RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 RAB4BP61018 213 aa10.94□□□□□ -0.66
SSH1-208ENST00000548522 TDRG1Q3Y452 100 aa10.94□□□□□ -0.66
SSH1-208ENST00000548522 BAGE3Q86Y29 109 aa10.93□□□□□ -0.66
SSH1-208ENST00000548522 LINC00528Q8N1L1 170 aa10.93□□□□□ -0.66
SSH1-208ENST00000548522 SLC25A29Q8N8R3 303 aa10.93□□□□□ -0.66
SSH1-208ENST00000548522 PGLYRP4Q96LB8 373 aa10.93□□□□□ -0.66
SSH1-208ENST00000548522 F2Z2F3 143 aa10.92□□□□□ -0.66
SSH1-208ENST00000548522 LECT2O14960 151 aa10.92□□□□□ -0.66
SSH1-208ENST00000548522 IGLC6P0CF74 106 aa10.92□□□□□ -0.66
SSH1-208ENST00000548522 PDZD11Q5EBL8 140 aa10.92□□□□□ -0.66
SSH1-208ENST00000548522 Q6ZSA8 131 aa10.92□□□□□ -0.66
SSH1-208ENST00000548522 ALKBH7Q9BT30 221 aaPredicted RBP10.92□□□□□ -0.66
SSH1-208ENST00000548522 IGHV3-73A0A0B4J1V6 119 aa10.91□□□□□ -0.66
SSH1-208ENST00000548522 SERF1AO75920 110 aa10.91□□□□□ -0.66
SSH1-208ENST00000548522 LINC00310P59036 64 aa10.91□□□□□ -0.66
SSH1-208ENST00000548522 LINC01620Q4KN68 170 aa10.91□□□□□ -0.66
SSH1-208ENST00000548522 SH2D6Q7Z4S9 175 aa10.91□□□□□ -0.66
SSH1-208ENST00000548522 C18orf32Q8TCD1 76 aa10.91□□□□□ -0.66
SSH1-208ENST00000548522 KCNS1Q96KK3 526 aa10.91□□□□□ -0.66
SSH1-208ENST00000548522 NIT2Q9NQR4 276 aa10.91□□□□□ -0.66
SSH1-208ENST00000548522 TRAV8-6A0A0B4J262 113 aa10.9□□□□□ -0.66
SSH1-208ENST00000548522 GRIFINA4D1Z8 144 aa10.9□□□□□ -0.66
SSH1-208ENST00000548522 KRTAP29-1A8MX34 341 aaPredicted RBP10.9□□□□□ -0.66
SSH1-208ENST00000548522 CAMPP49913 170 aa10.9□□□□□ -0.66
SSH1-208ENST00000548522 RAB4AP20338 218 aa10.89□□□□□ -0.67
SSH1-208ENST00000548522 ZNF80P51504 273 aaPredicted RBP10.89□□□□□ -0.67
SSH1-208ENST00000548522 CFAP126Q5VTH2 177 aa10.89□□□□□ -0.67
SSH1-208ENST00000548522 FER1L6-AS1Q8NA97 138 aa10.89□□□□□ -0.67
SSH1-208ENST00000548522 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.88□□□□□ -0.67
SSH1-208ENST00000548522 TRAV21A0A0B4J279 112 aa10.88□□□□□ -0.67
SSH1-208ENST00000548522 PLA2G1BP04054 148 aaKnown RBP10.88□□□□□ -0.67
SSH1-208ENST00000548522 ARMS2P0C7Q2 107 aa10.88□□□□□ -0.67
SSH1-208ENST00000548522 IQCJQ1A5X6 159 aa10.88□□□□□ -0.67
SSH1-208ENST00000548522 LELP1Q5T871 98 aa10.88□□□□□ -0.67
SSH1-208ENST00000548522 CHCHD1Q96BP2 118 aaKnown RBP10.88□□□□□ -0.67
SSH1-208ENST00000548522 C11orf21Q9P2W6 132 aa10.88□□□□□ -0.67
SSH1-208ENST00000548522 RS1O15537 224 aa10.87□□□□□ -0.67
SSH1-208ENST00000548522 GZMBP10144 247 aa10.87□□□□□ -0.67
SSH1-208ENST00000548522 PMCHP20382 165 aa10.87□□□□□ -0.67
SSH1-208ENST00000548522 RHOHQ15669 191 aa10.87□□□□□ -0.67
SSH1-208ENST00000548522 KIAA1644Q3SXP7 199 aa10.87□□□□□ -0.67
SSH1-208ENST00000548522 ZNF876PQ49A33 203 aa10.87□□□□□ -0.67
SSH1-208ENST00000548522 PKHD1L1Q86WI1 4243 aa10.87□□□□□ -0.67
SSH1-208ENST00000548522 OR5AL1P0C617 328 aa10.86□□□□□ -0.67
SSH1-208ENST00000548522 LAGE3Q14657 143 aa10.86□□□□□ -0.67
SSH1-208ENST00000548522 LYZL1Q6UWQ5 148 aa10.86□□□□□ -0.67
SSH1-208ENST00000548522 SCXQ7RTU7 201 aa10.86□□□□□ -0.67
SSH1-208ENST00000548522 PRADC1Q9BSG0 188 aa10.86□□□□□ -0.67
SSH1-208ENST00000548522 SSBP4Q9BWG4 385 aaPredicted RBP10.86□□□□□ -0.67
SSH1-208ENST00000548522 SAMD10Q9BYL1 202 aa10.86□□□□□ -0.67
SSH1-208ENST00000548522 TRBV6-4A0A1B0GX49 114 aa10.85□□□□□ -0.67
SSH1-208ENST00000548522 SNAI2O43623 268 aa10.85□□□□□ -0.67
SSH1-208ENST00000548522 NUPR1O60356 82 aa10.85□□□□□ -0.67
SSH1-208ENST00000548522 KRTAP10-4P60372 401 aaPredicted RBP10.85□□□□□ -0.67
SSH1-208ENST00000548522 DEFB104AQ8WTQ1 72 aa10.85□□□□□ -0.67
SSH1-208ENST00000548522 TMEM191AQ9H0A3 160 aa10.85□□□□□ -0.67
SSH1-208ENST00000548522 GTSF1LQ9H1H1 148 aa10.85□□□□□ -0.67
SSH1-208ENST00000548522 LAMTOR2Q9Y2Q5 125 aa10.85□□□□□ -0.67
SSH1-208ENST00000548522 PPBPP02775 128 aa10.84□□□□□ -0.67
SSH1-208ENST00000548522 CACNG7P62955 275 aa10.84□□□□□ -0.67
SSH1-208ENST00000548522 FAM104BQ5XKR9 115 aa10.84□□□□□ -0.67
SSH1-208ENST00000548522 DAZ4Q86SG3 579 aaKnown RBP10.84□□□□□ -0.67
SSH1-208ENST00000548522 ATP6V0E2Q8NHE4 81 aa10.84□□□□□ -0.67
SSH1-208ENST00000548522 DNAJC30Q96LL9 226 aa10.84□□□□□ -0.67
SSH1-208ENST00000548522 DAZ3Q9NR90 486 aaKnown RBP10.84□□□□□ -0.67
SSH1-208ENST00000548522 Q9UF83 564 aa10.84□□□□□ -0.67
SSH1-208ENST00000548522 IGKV3D-20A0A0C4DH25 116 aa10.83□□□□□ -0.68
SSH1-208ENST00000548522 BAALCQ8WXS3 180 aa10.83□□□□□ -0.68
SSH1-208ENST00000548522 C9orf85Q96MD7 179 aa10.83□□□□□ -0.68
SSH1-208ENST00000548522 TM2D2Q9BX73 214 aa10.83□□□□□ -0.68
SSH1-208ENST00000548522 HSBP1O75506 76 aa10.82□□□□□ -0.68
SSH1-208ENST00000548522 LINC00694P0DN24 101 aa10.82□□□□□ -0.68
SSH1-208ENST00000548522 AMTP48728 403 aa10.82□□□□□ -0.68
SSH1-208ENST00000548522 GAGE12JA6NER3 117 aa10.81□□□□□ -0.68
SSH1-208ENST00000548522 RNASE3P12724 160 aaKnown RBP10.81□□□□□ -0.68
SSH1-208ENST00000548522 GAGE1Q13065 139 aa10.81□□□□□ -0.68
SSH1-208ENST00000548522 GAGE4Q13068 117 aa10.81□□□□□ -0.68
SSH1-208ENST00000548522 GAGE5Q13069 117 aa10.81□□□□□ -0.68
SSH1-208ENST00000548522 GAGE13Q4V321 117 aa10.81□□□□□ -0.68
SSH1-208ENST00000548522 PKIAP61925 76 aa10.8□□□□□ -0.68
SSH1-208ENST00000548522 ORMDL3Q8N138 153 aa10.8□□□□□ -0.68
SSH1-208ENST00000548522 TMSB15BA0A087X1C1 80 aa10.79□□□□□ -0.68
SSH1-208ENST00000548522 TRAV8-3A0A0A6YYJ7 113 aa10.79□□□□□ -0.68
SSH1-208ENST00000548522 LINC00614P0C842 121 aa10.79□□□□□ -0.68
SSH1-208ENST00000548522 NIT1Q86X76 327 aa10.79□□□□□ -0.68
SSH1-208ENST00000548522 TPPP3Q9BW30 176 aa10.79□□□□□ -0.68
SSH1-208ENST00000548522 TSTD3H0UI37 97 aa10.78□□□□□ -0.68
SSH1-208ENST00000548522 NTF3P20783 257 aa10.78□□□□□ -0.68
SSH1-208ENST00000548522 TWIST1Q15672 202 aa10.78□□□□□ -0.68
SSH1-208ENST00000548522 TEX43Q6ZNM6 134 aa10.78□□□□□ -0.68
SSH1-208ENST00000548522 SMIM15Q7Z3B0 74 aa10.78□□□□□ -0.68
SSH1-208ENST00000548522 URB1-AS1Q96HZ7 61 aa10.78□□□□□ -0.68
SSH1-208ENST00000548522 CHAC1Q9BUX1 264 aa10.78□□□□□ -0.68
SSH1-208ENST00000548522 CIDEAO60543 219 aa10.77□□□□□ -0.69
SSH1-208ENST00000548522 SERTAD4-AS1Q5TG53 156 aa10.77□□□□□ -0.69
SSH1-208ENST00000548522 C14orf178Q8N769 122 aaPredicted RBP10.77□□□□□ -0.69
SSH1-208ENST00000548522 CIRBP-AS1Q8TBR5 109 aa10.77□□□□□ -0.69
SSH1-208ENST00000548522 JPT2Q9H910 190 aa10.77□□□□□ -0.69
SSH1-208ENST00000548522 LINC01546A6NGU7 62 aa10.76□□□□□ -0.69
SSH1-208ENST00000548522 PCP4L1A6NKN8 68 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms