RNA–Protein interactions for RNA: ENST00000548097.5

KRT4-201, Transcript of keratin 4, humanhuman

TSL 1 (best)

Gene KRT4, Length 1,839 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4-201ENST00000548097 TRBV6-8A0A0A6YYG3 113 aa11.76□□□□□ -0.53
KRT4-201ENST00000548097 WFDC10BQ8IUB3 73 aa11.76□□□□□ -0.53
KRT4-201ENST00000548097 UBE2DNLQ8IWF7 75 aa11.76□□□□□ -0.53
KRT4-201ENST00000548097 PRSS3P2Q8NHM4 247 aa11.76□□□□□ -0.53
KRT4-201ENST00000548097 PRSS47A8MTI9 375 aa11.75□□□□□ -0.53
KRT4-201ENST00000548097 Q8N3U1 123 aa11.75□□□□□ -0.53
KRT4-201ENST00000548097 URB1-AS1Q96HZ7 61 aa11.75□□□□□ -0.53
KRT4-201ENST00000548097 KIR2DL4Q99706 377 aa11.75□□□□□ -0.53
KRT4-201ENST00000548097 FCER1GP30273 86 aa11.74□□□□□ -0.53
KRT4-201ENST00000548097 LELP1Q5T871 98 aa11.74□□□□□ -0.53
KRT4-201ENST00000548097 Q8N8P6 123 aa11.74□□□□□ -0.53
KRT4-201ENST00000548097 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.74□□□□□ -0.53
KRT4-201ENST00000548097 IGKV2-29A2NJV5 120 aaPredicted RBP11.74□□□□□ -0.53
KRT4-201ENST00000548097 AMTP48728 403 aa11.74□□□□□ -0.53
KRT4-201ENST00000548097 CHCHD7Q9BUK0 85 aa11.74□□□□□ -0.53
KRT4-201ENST00000548097 HIST1H2BKO60814 126 aa11.73□□□□□ -0.53
KRT4-201ENST00000548097 HIST1H2BJP06899 126 aa11.73□□□□□ -0.53
KRT4-201ENST00000548097 HIST1H2BOP23527 126 aa11.73□□□□□ -0.53
KRT4-201ENST00000548097 HIST1H2BBP33778 126 aa11.73□□□□□ -0.53
KRT4-201ENST00000548097 HIST1H2BDP58876 126 aa11.73□□□□□ -0.53
KRT4-201ENST00000548097 HIST1H2BCP62807 126 aa11.73□□□□□ -0.53
KRT4-201ENST00000548097 RPL32P62910 135 aaKnown RBP11.73□□□□□ -0.53
KRT4-201ENST00000548097 HIST2H2BEQ16778 126 aa11.73□□□□□ -0.53
KRT4-201ENST00000548097 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.73□□□□□ -0.53
KRT4-201ENST00000548097 HIST1H2BHQ93079 126 aa11.73□□□□□ -0.53
KRT4-201ENST00000548097 HIST1H2BNQ99877 126 aa11.73□□□□□ -0.53
KRT4-201ENST00000548097 HIST1H2BMQ99879 126 aa11.73□□□□□ -0.53
KRT4-201ENST00000548097 TRBV25-1A0A075B6N4 114 aa11.72□□□□□ -0.53
KRT4-201ENST00000548097 IGHV1-24A0A0C4DH33 117 aa11.72□□□□□ -0.53
KRT4-201ENST00000548097 NIT1Q86X76 327 aa11.72□□□□□ -0.53
KRT4-201ENST00000548097 CHCHD5Q9BSY4 110 aa11.72□□□□□ -0.53
KRT4-201ENST00000548097 DNAH1Q9P2D7 4330 aa11.72□□□□□ -0.53
KRT4-201ENST00000548097 LY6G6CO95867 125 aa11.72□□□□□ -0.53
KRT4-201ENST00000548097 GAGE6Q13070 117 aa11.72□□□□□ -0.53
KRT4-201ENST00000548097 NXT2Q9NPJ8 142 aaKnown RBP11.72□□□□□ -0.53
KRT4-201ENST00000548097 MRPS16Q9Y3D3 137 aaKnown RBP11.72□□□□□ -0.53
KRT4-201ENST00000548097 RNASEKQ6P5S7 137 aaKnown RBP11.71□□□□□ -0.54
KRT4-201ENST00000548097 TIRAPP58753 221 aa11.7□□□□□ -0.54
KRT4-201ENST00000548097 RPL39P62891 51 aaKnown RBP11.7□□□□□ -0.54
KRT4-201ENST00000548097 PMCHL1Q16048 86 aa11.7□□□□□ -0.54
KRT4-201ENST00000548097 FA2HQ7L5A8 372 aa11.7□□□□□ -0.54
KRT4-201ENST00000548097 TMEM243Q9BU79 118 aa11.7□□□□□ -0.54
KRT4-201ENST00000548097 TRAV8-6A0A0B4J262 113 aa11.7□□□□□ -0.54
KRT4-201ENST00000548097 TMEM262E9PQX1 116 aa11.7□□□□□ -0.54
KRT4-201ENST00000548097 ESDP10768 282 aa11.7□□□□□ -0.54
KRT4-201ENST00000548097 BAGE3Q86Y29 109 aa11.7□□□□□ -0.54
KRT4-201ENST00000548097 IGHV3-30P01768 117 aa11.69□□□□□ -0.54
KRT4-201ENST00000548097 IGHV3-33P01772 117 aa11.69□□□□□ -0.54
KRT4-201ENST00000548097 LINC00614P0C842 121 aa11.69□□□□□ -0.54
KRT4-201ENST00000548097 IGHV3-30-3P0DP02 117 aa11.69□□□□□ -0.54
KRT4-201ENST00000548097 IGHV3-30-5P0DP03 117 aa11.69□□□□□ -0.54
KRT4-201ENST00000548097 LAGE3Q14657 143 aa11.69□□□□□ -0.54
KRT4-201ENST00000548097 TMEM97Q5BJF2 176 aa11.69□□□□□ -0.54
KRT4-201ENST00000548097 LINC00476Q8WZB0 136 aa11.69□□□□□ -0.54
KRT4-201ENST00000548097 VPS13DQ5THJ4 4388 aa11.69□□□□□ -0.54
KRT4-201ENST00000548097 NUPR1O60356 82 aa11.68□□□□□ -0.54
KRT4-201ENST00000548097 LINC00310P59036 64 aa11.68□□□□□ -0.54
KRT4-201ENST00000548097 Q0VG73 95 aa11.68□□□□□ -0.54
KRT4-201ENST00000548097 LGALS9CQ6DKI2 356 aa11.68□□□□□ -0.54
KRT4-201ENST00000548097 Q8N976 141 aa11.68□□□□□ -0.54
KRT4-201ENST00000548097 Q9H8V8 135 aa11.68□□□□□ -0.54
KRT4-201ENST00000548097 KMT2AQ03164 3969 aa11.68□□□□□ -0.54
KRT4-201ENST00000548097 MPV17L2Q567V2 206 aa11.67□□□□□ -0.54
KRT4-201ENST00000548097 UPK3BQ9BT76 320 aa11.67□□□□□ -0.54
KRT4-201ENST00000548097 UBE2L6O14933 153 aa11.67□□□□□ -0.54
KRT4-201ENST00000548097 SIVA1O15304 175 aa11.67□□□□□ -0.54
KRT4-201ENST00000548097 SERF1AO75920 110 aa11.67□□□□□ -0.54
KRT4-201ENST00000548097 BTF3P20290 206 aaKnown RBP11.67□□□□□ -0.54
KRT4-201ENST00000548097 AP5S1Q9NUS5 200 aa11.67□□□□□ -0.54
KRT4-201ENST00000548097 ALMS1Q8TCU4 4167 aa11.66□□□□□ -0.54
KRT4-201ENST00000548097 LINC00587B1AMM8 73 aa11.66□□□□□ -0.54
KRT4-201ENST00000548097 S100A2P29034 98 aa11.66□□□□□ -0.54
KRT4-201ENST00000548097 C20orf203Q8NBC4 194 aa11.66□□□□□ -0.54
KRT4-201ENST00000548097 LINC01546A6NGU7 62 aa11.65□□□□□ -0.54
KRT4-201ENST00000548097 ORMDL2Q53FV1 153 aa11.65□□□□□ -0.54
KRT4-201ENST00000548097 FGF6P10767 208 aa11.65□□□□□ -0.55
KRT4-201ENST00000548097 NDUFA6P56556 154 aa11.65□□□□□ -0.55
KRT4-201ENST00000548097 HYDINQ4G0P3 5121 aa11.65□□□□□ -0.55
KRT4-201ENST00000548097 IGLV4-60A0A075B6I1 120 aa11.64□□□□□ -0.55
KRT4-201ENST00000548097 A0A087WX48 190 aa11.64□□□□□ -0.55
KRT4-201ENST00000548097 A0A096LNJ9 63 aa11.64□□□□□ -0.55
KRT4-201ENST00000548097 C2orf66Q6UXQ4 117 aa11.64□□□□□ -0.55
KRT4-201ENST00000548097 FAM19A2Q8N3H0 131 aa11.64□□□□□ -0.55
KRT4-201ENST00000548097 M0R2N4 97 aa11.63□□□□□ -0.55
KRT4-201ENST00000548097 RBX1P62877 108 aa11.63□□□□□ -0.55
KRT4-201ENST00000548097 OPRPNQ99935 248 aaPredicted RBP11.63□□□□□ -0.55
KRT4-201ENST00000548097 RNASE13Q5GAN3 156 aaKnown RBP11.63□□□□□ -0.55
KRT4-201ENST00000548097 AMMECR1LQ6DCA0 310 aa11.63□□□□□ -0.55
KRT4-201ENST00000548097 KRTAP1-5Q9BYS1 174 aa11.63□□□□□ -0.55
KRT4-201ENST00000548097 UBE2D4Q9Y2X8 147 aa11.63□□□□□ -0.55
KRT4-201ENST00000548097 K7EMI3 77 aa11.62□□□□□ -0.55
KRT4-201ENST00000548097 DNAH10OSP0CZ25 163 aa11.62□□□□□ -0.55
KRT4-201ENST00000548097 CLPSL2Q6UWE3 100 aa11.62□□□□□ -0.55
KRT4-201ENST00000548097 HSBP1O75506 76 aa11.61□□□□□ -0.55
KRT4-201ENST00000548097 LINC01556Q5JQF7 62 aa11.61□□□□□ -0.55
KRT4-201ENST00000548097 CHCHD1Q96BP2 118 aaKnown RBP11.61□□□□□ -0.55
KRT4-201ENST00000548097 KLK12Q9UKR0 248 aa11.61□□□□□ -0.55
KRT4-201ENST00000548097 CYSLTR1Q9Y271 337 aa11.61□□□□□ -0.55
KRT4-201ENST00000548097 ANGP03950 147 aaKnown RBP11.6□□□□□ -0.55
KRT4-201ENST00000548097 TOMM6Q96B49 74 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms