RNA–Protein interactions for RNA: ENST00000549416.1

PRDM4-204, Transcript of PR/SET domain 4, humanhuman

TSL 2

Gene PRDM4, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-204ENST00000549416 IGHV1-18A0A0C4DH31 117 aa2.41□□□□□ -2.02
PRDM4-204ENST00000549416 A0A0G2JND7 137 aa2.41□□□□□ -2.02
PRDM4-204ENST00000549416 C16orf90A8MZG2 172 aa2.41□□□□□ -2.02
PRDM4-204ENST00000549416 E7EUB6 86 aa2.41□□□□□ -2.02
PRDM4-204ENST00000549416 KLKP1Q107X0 134 aa2.41□□□□□ -2.02
PRDM4-204ENST00000549416 VMO1Q7Z5L0 202 aa2.41□□□□□ -2.02
PRDM4-204ENST00000549416 RNF5Q99942 180 aa2.41□□□□□ -2.02
PRDM4-204ENST00000549416 DYNLRB1Q9NP97 96 aa2.41□□□□□ -2.02
PRDM4-204ENST00000549416 CDC42SE1Q9NRR8 79 aa2.41□□□□□ -2.02
PRDM4-204ENST00000549416 PRO1854Q9UHT4 67 aa2.41□□□□□ -2.02
PRDM4-204ENST00000549416 TIAM2Q8IVF5 1701 aa2.41□□□□□ -2.02
PRDM4-204ENST00000549416 ATG2BQ96BY7 2078 aa2.41□□□□□ -2.02
PRDM4-204ENST00000549416 TOGARAM1Q9Y4F4 1720 aa2.4□□□□□ -2.02
PRDM4-204ENST00000549416 HCG22E2RYF7 251 aa2.4□□□□□ -2.03
PRDM4-204ENST00000549416 ERC2-IT1O76042 136 aa2.4□□□□□ -2.03
PRDM4-204ENST00000549416 UBE2D3P61077 147 aa2.4□□□□□ -2.03
PRDM4-204ENST00000549416 UBE2D2P62837 147 aa2.4□□□□□ -2.03
PRDM4-204ENST00000549416 FAM167A-AS1Q96KT0 104 aa2.4□□□□□ -2.03
PRDM4-204ENST00000549416 RREB1Q92766 1687 aa2.4□□□□□ -2.03
PRDM4-204ENST00000549416 DOCK2Q92608 1830 aa2.4□□□□□ -2.03
PRDM4-204ENST00000549416 DOCK1Q14185 1865 aa2.39□□□□□ -2.03
PRDM4-204ENST00000549416 STRCP1A6NGW2 1772 aa2.39□□□□□ -2.03
PRDM4-204ENST00000549416 COX6CP09669 75 aa2.39□□□□□ -2.03
PRDM4-204ENST00000549416 PRB4P10163 310 aaPredicted RBP2.39□□□□□ -2.03
PRDM4-204ENST00000549416 ZNF56Q15929 161 aa2.39□□□□□ -2.03
PRDM4-204ENST00000549416 XAF1Q6GPH4 301 aa2.39□□□□□ -2.03
PRDM4-204ENST00000549416 LYPD5Q6UWN5 251 aa2.39□□□□□ -2.03
PRDM4-204ENST00000549416 C2orf82Q6UX34 121 aa2.39□□□□□ -2.03
PRDM4-204ENST00000549416 ZCCHC23Q6ZST2 131 aa2.39□□□□□ -2.03
PRDM4-204ENST00000549416 C6orf201Q7Z4U5 140 aa2.39□□□□□ -2.03
PRDM4-204ENST00000549416 C20orf166-AS1Q96NR2 134 aa2.39□□□□□ -2.03
PRDM4-204ENST00000549416 MYO5AQ9Y4I1 1855 aaKnown RBP2.39□□□□□ -2.03
PRDM4-204ENST00000549416 PTPRFP10586 1907 aa2.38□□□□□ -2.03
PRDM4-204ENST00000549416 PATJQ8NI35 1801 aa2.38□□□□□ -2.03
PRDM4-204ENST00000549416 IGHV3-64A0A075B6Q5 118 aa2.38□□□□□ -2.03
PRDM4-204ENST00000549416 TRAV10A0A0B4J240 114 aa2.38□□□□□ -2.03
PRDM4-204ENST00000549416 TRAV40A0A0B4J280 105 aa2.38□□□□□ -2.03
PRDM4-204ENST00000549416 COX8AP10176 69 aa2.38□□□□□ -2.03
PRDM4-204ENST00000549416 MIFP14174 115 aa2.38□□□□□ -2.03
PRDM4-204ENST00000549416 NRAPQ86VF7 1730 aa2.38□□□□□ -2.03
PRDM4-204ENST00000549416 Q8N6K4 173 aa2.38□□□□□ -2.03
PRDM4-204ENST00000549416 TVP23CQ96ET8 276 aa2.38□□□□□ -2.03
PRDM4-204ENST00000549416 V9GYH0 126 aa2.38□□□□□ -2.03
PRDM4-204ENST00000549416 ZNF831Q5JPB2 1677 aa2.37□□□□□ -2.03
PRDM4-204ENST00000549416 SHANK1Q9Y566 2161 aa2.37□□□□□ -2.03
PRDM4-204ENST00000549416 C4AP0C0L4 1744 aa2.37□□□□□ -2.03
PRDM4-204ENST00000549416 C4BP0C0L5 1744 aa2.37□□□□□ -2.03
PRDM4-204ENST00000549416 COL5A3P25940 1745 aaPredicted RBP2.37□□□□□ -2.03
PRDM4-204ENST00000549416 ANAPC1Q9H1A4 1944 aa2.37□□□□□ -2.03
PRDM4-204ENST00000549416 TRBV7-3A0A075B6L6 115 aa2.37□□□□□ -2.03
PRDM4-204ENST00000549416 TRAV23DV6A0A075B6W5 121 aa2.37□□□□□ -2.03
PRDM4-204ENST00000549416 A0A0D9SFI3 127 aa2.37□□□□□ -2.03
PRDM4-204ENST00000549416 A0A1B0GU33 70 aa2.37□□□□□ -2.03
PRDM4-204ENST00000549416 IGKV1-17P01599 117 aa2.37□□□□□ -2.03
PRDM4-204ENST00000549416 IGLV3-19P01714 112 aa2.37□□□□□ -2.03
PRDM4-204ENST00000549416 HMGN2P05204 90 aaKnown RBP2.37□□□□□ -2.03
PRDM4-204ENST00000549416 EDDM3BP56851 147 aa2.37□□□□□ -2.03
PRDM4-204ENST00000549416 MIR22HGQ0VDD5 57 aa2.37□□□□□ -2.03
PRDM4-204ENST00000549416 ZNF791Q3KP31 576 aaPredicted RBP2.37□□□□□ -2.03
PRDM4-204ENST00000549416 ZNF818PQ6ZRF7 136 aa2.37□□□□□ -2.03
PRDM4-204ENST00000549416 NDUFA11Q86Y39 141 aa2.37□□□□□ -2.03
PRDM4-204ENST00000549416 Q8NAQ8 132 aa2.37□□□□□ -2.03
PRDM4-204ENST00000549416 ST20-AS1Q8NBB2 130 aa2.37□□□□□ -2.03
PRDM4-204ENST00000549416 LIMD2Q9BT23 127 aa2.37□□□□□ -2.03
PRDM4-204ENST00000549416 TNRC6CQ9HCJ0 1690 aaKnown RBP2.37□□□□□ -2.03
PRDM4-204ENST00000549416 PLXNA3P51805 1871 aa2.37□□□□□ -2.03
PRDM4-204ENST00000549416 WDR90Q96KV7 1748 aa2.37□□□□□ -2.03
PRDM4-204ENST00000549416 DLEC1Q9Y238 1755 aa2.36□□□□□ -2.03
PRDM4-204ENST00000549416 SCN4AP35499 1836 aa2.36□□□□□ -2.03
PRDM4-204ENST00000549416 TRBV25-1A0A075B6N4 114 aa2.36□□□□□ -2.03
PRDM4-204ENST00000549416 FXYD6-FXYD2A0A087WZ82 144 aa2.36□□□□□ -2.03
PRDM4-204ENST00000549416 SNRPGP15A8MWD9 76 aa2.36□□□□□ -2.03
PRDM4-204ENST00000549416 ODF3BA8MYP8 253 aa2.36□□□□□ -2.03
PRDM4-204ENST00000549416 FAM223AQ8IWN6 122 aa2.36□□□□□ -2.03
PRDM4-204ENST00000549416 FXYD6Q9H0Q3 95 aa2.36□□□□□ -2.03
PRDM4-204ENST00000549416 C22orf24Q9Y442 160 aa2.36□□□□□ -2.03
PRDM4-204ENST00000549416 MINOS1-NBL1R4GNA1 71 aa2.36□□□□□ -2.03
PRDM4-204ENST00000549416 NHSQ6T4R5 1651 aa2.36□□□□□ -2.03
PRDM4-204ENST00000549416 CCDC88CQ9P219 2028 aa2.35□□□□□ -2.03
PRDM4-204ENST00000549416 TRAV12-3A0A0B4J271 114 aa2.35□□□□□ -2.03
PRDM4-204ENST00000549416 TRAV22A0A0B4J277 110 aa2.35□□□□□ -2.03
PRDM4-204ENST00000549416 A0A1B0GWA3 101 aa2.35□□□□□ -2.03
PRDM4-204ENST00000549416 FXYD1O00168 92 aa2.35□□□□□ -2.03
PRDM4-204ENST00000549416 C3orf79P0CE67 100 aa2.35□□□□□ -2.03
PRDM4-204ENST00000549416 GCHFRP30047 84 aa2.35□□□□□ -2.03
PRDM4-204ENST00000549416 DEFB121Q5J5C9 76 aa2.35□□□□□ -2.03
PRDM4-204ENST00000549416 C10orf128Q5T292 105 aa2.35□□□□□ -2.03
PRDM4-204ENST00000549416 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.35□□□□□ -2.03
PRDM4-204ENST00000549416 IGKV3D-11A0A0A0MRZ8 115 aa2.34□□□□□ -2.03
PRDM4-204ENST00000549416 TRAV12-1A0A0B4J245 112 aa2.34□□□□□ -2.03
PRDM4-204ENST00000549416 MYMXA0A1B0GTQ4 84 aa2.34□□□□□ -2.03
PRDM4-204ENST00000549416 TMEM30CPA0ZSE6 113 aa2.34□□□□□ -2.03
PRDM4-204ENST00000549416 SDHAF1A6NFY7 115 aa2.34□□□□□ -2.03
PRDM4-204ENST00000549416 CHKB-CPT1BH3BT56 60 aa2.34□□□□□ -2.03
PRDM4-204ENST00000549416 PLGLAQ15195 96 aa2.34□□□□□ -2.03
PRDM4-204ENST00000549416 DEFB113Q30KQ7 82 aa2.34□□□□□ -2.03
PRDM4-204ENST00000549416 PYDC2Q56P42 97 aa2.34□□□□□ -2.03
PRDM4-204ENST00000549416 KPRPQ5T749 579 aaPredicted RBP2.34□□□□□ -2.03
PRDM4-204ENST00000549416 KRTAP5-2Q701N4 177 aa2.34□□□□□ -2.03
PRDM4-204ENST00000549416 C20orf197Q8N268 126 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms