RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 CENPWQ5EE01 88 aa8.59□□□□□ -1.03
TROAP-211ENST00000549891 SMIM12Q96EX1 92 aa8.59□□□□□ -1.03
TROAP-211ENST00000549891 GFRA4Q9GZZ7 299 aa8.59□□□□□ -1.03
TROAP-211ENST00000549891 KANTRA0A1W2PQU2 76 aa8.58□□□□□ -1.04
TROAP-211ENST00000549891 RPS10P46783 165 aaKnown RBP8.58□□□□□ -1.04
TROAP-211ENST00000549891 COX6A2Q02221 97 aa8.58□□□□□ -1.04
TROAP-211ENST00000549891 C11orf52Q96A22 123 aa8.58□□□□□ -1.04
TROAP-211ENST00000549891 TNXBP22105 4242 aa8.58□□□□□ -1.04
TROAP-211ENST00000549891 C19orf71A6NCJ1 209 aa8.57□□□□□ -1.04
TROAP-211ENST00000549891 GAGE12HA6NDE8 117 aa8.57□□□□□ -1.04
TROAP-211ENST00000549891 NDUFS6O75380 124 aaKnown RBP8.57□□□□□ -1.04
TROAP-211ENST00000549891 GNG4P50150 75 aa8.57□□□□□ -1.04
TROAP-211ENST00000549891 MAJINQ3KP22 176 aa8.57□□□□□ -1.04
TROAP-211ENST00000549891 C15orf56Q8N910 161 aa8.57□□□□□ -1.04
TROAP-211ENST00000549891 BIN3Q9NQY0 253 aa8.57□□□□□ -1.04
TROAP-211ENST00000549891 GNG13Q9P2W3 67 aa8.57□□□□□ -1.04
TROAP-211ENST00000549891 HMSDA8MTL9 139 aa8.56□□□□□ -1.04
TROAP-211ENST00000549891 SMLR1H3BR10 107 aa8.56□□□□□ -1.04
TROAP-211ENST00000549891 TEX46H3BTG2 121 aa8.56□□□□□ -1.04
TROAP-211ENST00000549891 BCL2L11O43521 198 aa8.56□□□□□ -1.04
TROAP-211ENST00000549891 IFNA1P01562 189 aa8.56□□□□□ -1.04
TROAP-211ENST00000549891 NTF3P20783 257 aa8.56□□□□□ -1.04
TROAP-211ENST00000549891 CCL20P78556 96 aa8.56□□□□□ -1.04
TROAP-211ENST00000549891 LYZL1Q6UWQ5 148 aa8.56□□□□□ -1.04
TROAP-211ENST00000549891 GTSF1Q8WW33 167 aa8.56□□□□□ -1.04
TROAP-211ENST00000549891 LINC01600Q96MT4 127 aa8.56□□□□□ -1.04
TROAP-211ENST00000549891 PKIGQ9Y2B9 76 aa8.56□□□□□ -1.04
TROAP-211ENST00000549891 IGKV2-24A0A0C4DH68 120 aa8.55□□□□□ -1.04
TROAP-211ENST00000549891 IGKV3OR2-268A0A0C4DH90 116 aa8.55□□□□□ -1.04
TROAP-211ENST00000549891 RGS21Q2M5E4 152 aa8.55□□□□□ -1.04
TROAP-211ENST00000549891 AMMECR1LQ6DCA0 310 aa8.55□□□□□ -1.04
TROAP-211ENST00000549891 TRAV1-1A0A0B4J248 108 aa8.54□□□□□ -1.04
TROAP-211ENST00000549891 PRR3P79522 188 aaKnown RBP8.54□□□□□ -1.04
TROAP-211ENST00000549891 HIGD2BQ4VC39 106 aa8.54□□□□□ -1.04
TROAP-211ENST00000549891 C9orf62Q8N4C0 152 aa8.54□□□□□ -1.04
TROAP-211ENST00000549891 STPG4Q8N801 248 aa8.54□□□□□ -1.04
TROAP-211ENST00000549891 PRSS3P2Q8NHM4 247 aa8.54□□□□□ -1.04
TROAP-211ENST00000549891 CHCHD10Q8WYQ3 142 aaPredicted RBP8.54□□□□□ -1.04
TROAP-211ENST00000549891 LINC00474Q9P2X8 69 aa8.54□□□□□ -1.04
TROAP-211ENST00000549891 GVQW2A0A096LPI5 108 aaPredicted RBP8.53□□□□□ -1.04
TROAP-211ENST00000549891 H7C423 109 aa8.53□□□□□ -1.04
TROAP-211ENST00000549891 PDE6DO43924 150 aa8.53□□□□□ -1.04
TROAP-211ENST00000549891 NCR2O95944 276 aa8.53□□□□□ -1.04
TROAP-211ENST00000549891 TWIST1Q15672 202 aa8.53□□□□□ -1.04
TROAP-211ENST00000549891 RNF213Q63HN8 5207 aa8.53□□□□□ -1.04
TROAP-211ENST00000549891 LRP2P98164 4655 aa8.52□□□□□ -1.05
TROAP-211ENST00000549891 RAB19A4D1S5 217 aa8.52□□□□□ -1.05
TROAP-211ENST00000549891 CTRLP40313 264 aa8.52□□□□□ -1.05
TROAP-211ENST00000549891 MEF2BQ02080 365 aaPredicted RBP8.52□□□□□ -1.05
TROAP-211ENST00000549891 RNASEKQ6P5S7 137 aaKnown RBP8.52□□□□□ -1.05
TROAP-211ENST00000549891 REG3GQ6UW15 175 aa8.52□□□□□ -1.05
TROAP-211ENST00000549891 CNFNQ9BYD5 112 aa8.52□□□□□ -1.05
TROAP-211ENST00000549891 APCSP02743 223 aa8.51□□□□□ -1.05
TROAP-211ENST00000549891 EIF5AL1Q6IS14 154 aaKnown RBP8.51□□□□□ -1.05
TROAP-211ENST00000549891 TEX261Q6UWH6 196 aa8.51□□□□□ -1.05
TROAP-211ENST00000549891 SPINK6Q6UWN8 80 aa8.51□□□□□ -1.05
TROAP-211ENST00000549891 SMIM15Q7Z3B0 74 aa8.51□□□□□ -1.05
TROAP-211ENST00000549891 GATD1Q8NB37 220 aa8.51□□□□□ -1.05
TROAP-211ENST00000549891 LYPD6BQ8NI32 183 aa8.51□□□□□ -1.05
TROAP-211ENST00000549891 MED9Q9NWA0 146 aa8.51□□□□□ -1.05
TROAP-211ENST00000549891 A0A096LNI7 61 aa8.5□□□□□ -1.05
TROAP-211ENST00000549891 A0A0J9YXV3 536 aa8.5□□□□□ -1.05
TROAP-211ENST00000549891 ZNF25P17030 456 aaPredicted RBP8.5□□□□□ -1.05
TROAP-211ENST00000549891 NUDT10Q8NFP7 164 aa8.5□□□□□ -1.05
TROAP-211ENST00000549891 NUDT11Q96G61 164 aa8.5□□□□□ -1.05
TROAP-211ENST00000549891 TRBV20OR9-2A0A075B6H5 130 aa8.49□□□□□ -1.05
TROAP-211ENST00000549891 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.49□□□□□ -1.05
TROAP-211ENST00000549891 TRAV26-2A0A0B4J265 109 aa8.49□□□□□ -1.05
TROAP-211ENST00000549891 IGKV2-29A2NJV5 120 aaPredicted RBP8.49□□□□□ -1.05
TROAP-211ENST00000549891 FGF6P10767 208 aa8.49□□□□□ -1.05
TROAP-211ENST00000549891 Q6ZNX1 250 aa8.49□□□□□ -1.05
TROAP-211ENST00000549891 OR5A1Q8NGJ0 315 aa8.49□□□□□ -1.05
TROAP-211ENST00000549891 TMEM101Q96IK0 257 aa8.49□□□□□ -1.05
TROAP-211ENST00000549891 BTF3L4Q96K17 158 aa8.49□□□□□ -1.05
TROAP-211ENST00000549891 FOXI1Q12951 378 aa8.48□□□□□ -1.05
TROAP-211ENST00000549891 RPL39LQ96EH5 51 aaKnown RBP8.48□□□□□ -1.05
TROAP-211ENST00000549891 RPP21Q9H633 154 aaKnown RBP8.48□□□□□ -1.05
TROAP-211ENST00000549891 IGHV1-58A0A0C4DH39 117 aa8.47□□□□□ -1.05
TROAP-211ENST00000549891 SDHAF1A6NFY7 115 aa8.47□□□□□ -1.05
TROAP-211ENST00000549891 TAGLN2P37802 199 aaKnown RBP8.47□□□□□ -1.05
TROAP-211ENST00000549891 XCL1P47992 114 aa8.47□□□□□ -1.05
TROAP-211ENST00000549891 Q6ZRP5 223 aa8.47□□□□□ -1.05
TROAP-211ENST00000549891 CARD19Q96LW7 228 aa8.47□□□□□ -1.05
TROAP-211ENST00000549891 I3L3M4 83 aa8.46□□□□□ -1.06
TROAP-211ENST00000549891 BCL2P10415 239 aa8.46□□□□□ -1.06
TROAP-211ENST00000549891 PMCHP20382 165 aa8.46□□□□□ -1.06
TROAP-211ENST00000549891 FAM210AQ96ND0 272 aa8.46□□□□□ -1.06
TROAP-211ENST00000549891 LINC00959A0A1B0GUT2 108 aa8.45□□□□□ -1.06
TROAP-211ENST00000549891 ZNF561-AS1K7EIQ3 104 aa8.45□□□□□ -1.06
TROAP-211ENST00000549891 CCL25O15444 150 aa8.45□□□□□ -1.06
TROAP-211ENST00000549891 KRTAP10-8P60410 259 aa8.45□□□□□ -1.06
TROAP-211ENST00000549891 SS18Q15532 418 aa8.45□□□□□ -1.06
TROAP-211ENST00000549891 RNASE7Q9H1E1 156 aaKnown RBP8.45□□□□□ -1.06
TROAP-211ENST00000549891 ISOC2Q96AB3 205 aa8.44□□□□□ -1.06
TROAP-211ENST00000549891 MRAP2Q96G30 205 aa8.44□□□□□ -1.06
TROAP-211ENST00000549891 TRBV6-5A0A0K0K1A5 114 aa8.43□□□□□ -1.06
TROAP-211ENST00000549891 SYCNQ0VAF6 134 aa8.43□□□□□ -1.06
TROAP-211ENST00000549891 SRSF9Q13242 221 aaKnown RBP eCLIP8.43□□□□□ -1.06
TROAP-211ENST00000549891 CD164L2Q6UWJ8 174 aa8.43□□□□□ -1.06
TROAP-211ENST00000549891 FAM231BA6NCW3 169 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 130.8 ms