RNA–Protein interactions for RNA: ENST00000548357.2

SNX29P1-201, Transcript of sorting nexin 29 pseudogene 1, humanhuman

BASIC

Gene SNX29P1, Length 1,007 nt, Biotype unprocessed pseudogene, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29P1-201ENST00000548357 IGKV3OR2-268A0A0C4DH90 116 aa9.62□□□□□ -0.87
SNX29P1-201ENST00000548357 H7C1H1 209 aa9.62□□□□□ -0.87
SNX29P1-201ENST00000548357 P01737 135 aa9.62□□□□□ -0.87
SNX29P1-201ENST00000548357 CTRLP40313 264 aa9.62□□□□□ -0.87
SNX29P1-201ENST00000548357 PGLYRP4Q96LB8 373 aa9.62□□□□□ -0.87
SNX29P1-201ENST00000548357 NIT2Q9NQR4 276 aa9.62□□□□□ -0.87
SNX29P1-201ENST00000548357 IGHV3-64A0A075B6Q5 118 aa9.61□□□□□ -0.87
SNX29P1-201ENST00000548357 TRAV8-4A0A0B4J246 113 aa9.61□□□□□ -0.87
SNX29P1-201ENST00000548357 GAGE12HA6NDE8 117 aa9.61□□□□□ -0.87
SNX29P1-201ENST00000548357 K7EN84 100 aa9.61□□□□□ -0.87
SNX29P1-201ENST00000548357 FOXA3P55318 350 aaPredicted RBP9.61□□□□□ -0.87
SNX29P1-201ENST00000548357 MEF2BQ02080 365 aaPredicted RBP9.61□□□□□ -0.87
SNX29P1-201ENST00000548357 HIGD2BQ4VC39 106 aa9.61□□□□□ -0.87
SNX29P1-201ENST00000548357 GATD1Q8NB37 220 aa9.61□□□□□ -0.87
SNX29P1-201ENST00000548357 NUDT10Q8NFP7 164 aa9.61□□□□□ -0.87
SNX29P1-201ENST00000548357 RPL39LQ96EH5 51 aaKnown RBP9.61□□□□□ -0.87
SNX29P1-201ENST00000548357 NUDT11Q96G61 164 aa9.61□□□□□ -0.87
SNX29P1-201ENST00000548357 PHOX2AO14813 284 aa9.6□□□□□ -0.87
SNX29P1-201ENST00000548357 IFNA1P01562 189 aa9.6□□□□□ -0.87
SNX29P1-201ENST00000548357 AMTP48728 403 aa9.6□□□□□ -0.87
SNX29P1-201ENST00000548357 SULT1A2P50226 295 aa9.6□□□□□ -0.87
SNX29P1-201ENST00000548357 RNASE7Q9H1E1 156 aaKnown RBP9.6□□□□□ -0.87
SNX29P1-201ENST00000548357 MED9Q9NWA0 146 aa9.6□□□□□ -0.87
SNX29P1-201ENST00000548357 TRGC1P0CF51 173 aa9.59□□□□□ -0.87
SNX29P1-201ENST00000548357 BCL2P10415 239 aa9.59□□□□□ -0.87
SNX29P1-201ENST00000548357 COTL1Q14019 142 aa9.59□□□□□ -0.87
SNX29P1-201ENST00000548357 RNF213Q63HN8 5207 aa9.58□□□□□ -0.88
SNX29P1-201ENST00000548357 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.58□□□□□ -0.88
SNX29P1-201ENST00000548357 IGKV2-29A2NJV5 120 aaPredicted RBP9.58□□□□□ -0.88
SNX29P1-201ENST00000548357 F2Z2F3 143 aa9.58□□□□□ -0.88
SNX29P1-201ENST00000548357 UBE2L6O14933 153 aa9.58□□□□□ -0.88
SNX29P1-201ENST00000548357 EIF5AP63241 154 aaKnown RBP9.58□□□□□ -0.88
SNX29P1-201ENST00000548357 COX6A2Q02221 97 aa9.58□□□□□ -0.88
SNX29P1-201ENST00000548357 Q6ZRU5 148 aa9.58□□□□□ -0.88
SNX29P1-201ENST00000548357 C9orf62Q8N4C0 152 aa9.58□□□□□ -0.88
SNX29P1-201ENST00000548357 PRSS3P2Q8NHM4 247 aa9.58□□□□□ -0.88
SNX29P1-201ENST00000548357 GTSF1Q8WW33 167 aa9.58□□□□□ -0.88
SNX29P1-201ENST00000548357 SMIM12Q96EX1 92 aa9.58□□□□□ -0.88
SNX29P1-201ENST00000548357 CNFNQ9BYD5 112 aa9.58□□□□□ -0.88
SNX29P1-201ENST00000548357 PLAC8Q9NZF1 115 aa9.58□□□□□ -0.88
SNX29P1-201ENST00000548357 GAS8-AS1O95177 125 aa9.57□□□□□ -0.88
SNX29P1-201ENST00000548357 TWIST1Q15672 202 aa9.57□□□□□ -0.88
SNX29P1-201ENST00000548357 AP5S1Q9NUS5 200 aa9.57□□□□□ -0.88
SNX29P1-201ENST00000548357 PDE6DO43924 150 aa9.56□□□□□ -0.88
SNX29P1-201ENST00000548357 OCC1Q8TAD7 63 aa9.56□□□□□ -0.88
SNX29P1-201ENST00000548357 CHCHD10Q8WYQ3 142 aaPredicted RBP9.56□□□□□ -0.88
SNX29P1-201ENST00000548357 DPH3Q96FX2 82 aa9.56□□□□□ -0.88
SNX29P1-201ENST00000548357 RPP21Q9H633 154 aaKnown RBP9.56□□□□□ -0.88
SNX29P1-201ENST00000548357 IGKV2-24A0A0C4DH68 120 aa9.55□□□□□ -0.88
SNX29P1-201ENST00000548357 XKRY2A2RUG3 117 aa9.55□□□□□ -0.88
SNX29P1-201ENST00000548357 WDR73Q6P4I2 378 aa9.55□□□□□ -0.88
SNX29P1-201ENST00000548357 LINC00526Q96FQ7 95 aa9.55□□□□□ -0.88
SNX29P1-201ENST00000548357 RNF185Q96GF1 192 aa9.55□□□□□ -0.88
SNX29P1-201ENST00000548357 A0A096LNI7 61 aa9.54□□□□□ -0.88
SNX29P1-201ENST00000548357 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.54□□□□□ -0.88
SNX29P1-201ENST00000548357 FOXI1Q12951 378 aa9.54□□□□□ -0.88
SNX29P1-201ENST00000548357 FAM231BA6NCW3 169 aa9.53□□□□□ -0.88
SNX29P1-201ENST00000548357 RPS10P46783 165 aaKnown RBP9.53□□□□□ -0.88
SNX29P1-201ENST00000548357 MAJINQ3KP22 176 aa9.53□□□□□ -0.88
SNX29P1-201ENST00000548357 FAM210AQ96ND0 272 aa9.53□□□□□ -0.88
SNX29P1-201ENST00000548357 GVQW2A0A096LPI5 108 aaPredicted RBP9.52□□□□□ -0.89
SNX29P1-201ENST00000548357 FGF6P10767 208 aa9.52□□□□□ -0.89
SNX29P1-201ENST00000548357 PRR3P79522 188 aaKnown RBP9.52□□□□□ -0.89
SNX29P1-201ENST00000548357 RNASEKQ6P5S7 137 aaKnown RBP9.52□□□□□ -0.89
SNX29P1-201ENST00000548357 LYPD6BQ8NI32 183 aa9.52□□□□□ -0.89
SNX29P1-201ENST00000548357 SDHAF1A6NFY7 115 aa9.51□□□□□ -0.89
SNX29P1-201ENST00000548357 NDUFS6O75380 124 aaKnown RBP9.51□□□□□ -0.89
SNX29P1-201ENST00000548357 APCSP02743 223 aa9.51□□□□□ -0.89
SNX29P1-201ENST00000548357 AMMECR1LQ6DCA0 310 aa9.51□□□□□ -0.89
SNX29P1-201ENST00000548357 TEX46H3BTG2 121 aa9.5□□□□□ -0.89
SNX29P1-201ENST00000548357 STPG4Q8N801 248 aa9.5□□□□□ -0.89
SNX29P1-201ENST00000548357 BIN3Q9NQY0 253 aa9.5□□□□□ -0.89
SNX29P1-201ENST00000548357 NCR2O95944 276 aa9.49□□□□□ -0.89
SNX29P1-201ENST00000548357 TSHBP01222 138 aa9.49□□□□□ -0.89
SNX29P1-201ENST00000548357 XCL1P47992 114 aa9.49□□□□□ -0.89
SNX29P1-201ENST00000548357 EIF5AL1Q6IS14 154 aaKnown RBP9.49□□□□□ -0.89
SNX29P1-201ENST00000548357 CFAP161Q6P656 301 aa9.49□□□□□ -0.89
SNX29P1-201ENST00000548357 TMEM242Q9NWH2 141 aa9.49□□□□□ -0.89
SNX29P1-201ENST00000548357 LINC00959A0A1B0GUT2 108 aa9.48□□□□□ -0.89
SNX29P1-201ENST00000548357 CCL25O15444 150 aa9.48□□□□□ -0.89
SNX29P1-201ENST00000548357 ESDP10768 282 aa9.48□□□□□ -0.89
SNX29P1-201ENST00000548357 SLC51BQ86UW2 128 aa9.48□□□□□ -0.89
SNX29P1-201ENST00000548357 TCTE3Q8IZS6 198 aa9.48□□□□□ -0.89
SNX29P1-201ENST00000548357 OR5A1Q8NGJ0 315 aa9.48□□□□□ -0.89
SNX29P1-201ENST00000548357 C7orf33Q8WU49 177 aa9.48□□□□□ -0.89
SNX29P1-201ENST00000548357 GATCO43716 136 aaKnown RBP9.47□□□□□ -0.89
SNX29P1-201ENST00000548357 TRBV6-5A0A0K0K1A5 114 aa9.46□□□□□ -0.9
SNX29P1-201ENST00000548357 H7C423 109 aa9.46□□□□□ -0.9
SNX29P1-201ENST00000548357 LINC01600Q96MT4 127 aa9.46□□□□□ -0.9
SNX29P1-201ENST00000548357 I3L3M4 83 aa9.45□□□□□ -0.9
SNX29P1-201ENST00000548357 PMCHP20382 165 aa9.45□□□□□ -0.9
SNX29P1-201ENST00000548357 FAM231DQ6ZW35 169 aa9.45□□□□□ -0.9
SNX29P1-201ENST00000548357 SMKR1H3BMG3 65 aa9.44□□□□□ -0.9
SNX29P1-201ENST00000548357 ZNF25P17030 456 aaPredicted RBP9.44□□□□□ -0.9
SNX29P1-201ENST00000548357 ALKAL2Q6UX46 152 aa9.44□□□□□ -0.9
SNX29P1-201ENST00000548357 CARD19Q96LW7 228 aa9.44□□□□□ -0.9
SNX29P1-201ENST00000548357 LPAP08519 4548 aa9.43□□□□□ -0.9
SNX29P1-201ENST00000548357 CEBPGP53567 150 aa9.43□□□□□ -0.9
SNX29P1-201ENST00000548357 POLR2KP53803 58 aaKnown RBP9.43□□□□□ -0.9
SNX29P1-201ENST00000548357 RNASE13Q5GAN3 156 aaKnown RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms