RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 NUDT10Q8NFP7 164 aa7.6□□□□□ -1.19
TRAFD1-205ENST00000548277 NUDT11Q96G61 164 aa7.6□□□□□ -1.19
TRAFD1-205ENST00000548277 IGHV3-64A0A075B6Q5 118 aa7.59□□□□□ -1.19
TRAFD1-205ENST00000548277 IGHV1-24A0A0C4DH33 117 aa7.59□□□□□ -1.19
TRAFD1-205ENST00000548277 SLPIP03973 132 aa7.59□□□□□ -1.19
TRAFD1-205ENST00000548277 TRGC1P0CF51 173 aa7.59□□□□□ -1.19
TRAFD1-205ENST00000548277 NKX2-5P52952 324 aaPredicted RBP7.59□□□□□ -1.19
TRAFD1-205ENST00000548277 Q6ZNX1 250 aa7.59□□□□□ -1.19
TRAFD1-205ENST00000548277 AP5S1Q9NUS5 200 aa7.59□□□□□ -1.19
TRAFD1-205ENST00000548277 IGLV4-60A0A075B6I1 120 aa7.58□□□□□ -1.2
TRAFD1-205ENST00000548277 IGKV3OR2-268A0A0C4DH90 116 aa7.58□□□□□ -1.2
TRAFD1-205ENST00000548277 PHOX2AO14813 284 aa7.58□□□□□ -1.2
TRAFD1-205ENST00000548277 TAGLN2P37802 199 aaKnown RBP7.58□□□□□ -1.2
TRAFD1-205ENST00000548277 IQCJQ1A5X6 159 aa7.58□□□□□ -1.2
TRAFD1-205ENST00000548277 RASL11AQ6T310 242 aa7.58□□□□□ -1.2
TRAFD1-205ENST00000548277 C9orf62Q8N4C0 152 aa7.58□□□□□ -1.2
TRAFD1-205ENST00000548277 C20orf203Q8NBC4 194 aa7.58□□□□□ -1.2
TRAFD1-205ENST00000548277 OCC1Q8TAD7 63 aa7.58□□□□□ -1.2
TRAFD1-205ENST00000548277 GFRA4Q9GZZ7 299 aa7.58□□□□□ -1.2
TRAFD1-205ENST00000548277 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.57□□□□□ -1.2
TRAFD1-205ENST00000548277 WDR73Q6P4I2 378 aa7.57□□□□□ -1.2
TRAFD1-205ENST00000548277 LYPD6BQ8NI32 183 aa7.57□□□□□ -1.2
TRAFD1-205ENST00000548277 GTSF1Q8WW33 167 aa7.57□□□□□ -1.2
TRAFD1-205ENST00000548277 RNASE7Q9H1E1 156 aaKnown RBP7.57□□□□□ -1.2
TRAFD1-205ENST00000548277 NIT2Q9NQR4 276 aa7.57□□□□□ -1.2
TRAFD1-205ENST00000548277 hCG_2014768A0A024R1R8 64 aa7.56□□□□□ -1.2
TRAFD1-205ENST00000548277 K7EN84 100 aa7.56□□□□□ -1.2
TRAFD1-205ENST00000548277 CTRLP40313 264 aa7.56□□□□□ -1.2
TRAFD1-205ENST00000548277 CNBPP62633 177 aaKnown RBP7.56□□□□□ -1.2
TRAFD1-205ENST00000548277 CIRBPQ14011 172 aaKnown RBP7.56□□□□□ -1.2
TRAFD1-205ENST00000548277 TWIST1Q15672 202 aa7.56□□□□□ -1.2
TRAFD1-205ENST00000548277 AKAP14Q86UN6 197 aa7.56□□□□□ -1.2
TRAFD1-205ENST00000548277 TMEM243Q9BU79 118 aa7.56□□□□□ -1.2
TRAFD1-205ENST00000548277 RPP21Q9H633 154 aaKnown RBP7.56□□□□□ -1.2
TRAFD1-205ENST00000548277 IGKV2-24A0A0C4DH68 120 aa7.55□□□□□ -1.2
TRAFD1-205ENST00000548277 BLOC1S1P78537 153 aa7.55□□□□□ -1.2
TRAFD1-205ENST00000548277 COX6A2Q02221 97 aa7.55□□□□□ -1.2
TRAFD1-205ENST00000548277 MAJINQ3KP22 176 aa7.55□□□□□ -1.2
TRAFD1-205ENST00000548277 HIGD2BQ4VC39 106 aa7.55□□□□□ -1.2
TRAFD1-205ENST00000548277 ALKAL2Q6UX46 152 aa7.55□□□□□ -1.2
TRAFD1-205ENST00000548277 SPACA4Q8TDM5 124 aa7.55□□□□□ -1.2
TRAFD1-205ENST00000548277 TRAV8-4A0A0B4J246 113 aa7.54□□□□□ -1.2
TRAFD1-205ENST00000548277 A0A1B0GUV1 79 aa7.54□□□□□ -1.2
TRAFD1-205ENST00000548277 GAGE12HA6NDE8 117 aa7.54□□□□□ -1.2
TRAFD1-205ENST00000548277 UBE2L6O14933 153 aa7.54□□□□□ -1.2
TRAFD1-205ENST00000548277 GATD1Q8NB37 220 aa7.54□□□□□ -1.2
TRAFD1-205ENST00000548277 PRSS3P2Q8NHM4 247 aa7.54□□□□□ -1.2
TRAFD1-205ENST00000548277 C7orf33Q8WU49 177 aa7.54□□□□□ -1.2
TRAFD1-205ENST00000548277 PGLYRP4Q96LB8 373 aa7.54□□□□□ -1.2
TRAFD1-205ENST00000548277 CNFNQ9BYD5 112 aa7.54□□□□□ -1.2
TRAFD1-205ENST00000548277 LRP2P98164 4655 aa7.54□□□□□ -1.2
TRAFD1-205ENST00000548277 TRAV26-2A0A0B4J265 109 aa7.53□□□□□ -1.2
TRAFD1-205ENST00000548277 GATCO43716 136 aaKnown RBP7.53□□□□□ -1.2
TRAFD1-205ENST00000548277 COTL1Q14019 142 aa7.53□□□□□ -1.2
TRAFD1-205ENST00000548277 RNF185Q96GF1 192 aa7.53□□□□□ -1.2
TRAFD1-205ENST00000548277 PLAC8Q9NZF1 115 aa7.53□□□□□ -1.2
TRAFD1-205ENST00000548277 TMEM250H0YL14 139 aa7.52□□□□□ -1.21
TRAFD1-205ENST00000548277 AMTP48728 403 aa7.52□□□□□ -1.21
TRAFD1-205ENST00000548277 CEBPGP53567 150 aa7.52□□□□□ -1.21
TRAFD1-205ENST00000548277 FOXA3P55318 350 aaPredicted RBP7.52□□□□□ -1.21
TRAFD1-205ENST00000548277 STPG4Q8N801 248 aa7.52□□□□□ -1.21
TRAFD1-205ENST00000548277 A8MWL6 223 aa7.51□□□□□ -1.21
TRAFD1-205ENST00000548277 RPS10P46783 165 aaKnown RBP7.51□□□□□ -1.21
TRAFD1-205ENST00000548277 SMIM15Q7Z3B0 74 aa7.51□□□□□ -1.21
TRAFD1-205ENST00000548277 C15orf56Q8N910 161 aa7.51□□□□□ -1.21
TRAFD1-205ENST00000548277 RPL39LQ96EH5 51 aaKnown RBP7.51□□□□□ -1.21
TRAFD1-205ENST00000548277 LINC01600Q96MT4 127 aa7.51□□□□□ -1.21
TRAFD1-205ENST00000548277 NDUFS6O75380 124 aaKnown RBP7.5□□□□□ -1.21
TRAFD1-205ENST00000548277 CFAP161Q6P656 301 aa7.5□□□□□ -1.21
TRAFD1-205ENST00000548277 FAM231DQ6ZW35 169 aa7.5□□□□□ -1.21
TRAFD1-205ENST00000548277 EIF5A2Q9GZV4 153 aaKnown RBP7.5□□□□□ -1.21
TRAFD1-205ENST00000548277 TNXBP22105 4242 aa7.5□□□□□ -1.21
TRAFD1-205ENST00000548277 RNF213Q63HN8 5207 aa7.49□□□□□ -1.21
TRAFD1-205ENST00000548277 PRR3P79522 188 aaKnown RBP7.49□□□□□ -1.21
TRAFD1-205ENST00000548277 SDHAF1A6NFY7 115 aa7.48□□□□□ -1.21
TRAFD1-205ENST00000548277 AMMECR1LQ6DCA0 310 aa7.48□□□□□ -1.21
TRAFD1-205ENST00000548277 RNASEKQ6P5S7 137 aaKnown RBP7.48□□□□□ -1.21
TRAFD1-205ENST00000548277 TEX261Q6UWH6 196 aa7.48□□□□□ -1.21
TRAFD1-205ENST00000548277 LINC00526Q96FQ7 95 aa7.48□□□□□ -1.21
TRAFD1-205ENST00000548277 SMIM7Q9BQ49 75 aa7.48□□□□□ -1.21
TRAFD1-205ENST00000548277 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.47□□□□□ -1.21
TRAFD1-205ENST00000548277 A0A096LNI7 61 aa7.47□□□□□ -1.21
TRAFD1-205ENST00000548277 IGKV2-29A2NJV5 120 aaPredicted RBP7.47□□□□□ -1.21
TRAFD1-205ENST00000548277 NCR2O95944 276 aa7.47□□□□□ -1.21
TRAFD1-205ENST00000548277 APCSP02743 223 aa7.47□□□□□ -1.21
TRAFD1-205ENST00000548277 CT83Q5H943 113 aa7.47□□□□□ -1.21
TRAFD1-205ENST00000548277 CHCHD10Q8WYQ3 142 aaPredicted RBP7.47□□□□□ -1.21
TRAFD1-205ENST00000548277 A0A0J9YXV3 536 aa7.46□□□□□ -1.22
TRAFD1-205ENST00000548277 ZNF727A8MUV8 499 aa7.46□□□□□ -1.22
TRAFD1-205ENST00000548277 GAS8-AS1O95177 125 aa7.46□□□□□ -1.22
TRAFD1-205ENST00000548277 PMCHP20382 165 aa7.46□□□□□ -1.22
TRAFD1-205ENST00000548277 LINC01551Q86U37 167 aa7.46□□□□□ -1.22
TRAFD1-205ENST00000548277 BORCS7Q96B45 105 aa7.46□□□□□ -1.22
TRAFD1-205ENST00000548277 FAM210AQ96ND0 272 aa7.46□□□□□ -1.22
TRAFD1-205ENST00000548277 A0A1B0GUT8 65 aa7.45□□□□□ -1.22
TRAFD1-205ENST00000548277 FAM231BA6NCW3 169 aa7.45□□□□□ -1.22
TRAFD1-205ENST00000548277 HIGD1CA8MV81 97 aa7.45□□□□□ -1.22
TRAFD1-205ENST00000548277 H7C423 109 aa7.45□□□□□ -1.22
TRAFD1-205ENST00000548277 I3L3M4 83 aa7.45□□□□□ -1.22
TRAFD1-205ENST00000548277 SRP19P09132 144 aaKnown RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms