RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 SPACA4Q8TDM5 124 aa13.77□□□□□ -0.21
SMARCC2-210ENST00000550519 DPH3P1Q9H4G8 78 aa13.77□□□□□ -0.21
SMARCC2-210ENST00000550519 XKRY2A2RUG3 117 aa13.76□□□□□ -0.21
SMARCC2-210ENST00000550519 RAB19A4D1S5 217 aa13.76□□□□□ -0.21
SMARCC2-210ENST00000550519 LYZL1Q6UWQ5 148 aa13.76□□□□□ -0.21
SMARCC2-210ENST00000550519 DPH3Q96FX2 82 aa13.76□□□□□ -0.21
SMARCC2-210ENST00000550519 NTF3P20783 257 aa13.75□□□□□ -0.21
SMARCC2-210ENST00000550519 GNG4P50150 75 aa13.75□□□□□ -0.21
SMARCC2-210ENST00000550519 UBE2L6O14933 153 aa13.74□□□□□ -0.21
SMARCC2-210ENST00000550519 IFNA1P01562 189 aa13.74□□□□□ -0.21
SMARCC2-210ENST00000550519 COTL1Q14019 142 aa13.74□□□□□ -0.21
SMARCC2-210ENST00000550519 C9orf62Q8N4C0 152 aa13.74□□□□□ -0.21
SMARCC2-210ENST00000550519 TRBV20OR9-2A0A075B6H5 130 aa13.73□□□□□ -0.21
SMARCC2-210ENST00000550519 AMTP48728 403 aa13.73□□□□□ -0.21
SMARCC2-210ENST00000550519 SULT1A2P50226 295 aa13.73□□□□□ -0.21
SMARCC2-210ENST00000550519 WDR73Q6P4I2 378 aa13.73□□□□□ -0.21
SMARCC2-210ENST00000550519 C15orf56Q8N910 161 aa13.73□□□□□ -0.21
SMARCC2-210ENST00000550519 PLAC8Q9NZF1 115 aa13.73□□□□□ -0.21
SMARCC2-210ENST00000550519 PDE6DO43924 150 aa13.71□□□□□ -0.21
SMARCC2-210ENST00000550519 CTRLP40313 264 aa13.71□□□□□ -0.21
SMARCC2-210ENST00000550519 MEF2BQ02080 365 aaPredicted RBP13.71□□□□□ -0.21
SMARCC2-210ENST00000550519 BIN3Q9NQY0 253 aa13.71□□□□□ -0.21
SMARCC2-210ENST00000550519 GAGE12HA6NDE8 117 aa13.7□□□□□ -0.22
SMARCC2-210ENST00000550519 CFAP161Q6P656 301 aa13.7□□□□□ -0.22
SMARCC2-210ENST00000550519 CNFNQ9BYD5 112 aa13.7□□□□□ -0.22
SMARCC2-210ENST00000550519 TEX46H3BTG2 121 aa13.69□□□□□ -0.22
SMARCC2-210ENST00000550519 GATD1Q8NB37 220 aa13.69□□□□□ -0.22
SMARCC2-210ENST00000550519 NUDT10Q8NFP7 164 aa13.69□□□□□ -0.22
SMARCC2-210ENST00000550519 NUDT11Q96G61 164 aa13.69□□□□□ -0.22
SMARCC2-210ENST00000550519 MED9Q9NWA0 146 aa13.69□□□□□ -0.22
SMARCC2-210ENST00000550519 PHOX2AO14813 284 aa13.68□□□□□ -0.22
SMARCC2-210ENST00000550519 RPS10P46783 165 aaKnown RBP13.68□□□□□ -0.22
SMARCC2-210ENST00000550519 COX6A2Q02221 97 aa13.68□□□□□ -0.22
SMARCC2-210ENST00000550519 TWIST1Q15672 202 aa13.67□□□□□ -0.22
SMARCC2-210ENST00000550519 EIF5AL1Q6IS14 154 aaKnown RBP13.67□□□□□ -0.22
SMARCC2-210ENST00000550519 C7orf33Q8WU49 177 aa13.67□□□□□ -0.22
SMARCC2-210ENST00000550519 TRAV26-2A0A0B4J265 109 aa13.66□□□□□ -0.22
SMARCC2-210ENST00000550519 IGKV3OR2-268A0A0C4DH90 116 aa13.66□□□□□ -0.22
SMARCC2-210ENST00000550519 NDUFS6O75380 124 aaKnown RBP13.66□□□□□ -0.22
SMARCC2-210ENST00000550519 PRSS3P2Q8NHM4 247 aa13.66□□□□□ -0.22
SMARCC2-210ENST00000550519 BCL2P10415 239 aa13.65□□□□□ -0.22
SMARCC2-210ENST00000550519 HIGD2BQ4VC39 106 aa13.65□□□□□ -0.22
SMARCC2-210ENST00000550519 Q6ZNX1 250 aa13.65□□□□□ -0.22
SMARCC2-210ENST00000550519 CHCHD10Q8WYQ3 142 aaPredicted RBP13.65□□□□□ -0.22
SMARCC2-210ENST00000550519 NCR2O95944 276 aa13.64□□□□□ -0.23
SMARCC2-210ENST00000550519 AMMECR1LQ6DCA0 310 aa13.64□□□□□ -0.23
SMARCC2-210ENST00000550519 GVQW2A0A096LPI5 108 aaPredicted RBP13.63□□□□□ -0.23
SMARCC2-210ENST00000550519 H7C423 109 aa13.63□□□□□ -0.23
SMARCC2-210ENST00000550519 MAJINQ3KP22 176 aa13.63□□□□□ -0.23
SMARCC2-210ENST00000550519 RPP21Q9H633 154 aaKnown RBP13.63□□□□□ -0.23
SMARCC2-210ENST00000550519 TNXBP22105 4242 aa13.63□□□□□ -0.23
SMARCC2-210ENST00000550519 RPL39LQ96EH5 51 aaKnown RBP13.62□□□□□ -0.23
SMARCC2-210ENST00000550519 RNASE7Q9H1E1 156 aaKnown RBP13.62□□□□□ -0.23
SMARCC2-210ENST00000550519 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.61□□□□□ -0.23
SMARCC2-210ENST00000550519 IGKV2-24A0A0C4DH68 120 aa13.61□□□□□ -0.23
SMARCC2-210ENST00000550519 IGKV2-29A2NJV5 120 aaPredicted RBP13.61□□□□□ -0.23
SMARCC2-210ENST00000550519 K7EN84 100 aa13.61□□□□□ -0.23
SMARCC2-210ENST00000550519 FGF6P10767 208 aa13.61□□□□□ -0.23
SMARCC2-210ENST00000550519 RNASEKQ6P5S7 137 aaKnown RBP13.61□□□□□ -0.23
SMARCC2-210ENST00000550519 GTSF1Q8WW33 167 aa13.61□□□□□ -0.23
SMARCC2-210ENST00000550519 APCSP02743 223 aa13.6□□□□□ -0.23
SMARCC2-210ENST00000550519 FOXA3P55318 350 aaPredicted RBP13.6□□□□□ -0.23
SMARCC2-210ENST00000550519 FOXI1Q12951 378 aa13.6□□□□□ -0.23
SMARCC2-210ENST00000550519 STPG4Q8N801 248 aa13.6□□□□□ -0.23
SMARCC2-210ENST00000550519 OCC1Q8TAD7 63 aa13.6□□□□□ -0.23
SMARCC2-210ENST00000550519 LINC01600Q96MT4 127 aa13.6□□□□□ -0.23
SMARCC2-210ENST00000550519 SDHAF1A6NFY7 115 aa13.59□□□□□ -0.23
SMARCC2-210ENST00000550519 PRR3P79522 188 aaKnown RBP13.59□□□□□ -0.23
SMARCC2-210ENST00000550519 TEX261Q6UWH6 196 aa13.59□□□□□ -0.23
SMARCC2-210ENST00000550519 A0A096LNI7 61 aa13.58□□□□□ -0.24
SMARCC2-210ENST00000550519 TAGLN2P37802 199 aaKnown RBP13.58□□□□□ -0.24
SMARCC2-210ENST00000550519 SMIM15Q7Z3B0 74 aa13.58□□□□□ -0.24
SMARCC2-210ENST00000550519 LRP2P98164 4655 aa13.57□□□□□ -0.24
SMARCC2-210ENST00000550519 ZNF25P17030 456 aaPredicted RBP13.57□□□□□ -0.24
SMARCC2-210ENST00000550519 OR5A1Q8NGJ0 315 aa13.57□□□□□ -0.24
SMARCC2-210ENST00000550519 FAM231BA6NCW3 169 aa13.56□□□□□ -0.24
SMARCC2-210ENST00000550519 LYPD6BQ8NI32 183 aa13.56□□□□□ -0.24
SMARCC2-210ENST00000550519 TRBV6-5A0A0K0K1A5 114 aa13.54□□□□□ -0.24
SMARCC2-210ENST00000550519 LINC00959A0A1B0GUT2 108 aa13.54□□□□□ -0.24
SMARCC2-210ENST00000550519 I3L3M4 83 aa13.54□□□□□ -0.24
SMARCC2-210ENST00000550519 XCL1P47992 114 aa13.54□□□□□ -0.24
SMARCC2-210ENST00000550519 SLC51BQ86UW2 128 aa13.54□□□□□ -0.24
SMARCC2-210ENST00000550519 LINC00474Q9P2X8 69 aa13.54□□□□□ -0.24
SMARCC2-210ENST00000550519 RNF213Q63HN8 5207 aa13.54□□□□□ -0.24
SMARCC2-210ENST00000550519 ESDP10768 282 aa13.53□□□□□ -0.24
SMARCC2-210ENST00000550519 PMCHP20382 165 aa13.53□□□□□ -0.24
SMARCC2-210ENST00000550519 BTF3L4Q96K17 158 aa13.53□□□□□ -0.24
SMARCC2-210ENST00000550519 IGHV1-58A0A0C4DH39 117 aa13.52□□□□□ -0.25
SMARCC2-210ENST00000550519 CCL25O15444 150 aa13.52□□□□□ -0.25
SMARCC2-210ENST00000550519 LINC00526Q96FQ7 95 aa13.52□□□□□ -0.25
SMARCC2-210ENST00000550519 A0A0J9YXV3 536 aa13.51□□□□□ -0.25
SMARCC2-210ENST00000550519 GATCO43716 136 aaKnown RBP13.51□□□□□ -0.25
SMARCC2-210ENST00000550519 FAM231DQ6ZW35 169 aa13.51□□□□□ -0.25
SMARCC2-210ENST00000550519 TMEM101Q96IK0 257 aa13.51□□□□□ -0.25
SMARCC2-210ENST00000550519 FAM210AQ96ND0 272 aa13.51□□□□□ -0.25
SMARCC2-210ENST00000550519 PKIGQ9Y2B9 76 aa13.51□□□□□ -0.25
SMARCC2-210ENST00000550519 A8MWL6 223 aa13.5□□□□□ -0.25
SMARCC2-210ENST00000550519 GAS8-AS1O95177 125 aa13.5□□□□□ -0.25
SMARCC2-210ENST00000550519 TSHBP01222 138 aa13.5□□□□□ -0.25
SMARCC2-210ENST00000550519 ODF1Q14990 250 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms