□□□□ -2.34
NPAS3-208ENST00000550662 RPL13AP3Q6NVV1 102 aa0.42□□□□□ -2.34
NPAS3-208ENST00000550662 CELSR2Q9HCU4 2923 aa0.42□□□□□ -2.34
NPAS3-208ENST00000550662 MRC1P22897 1456 aa0.41□□□□□ -2.34
NPAS3-208ENST00000550662 PI4KAP42356 2102 aa0.41□□□□□ -2.34
NPAS3-208ENST00000550662 MIF4GDA9UHW6 222 aaKnown RBP0.41□□□□□ -2.34
NPAS3-208ENST00000550662 MDN1Q9NU22 5596 aa0.41□□□□□ -2.34
NPAS3-208ENST00000550662 A0A0D9SFI3 127 aa0.4□□□□□ -2.35
NPAS3-208ENST00000550662 AKAIN1P0CW23 69 aa0.4□□□□□ -2.35
NPAS3-208ENST00000550662 SMIM4Q8WVI0 70 aa0.4□□□□□ -2.35
NPAS3-208ENST00000550662 IGSF10Q6WRI0 2623 aa0.39□□□□□ -2.35
NPAS3-208ENST00000550662 LOC100130705A0A1B0GUX0 176 aa0.39□□□□□ -2.35
NPAS3-208ENST00000550662 M0R135 149 aa0.39□□□□□ -2.35
NPAS3-208ENST00000550662 SPAG11BQ08648 103 aa0.39□□□□□ -2.35
NPAS3-208ENST00000550662 SPAG11AQ6PDA7 123 aa0.39□□□□□ -2.35
NPAS3-208ENST00000550662 C8orf59Q8N0T1 100 aaPredicted RBP0.39□□□□□ -2.35
NPAS3-208ENST00000550662 CYP4F30PQ9H0H9 118 aa0.39□□□□□ -2.35
NPAS3-208ENST00000550662 FAM208BQ5VWN6 2430 aa0.39□□□□□ -2.35
NPAS3-208ENST00000550662 NCOR2Q9Y618 2525 aa0.39□□□□□ -2.35
NPAS3-208ENST00000550662 DOCK1Q14185 1865 aa0.39□□□□□ -2.35
NPAS3-208ENST00000550662 ANK2Q01484 3957 aa0.38□□□□□ -2.35
NPAS3-208ENST00000550662 AHCTF1Q8WYP5 2266 aa0.38□□□□□ -2.35
NPAS3-208ENST00000550662 ROCK2O75116 1388 aaKnown RBP0.38□□□□□ -2.35
NPAS3-208ENST00000550662 CATR1Q13166 79 aa0.38□□□□□ -2.35
NPAS3-208ENST00000550662 CNFNQ9BYD5 112 aa0.38□□□□□ -2.35
NPAS3-208ENST00000550662 NPVFQ9HCQ7 196 aa0.38□□□□□ -2.35
NPAS3-208ENST00000550662 DOCK2Q92608 1830 aa0.37□□□□□ -2.35
NPAS3-208ENST00000550662 IFNGP01579 166 aa0.37□□□□□ -2.35
NPAS3-208ENST00000550662 PP6455Q8WZ26 134 aa0.37□□□□□ -2.35
NPAS3-208ENST00000550662 SPANXDQ9BXN6 97 aa0.37□□□□□ -2.35
NPAS3-208ENST00000550662 V9GYH0 126 aa0.37□□□□□ -2.35
NPAS3-208ENST00000550662 CPSF1Q10570 1443 aaKnown RBP0.37□□□□□ -2.35
NPAS3-208ENST00000550662 SCN3BQ9NY72 215 aa0.36□□□□□ -2.35
NPAS3-208ENST00000550662 SYNE2Q8WXH0 6885 aaKnown RBP0.36□□□□□ -2.35
NPAS3-208ENST00000550662 KTN1Q86UP2 1357 aaKnown RBP0.35□□□□□ -2.35
NPAS3-208ENST00000550662 CTXND1A0A1B0GTU2 59 aa0.35□□□□□ -2.35
NPAS3-208ENST00000550662 A2ML1A8K2U0 1454 aa0.35□□□□□ -2.35
NPAS3-208ENST00000550662 CACNA1CQ13936 2221 aa0.34□□□□□ -2.35
NPAS3-208ENST00000550662 SSSCA1O60232 199 aa0.34□□□□□ -2.36
NPAS3-208ENST00000550662 KMT2DO14686 5537 aa0.34□□□□□ -2.36
NPAS3-208ENST00000550662 OTOGQ6ZRI0 2925 aa0.34□□□□□ -2.36
NPAS3-208ENST00000550662 UNC79Q9P2D8 2635 aa0.34□□□□□ -2.36
NPAS3-208ENST00000550662 C5orf38Q86SI9 138 aa0.33□□□□□ -2.36
NPAS3-208ENST00000550662 MGST2Q99735 147 aa0.33□□□□□ -2.36
NPAS3-208ENST00000550662 SPTBN2O15020 2390 aa0.32□□□□□ -2.36
NPAS3-208ENST00000550662 NALCNQ8IZF0 1738 aa0.32□□□□□ -2.36
NPAS3-208ENST00000550662 TRBV7-3A0A075B6L6 115 aa0.31□□□□□ -2.36
NPAS3-208ENST00000550662 TNFP01375 233 aa0.31□□□□□ -2.36
NPAS3-208ENST00000550662 COX17Q14061 63 aa0.31□□□□□ -2.36
NPAS3-208ENST00000550662 COMMD6Q7Z4G1 85 aa0.31□□□□□ -2.36
NPAS3-208ENST00000550662 AMELXQ99217 191 aa0.31□□□□□ -2.36
NPAS3-208ENST00000550662 NDUFA4L2Q9NRX3 87 aa0.31□□□□□ -2.36
NPAS3-208ENST00000550662 U3KQA8 63 aa0.31□□□□□ -2.36
NPAS3-208ENST00000550662 WNK3Q9BYP7 1800 aa0.31□□□□□ -2.36
NPAS3-208ENST00000550662 QRICH2Q9H0J4 1663 aa0.3□□□□□ -2.36
NPAS3-208ENST00000550662 LRRC37A2A6NM11 1700 aa0.3□□□□□ -2.36
NPAS3-208ENST00000550662 LRP1Q07954 4544 aaKnown RBP0.3□□□□□ -2.36
NPAS3-208ENST00000550662 DYNLRB1Q9NP97 96 aa0.3□□□□□ -2.36
NPAS3-208ENST00000550662 PRO0255Q9UI72 69 aa0.3□□□□□ -2.36
NPAS3-208ENST00000550662 MACF1Q9UPN3 7388 aaKnown RBP0.29□□□□□ -2.36
NPAS3-208ENST00000550662 DLEU1O43261 78 aa0.29□□□□□ -2.36
NPAS3-208ENST00000550662 MRPL54Q6P161 138 aaKnown RBP0.29□□□□□ -2.36
NPAS3-208ENST00000550662 KDM3BQ7LBC6 1761 aa0.29□□□□□ -2.36
NPAS3-208ENST00000550662 S100A3P33764 101 aa0.28□□□□□ -2.36
NPAS3-208ENST00000550662 DMBT1Q9UGM3 2413 aaPredicted RBP0.28□□□□□ -2.36
NPAS3-208ENST00000550662 FSIP2Q5CZC0 6907 aa0.28□□□□□ -2.36
NPAS3-208ENST00000550662 BAGE2Q86Y30 109 aa0.27□□□□□ -2.37
NPAS3-208ENST00000550662 HRNRQ86YZ3 2850 aaPredicted RBP0.26□□□□□ -2.37
NPAS3-208ENST00000550662 A0A1B0GV90 55 aa0.26□□□□□ -2.37
NPAS3-208ENST00000550662 OOSP1A8MZH6 123 aa0.26□□□□□ -2.37
NPAS3-208ENST00000550662 F8VRH5 84 aa0.26□□□□□ -2.37
NPAS3-208ENST00000550662 UQCR11O14957 56 aa0.26□□□□□ -2.37
NPAS3-208ENST00000550662 TPPP2P59282 170 aa0.26□□□□□ -2.37
NPAS3-208ENST00000550662 SPCS1Q9Y6A9 102 aa0.26□□□□□ -2.37
NPAS3-208ENST00000550662 BIVM-ERCC5R4GMW8 1640 aa0.26□□□□□ -2.37
NPAS3-208ENST00000550662 PLXNB2O15031 1838 aa0.26□□□□□ -2.37
NPAS3-208ENST00000550662 HIVEP3Q5T1R4 2406 aa0.26□□□□□ -2.37
NPAS3-208ENST00000550662 CHD9Q3L8U1 2897 aa0.25□□□□□ -2.37
NPAS3-208ENST00000550662 LOC285095A0A1B0GVY8 99 aa0.25□□□□□ -2.37
NPAS3-208ENST00000550662 APOC3P02656 99 aa0.25□□□□□ -2.37
NPAS3-208ENST00000550662 HAMPP81172 84 aa0.25□□□□□ -2.37
NPAS3-208ENST00000550662 TMEM170BQ5T4T1 132 aa0.25□□□□□ -2.37
NPAS3-208ENST00000550662 C9orf153Q5TBE3 101 aa0.25□□□□□ -2.37
NPAS3-208ENST00000550662 MYOZ3Q8TDC0 251 aa0.25□□□□□ -2.37
NPAS3-208ENST00000550662 TSLPQ969D9 159 aa0.25□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms