RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 AP1S3Q96PC3 154 aa6.17□□□□□ -1.42
TRAFD1-207ENST00000550051 PRR3P79522 188 aaKnown RBP6.16□□□□□ -1.42
TRAFD1-207ENST00000550051 SRSF9Q13242 221 aaKnown RBP eCLIP6.16□□□□□ -1.42
TRAFD1-207ENST00000550051 SPINK6Q6UWN8 80 aa6.16□□□□□ -1.42
TRAFD1-207ENST00000550051 TMUB2Q71RG4 321 aa6.16□□□□□ -1.42
TRAFD1-207ENST00000550051 C15orf56Q8N910 161 aa6.16□□□□□ -1.42
TRAFD1-207ENST00000550051 PRSS3P2Q8NHM4 247 aa6.16□□□□□ -1.42
TRAFD1-207ENST00000550051 GTSF1Q8WW33 167 aa6.16□□□□□ -1.42
TRAFD1-207ENST00000550051 MBD3L1Q8WWY6 194 aa6.16□□□□□ -1.42
TRAFD1-207ENST00000550051 CYTL1Q9NRR1 136 aa6.16□□□□□ -1.42
TRAFD1-207ENST00000550051 FXYD6-FXYD2A0A087WZ82 144 aa6.15□□□□□ -1.42
TRAFD1-207ENST00000550051 IGLC6P0CF74 106 aa6.15□□□□□ -1.42
TRAFD1-207ENST00000550051 MAJINQ3KP22 176 aa6.15□□□□□ -1.42
TRAFD1-207ENST00000550051 SUMO4Q6EEV6 95 aa6.15□□□□□ -1.42
TRAFD1-207ENST00000550051 RASL11AQ6T310 242 aa6.15□□□□□ -1.42
TRAFD1-207ENST00000550051 STPG4Q8N801 248 aa6.15□□□□□ -1.42
TRAFD1-207ENST00000550051 NIT2Q9NQR4 276 aa6.15□□□□□ -1.42
TRAFD1-207ENST00000550051 GAGE12HA6NDE8 117 aa6.14□□□□□ -1.43
TRAFD1-207ENST00000550051 F2Z2F3 143 aa6.14□□□□□ -1.43
TRAFD1-207ENST00000550051 SULT1A2P50226 295 aa6.14□□□□□ -1.43
TRAFD1-207ENST00000550051 NKX2-5P52952 324 aaPredicted RBP6.14□□□□□ -1.43
TRAFD1-207ENST00000550051 CACNG7P62955 275 aa6.14□□□□□ -1.43
TRAFD1-207ENST00000550051 ODF1Q14990 250 aa6.14□□□□□ -1.43
TRAFD1-207ENST00000550051 REG3GQ6UW15 175 aa6.14□□□□□ -1.43
TRAFD1-207ENST00000550051 SFT2D1Q8WV19 159 aa6.14□□□□□ -1.43
TRAFD1-207ENST00000550051 GVQW2A0A096LPI5 108 aaPredicted RBP6.13□□□□□ -1.43
TRAFD1-207ENST00000550051 UBE2L6O14933 153 aa6.13□□□□□ -1.43
TRAFD1-207ENST00000550051 MGPP08493 103 aa6.13□□□□□ -1.43
TRAFD1-207ENST00000550051 RPS20P60866 119 aaKnown RBP6.13□□□□□ -1.43
TRAFD1-207ENST00000550051 FER1L6-AS1Q8NA97 138 aa6.13□□□□□ -1.43
TRAFD1-207ENST00000550051 LINC00474Q9P2X8 69 aa6.13□□□□□ -1.43
TRAFD1-207ENST00000550051 IGKV2-24A0A0C4DH68 120 aa6.12□□□□□ -1.43
TRAFD1-207ENST00000550051 UMAD1C9J7I0 102 aa6.12□□□□□ -1.43
TRAFD1-207ENST00000550051 G3V3Q6 166 aa6.12□□□□□ -1.43
TRAFD1-207ENST00000550051 PFDN1O60925 122 aa6.12□□□□□ -1.43
TRAFD1-207ENST00000550051 RPL35P42766 123 aaKnown RBP6.12□□□□□ -1.43
TRAFD1-207ENST00000550051 AMTP48728 403 aa6.12□□□□□ -1.43
TRAFD1-207ENST00000550051 COTL1Q14019 142 aa6.12□□□□□ -1.43
TRAFD1-207ENST00000550051 LYPD6BQ8NI32 183 aa6.12□□□□□ -1.43
TRAFD1-207ENST00000550051 A0A096LNI7 61 aa6.11□□□□□ -1.43
TRAFD1-207ENST00000550051 C19orf71A6NCJ1 209 aa6.11□□□□□ -1.43
TRAFD1-207ENST00000550051 H7C423 109 aa6.11□□□□□ -1.43
TRAFD1-207ENST00000550051 GAS8-AS1O95177 125 aa6.11□□□□□ -1.43
TRAFD1-207ENST00000550051 TRGC1P0CF51 173 aa6.11□□□□□ -1.43
TRAFD1-207ENST00000550051 HIGD2BQ4VC39 106 aa6.11□□□□□ -1.43
TRAFD1-207ENST00000550051 CT83Q5H943 113 aa6.11□□□□□ -1.43
TRAFD1-207ENST00000550051 C9orf62Q8N4C0 152 aa6.11□□□□□ -1.43
TRAFD1-207ENST00000550051 KCNRGQ8N5I3 272 aa6.11□□□□□ -1.43
TRAFD1-207ENST00000550051 OR2D3Q8NGH3 330 aa6.11□□□□□ -1.43
TRAFD1-207ENST00000550051 CHCHD10Q8WYQ3 142 aaPredicted RBP6.11□□□□□ -1.43
TRAFD1-207ENST00000550051 TPPP3Q9BW30 176 aa6.11□□□□□ -1.43
TRAFD1-207ENST00000550051 PKIGQ9Y2B9 76 aa6.11□□□□□ -1.43
TRAFD1-207ENST00000550051 XKRY2A2RUG3 117 aa6.1□□□□□ -1.43
TRAFD1-207ENST00000550051 ARPC5O15511 151 aa6.1□□□□□ -1.43
TRAFD1-207ENST00000550051 NTF3P20783 257 aa6.1□□□□□ -1.43
TRAFD1-207ENST00000550051 Q6ZRP5 223 aa6.1□□□□□ -1.43
TRAFD1-207ENST00000550051 FAM213BQ8TBF2 198 aa6.1□□□□□ -1.43
TRAFD1-207ENST00000550051 C11orf52Q96A22 123 aa6.1□□□□□ -1.43
TRAFD1-207ENST00000550051 SMIM12Q96EX1 92 aa6.1□□□□□ -1.43
TRAFD1-207ENST00000550051 NCR2O95944 276 aa6.09□□□□□ -1.43
TRAFD1-207ENST00000550051 FOXI1Q12951 378 aa6.09□□□□□ -1.43
TRAFD1-207ENST00000550051 LYZL1Q6UWQ5 148 aa6.09□□□□□ -1.43
TRAFD1-207ENST00000550051 IGKV3OR2-268A0A0C4DH90 116 aa6.08□□□□□ -1.44
TRAFD1-207ENST00000550051 A0A1B0GV50 99 aa6.08□□□□□ -1.44
TRAFD1-207ENST00000550051 IFNA1P01562 189 aa6.08□□□□□ -1.44
TRAFD1-207ENST00000550051 LINC00310P59036 64 aa6.08□□□□□ -1.44
TRAFD1-207ENST00000550051 CCL20P78556 96 aa6.08□□□□□ -1.44
TRAFD1-207ENST00000550051 CENPWQ5EE01 88 aa6.08□□□□□ -1.44
TRAFD1-207ENST00000550051 AMMECR1LQ6DCA0 310 aa6.08□□□□□ -1.44
TRAFD1-207ENST00000550051 GATD1Q8NB37 220 aa6.08□□□□□ -1.44
TRAFD1-207ENST00000550051 NUDT10Q8NFP7 164 aa6.08□□□□□ -1.44
TRAFD1-207ENST00000550051 OR5A1Q8NGJ0 315 aa6.08□□□□□ -1.44
TRAFD1-207ENST00000550051 NUDT11Q96G61 164 aa6.08□□□□□ -1.44
TRAFD1-207ENST00000550051 CNFNQ9BYD5 112 aa6.08□□□□□ -1.44
TRAFD1-207ENST00000550051 TRAV1-1A0A0B4J248 108 aa6.07□□□□□ -1.44
TRAFD1-207ENST00000550051 IGHV1-58A0A0C4DH39 117 aa6.07□□□□□ -1.44
TRAFD1-207ENST00000550051 ZNF345Q14585 488 aa6.07□□□□□ -1.44
TRAFD1-207ENST00000550051 MANBALQ9NQG1 85 aa6.07□□□□□ -1.44
TRAFD1-207ENST00000550051 RAB19A4D1S5 217 aa6.06□□□□□ -1.44
TRAFD1-207ENST00000550051 FGF6P10767 208 aa6.06□□□□□ -1.44
TRAFD1-207ENST00000550051 ZNF25P17030 456 aaPredicted RBP6.06□□□□□ -1.44
TRAFD1-207ENST00000550051 CTRLP40313 264 aa6.06□□□□□ -1.44
TRAFD1-207ENST00000550051 RNASEKQ6P5S7 137 aaKnown RBP6.06□□□□□ -1.44
TRAFD1-207ENST00000550051 Q6ZNX1 250 aa6.06□□□□□ -1.44
TRAFD1-207ENST00000550051 FAM210AQ96ND0 272 aa6.06□□□□□ -1.44
TRAFD1-207ENST00000550051 BIN3Q9NQY0 253 aa6.06□□□□□ -1.44
TRAFD1-207ENST00000550051 LINC00959A0A1B0GUT2 108 aa6.05□□□□□ -1.44
TRAFD1-207ENST00000550051 FAM231BA6NCW3 169 aa6.05□□□□□ -1.44
TRAFD1-207ENST00000550051 GNG4P50150 75 aa6.05□□□□□ -1.44
TRAFD1-207ENST00000550051 SYCNQ0VAF6 134 aa6.05□□□□□ -1.44
TRAFD1-207ENST00000550051 TWIST1Q15672 202 aa6.05□□□□□ -1.44
TRAFD1-207ENST00000550051 TEX261Q6UWH6 196 aa6.05□□□□□ -1.44
TRAFD1-207ENST00000550051 CARD19Q96LW7 228 aa6.05□□□□□ -1.44
TRAFD1-207ENST00000550051 GNG13Q9P2W3 67 aa6.05□□□□□ -1.44
TRAFD1-207ENST00000550051 TRBV20OR9-2A0A075B6H5 130 aa6.04□□□□□ -1.44
TRAFD1-207ENST00000550051 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.04□□□□□ -1.44
TRAFD1-207ENST00000550051 IGKV2-29A2NJV5 120 aaPredicted RBP6.04□□□□□ -1.44
TRAFD1-207ENST00000550051 HMSDA8MTL9 139 aa6.04□□□□□ -1.44
TRAFD1-207ENST00000550051 CCL25O15444 150 aa6.04□□□□□ -1.44
TRAFD1-207ENST00000550051 APCSP02743 223 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms