RNA–Protein interactions for RNA: ENST00000549705.1

CNOT2-218, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 3

Gene CNOT2, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-218ENST00000549705 CALML5Q9NZT1 146 aa-1.14□□□□□ -2.59
CNOT2-218ENST00000549705 NDUFA12Q9UI09 145 aa-1.14□□□□□ -2.59
CNOT2-218ENST00000549705 LYSTQ99698 3801 aa-1.14□□□□□ -2.59
CNOT2-218ENST00000549705 LRRC37A2A6NM11 1700 aa-1.15□□□□□ -2.59
CNOT2-218ENST00000549705 A0A1W2PRE2 83 aa-1.15□□□□□ -2.59
CNOT2-218ENST00000549705 PIRTP0C851 137 aa-1.15□□□□□ -2.59
CNOT2-218ENST00000549705 HLA-DRB4P13762 266 aa-1.15□□□□□ -2.59
CNOT2-218ENST00000549705 C9orf116Q5BN46 136 aaPredicted RBP-1.15□□□□□ -2.59
CNOT2-218ENST00000549705 RPL7L1Q6DKI1 246 aaKnown RBP-1.15□□□□□ -2.59
CNOT2-218ENST00000549705 ZNF818PQ6ZRF7 136 aa-1.15□□□□□ -2.59
CNOT2-218ENST00000549705 STOML2Q9UJZ1 356 aa-1.15□□□□□ -2.59
CNOT2-218ENST00000549705 R4GMQ9 66 aa-1.15□□□□□ -2.59
CNOT2-218ENST00000549705 HLA-DRB4X5D2U9 266 aa-1.15□□□□□ -2.59
CNOT2-218ENST00000549705 DNAH9Q9NYC9 4486 aa-1.16□□□□□ -2.59
CNOT2-218ENST00000549705 NBASA2RRP1 2371 aa-1.16□□□□□ -2.6
CNOT2-218ENST00000549705 RPL7P18124 248 aaKnown RBP-1.16□□□□□ -2.6
CNOT2-218ENST00000549705 DEFB112Q30KQ8 113 aa-1.16□□□□□ -2.6
CNOT2-218ENST00000549705 CLLU1Q5K131 121 aa-1.16□□□□□ -2.6
CNOT2-218ENST00000549705 SPANXN1Q5VSR9 72 aa-1.16□□□□□ -2.6
CNOT2-218ENST00000549705 LINC01545Q5VT33 79 aa-1.16□□□□□ -2.6
CNOT2-218ENST00000549705 OR9Q1Q8NGQ5 310 aa-1.16□□□□□ -2.6
CNOT2-218ENST00000549705 MAGOHBQ96A72 148 aaKnown RBP-1.16□□□□□ -2.6
CNOT2-218ENST00000549705 AGPAT4-IT1Q9H0P7 198 aa-1.16□□□□□ -2.6
CNOT2-218ENST00000549705 LRRC37A3O60309 1634 aa-1.16□□□□□ -2.6
CNOT2-218ENST00000549705 ZZEF1O43149 2961 aa-1.16□□□□□ -2.6
CNOT2-218ENST00000549705 VPS13BQ7Z7G8 4022 aa-1.16□□□□□ -2.6
CNOT2-218ENST00000549705 EIF3AQ14152 1382 aaKnown RBP-1.17□□□□□ -2.6
CNOT2-218ENST00000549705 DNAH2Q9P225 4427 aa-1.17□□□□□ -2.6
CNOT2-218ENST00000549705 DPM2O94777 84 aa-1.17□□□□□ -2.6
CNOT2-218ENST00000549705 PAEPP09466 180 aa-1.17□□□□□ -2.6
CNOT2-218ENST00000549705 CCL18P55774 89 aa-1.17□□□□□ -2.6
CNOT2-218ENST00000549705 Q6JHZ5 121 aa-1.17□□□□□ -2.6
CNOT2-218ENST00000549705 PPP1R2P3Q6NXS1 205 aa-1.17□□□□□ -2.6
CNOT2-218ENST00000549705 C10orf82Q8WW14 230 aa-1.17□□□□□ -2.6
CNOT2-218ENST00000549705 ATPIF1Q9UII2 106 aa-1.17□□□□□ -2.6
CNOT2-218ENST00000549705 GAPVD1Q14C86 1478 aa-1.18□□□□□ -2.6
CNOT2-218ENST00000549705 RNF213Q63HN8 5207 aa-1.18□□□□□ -2.6
CNOT2-218ENST00000549705 KALRNO60229 2985 aa-1.18□□□□□ -2.6
CNOT2-218ENST00000549705 CTXND1A0A1B0GTU2 59 aa-1.18□□□□□ -2.6
CNOT2-218ENST00000549705 M0R135 149 aa-1.18□□□□□ -2.6
CNOT2-218ENST00000549705 MT1AP04731 61 aa-1.18□□□□□ -2.6
CNOT2-218ENST00000549705 COX17Q14061 63 aa-1.18□□□□□ -2.6
CNOT2-218ENST00000549705 TMEM170BQ5T4T1 132 aa-1.18□□□□□ -2.6
CNOT2-218ENST00000549705 VSTM2AQ8TAG5 236 aa-1.18□□□□□ -2.6
CNOT2-218ENST00000549705 LINC00312Q9Y6C7 94 aa-1.18□□□□□ -2.6
CNOT2-218ENST00000549705 NSD3Q9BZ95 1437 aa-1.18□□□□□ -2.6
CNOT2-218ENST00000549705 NIPBLQ6KC79 2804 aaeCLIP-1.18□□□□□ -2.6
CNOT2-218ENST00000549705 RYR2Q92736 4967 aa-1.19□□□□□ -2.6
CNOT2-218ENST00000549705 XIRP1Q702N8 1843 aaKnown RBP-1.19□□□□□ -2.6
CNOT2-218ENST00000549705 DMXL1Q9Y485 3027 aa-1.19□□□□□ -2.6
CNOT2-218ENST00000549705 SYNMO15061 1565 aa-1.19□□□□□ -2.6
CNOT2-218ENST00000549705 NCR2O95944 276 aa-1.19□□□□□ -2.6
CNOT2-218ENST00000549705 PPP1R17O96001 155 aa-1.19□□□□□ -2.6
CNOT2-218ENST00000549705 IFNGP01579 166 aa-1.19□□□□□ -2.6
CNOT2-218ENST00000549705 COX8AP10176 69 aa-1.19□□□□□ -2.6
CNOT2-218ENST00000549705 UBE2G1P62253 170 aa-1.19□□□□□ -2.6
CNOT2-218ENST00000549705 TMEM244Q5VVB8 128 aa-1.19□□□□□ -2.6
CNOT2-218ENST00000549705 OR8I2Q8N0Y5 310 aa-1.19□□□□□ -2.6
CNOT2-218ENST00000549705 TMEM35BQ8NCS4 154 aa-1.19□□□□□ -2.6
CNOT2-218ENST00000549705 MNS1Q8NEH6 495 aa-1.19□□□□□ -2.6
CNOT2-218ENST00000549705 CASKIN1Q8WXD9 1431 aa-1.19□□□□□ -2.6
CNOT2-218ENST00000549705 BANF2Q9H503 90 aa-1.19□□□□□ -2.6
CNOT2-218ENST00000549705 MUC22E2RYF6 1773 aaPredicted RBP-1.19□□□□□ -2.6
CNOT2-218ENST00000549705 AKAP13Q12802 2813 aa-1.2□□□□□ -2.6
CNOT2-218ENST00000549705 KDM5CP41229 1560 aa-1.2□□□□□ -2.6
CNOT2-218ENST00000549705 MT-ND4LP03901 98 aa-1.2□□□□□ -2.6
CNOT2-218ENST00000549705 PIPP12273 146 aaPredicted RBP-1.2□□□□□ -2.6
CNOT2-218ENST00000549705 TRIQKQ629K1 86 aa-1.2□□□□□ -2.6
CNOT2-218ENST00000549705 TOMM20LQ6UXN7 152 aa-1.2□□□□□ -2.6
CNOT2-218ENST00000549705 SAR1AQ9NR31 198 aa-1.2□□□□□ -2.6
CNOT2-218ENST00000549705 LSM2Q9Y333 95 aaKnown RBP-1.2□□□□□ -2.6
CNOT2-218ENST00000549705 KNL1Q8NG31 2342 aa-1.2□□□□□ -2.6
CNOT2-218ENST00000549705 ANKRD11Q6UB99 2663 aaPredicted RBP-1.2□□□□□ -2.6
CNOT2-218ENST00000549705 ROCK1Q13464 1354 aa-1.21□□□□□ -2.6
CNOT2-218ENST00000549705 OVOS2A0A0G2JMS6 1433 aa-1.21□□□□□ -2.6
CNOT2-218ENST00000549705 DAPK1P53355 1430 aa-1.21□□□□□ -2.6
CNOT2-218ENST00000549705 TRBV20-1A0A075B6N2 111 aa-1.21□□□□□ -2.6
CNOT2-218ENST00000549705 SYS1-DBNDD2H3BUS1 97 aa-1.21□□□□□ -2.6
CNOT2-218ENST00000549705 CBLN1P23435 193 aa-1.21□□□□□ -2.6
CNOT2-218ENST00000549705 CCL8P80075 99 aa-1.21□□□□□ -2.6
CNOT2-218ENST00000549705 SPTSSBQ8NFR3 76 aa-1.21□□□□□ -2.6
CNOT2-218ENST00000549705 CHMP6Q96FZ7 201 aa-1.21□□□□□ -2.6
CNOT2-218ENST00000549705 HOPXQ9BPY8 73 aaPredicted RBP-1.21□□□□□ -2.6
CNOT2-218ENST00000549705 MRPL40Q9NQ50 206 aaKnown RBP-1.21□□□□□ -2.6
CNOT2-218ENST00000549705 POLA1P09884 1462 aaPredicted RBP-1.21□□□□□ -2.6
CNOT2-218ENST00000549705 MRC1P22897 1456 aa-1.21□□□□□ -2.6
CNOT2-218ENST00000549705 ERCC6Q03468 1493 aa-1.21□□□□□ -2.6
CNOT2-218ENST00000549705 PXDNQ92626 1479 aa-1.21□□□□□ -2.6
CNOT2-218ENST00000549705 KDM5AP29375 1690 aaKnown RBP-1.21□□□□□ -2.6
CNOT2-218ENST00000549705 DOCK1Q14185 1865 aa-1.21□□□□□ -2.6
CNOT2-218ENST00000549705 MYH8P13535 1937 aa-1.21□□□□□ -2.6
CNOT2-218ENST00000549705 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-1.22□□□□□ -2.6
CNOT2-218ENST00000549705 PITX3O75364 302 aa-1.22□□□□□ -2.6
CNOT2-218ENST00000549705 RPS28P62857 69 aaKnown RBP-1.22□□□□□ -2.6
CNOT2-218ENST00000549705 SCIMPQ6UWF3 145 aa-1.22□□□□□ -2.6
CNOT2-218ENST00000549705 CTAGE3PQ8IX95 158 aa-1.22□□□□□ -2.6
CNOT2-218ENST00000549705 C9orf62Q8N4C0 152 aa-1.22□□□□□ -2.6
CNOT2-218ENST00000549705 USMG5Q96IX5 58 aa-1.22□□□□□ -2.6
CNOT2-218ENST00000549705 GID8Q9NWU2 228 aa-1.22□□□□□ -2.6
CNOT2-218ENST00000549705 APLNQ9ULZ1 77 aa-1.22□□□□□ -2.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms