RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 NIT2Q9NQR4 276 aa12.98□□□□□ -0.33
SSH1-207ENST00000547862 A0A1B0GUV1 79 aa12.97□□□□□ -0.33
SSH1-207ENST00000547862 PGLYRP4Q96LB8 373 aa12.97□□□□□ -0.33
SSH1-207ENST00000547862 MED9Q9NWA0 146 aa12.97□□□□□ -0.33
SSH1-207ENST00000547862 A0A087WYN8 130 aa12.96□□□□□ -0.33
SSH1-207ENST00000547862 GAGE12HA6NDE8 117 aa12.96□□□□□ -0.33
SSH1-207ENST00000547862 F2Z2F3 143 aa12.96□□□□□ -0.33
SSH1-207ENST00000547862 TEX46H3BTG2 121 aa12.96□□□□□ -0.33
SSH1-207ENST00000547862 SLPIP03973 132 aa12.96□□□□□ -0.33
SSH1-207ENST00000547862 NTF3P20783 257 aa12.96□□□□□ -0.33
SSH1-207ENST00000547862 MEF2BQ02080 365 aaPredicted RBP12.96□□□□□ -0.33
SSH1-207ENST00000547862 TRBV20OR9-2A0A075B6H5 130 aa12.95□□□□□ -0.34
SSH1-207ENST00000547862 TRAV26-2A0A0B4J265 109 aa12.95□□□□□ -0.34
SSH1-207ENST00000547862 CIRBPQ14011 172 aaKnown RBP12.95□□□□□ -0.34
SSH1-207ENST00000547862 TWIST1Q15672 202 aa12.95□□□□□ -0.34
SSH1-207ENST00000547862 HIGD2BQ4VC39 106 aa12.95□□□□□ -0.34
SSH1-207ENST00000547862 TRAV1-1A0A0B4J248 108 aa12.94□□□□□ -0.34
SSH1-207ENST00000547862 PDE6DO43924 150 aa12.94□□□□□ -0.34
SSH1-207ENST00000547862 C15orf56Q8N910 161 aa12.94□□□□□ -0.34
SSH1-207ENST00000547862 SPACA4Q8TDM5 124 aa12.94□□□□□ -0.34
SSH1-207ENST00000547862 SMIM12Q96EX1 92 aa12.94□□□□□ -0.34
SSH1-207ENST00000547862 MT1HL1P0DM35 61 aa12.93□□□□□ -0.34
SSH1-207ENST00000547862 CTRLP40313 264 aa12.93□□□□□ -0.34
SSH1-207ENST00000547862 PHOX2AO14813 284 aa12.92□□□□□ -0.34
SSH1-207ENST00000547862 BCL2P10415 239 aa12.92□□□□□ -0.34
SSH1-207ENST00000547862 AMMECR1LQ6DCA0 310 aa12.92□□□□□ -0.34
SSH1-207ENST00000547862 Q6ZRU5 148 aa12.92□□□□□ -0.34
SSH1-207ENST00000547862 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.91□□□□□ -0.34
SSH1-207ENST00000547862 IGKV2-24A0A0C4DH68 120 aa12.91□□□□□ -0.34
SSH1-207ENST00000547862 IGKV2-29A2NJV5 120 aaPredicted RBP12.91□□□□□ -0.34
SSH1-207ENST00000547862 RNASEKQ6P5S7 137 aaKnown RBP12.91□□□□□ -0.34
SSH1-207ENST00000547862 Q6ZNX1 250 aa12.91□□□□□ -0.34
SSH1-207ENST00000547862 GATD1Q8NB37 220 aa12.91□□□□□ -0.34
SSH1-207ENST00000547862 NUDT10Q8NFP7 164 aa12.91□□□□□ -0.34
SSH1-207ENST00000547862 RPL39LQ96EH5 51 aaKnown RBP12.91□□□□□ -0.34
SSH1-207ENST00000547862 NUDT11Q96G61 164 aa12.91□□□□□ -0.34
SSH1-207ENST00000547862 RNF185Q96GF1 192 aa12.91□□□□□ -0.34
SSH1-207ENST00000547862 RNASE7Q9H1E1 156 aaKnown RBP12.91□□□□□ -0.34
SSH1-207ENST00000547862 BIN3Q9NQY0 253 aa12.91□□□□□ -0.34
SSH1-207ENST00000547862 COX6A2Q02221 97 aa12.9□□□□□ -0.34
SSH1-207ENST00000547862 EIF5AL1Q6IS14 154 aaKnown RBP12.9□□□□□ -0.34
SSH1-207ENST00000547862 RPP21Q9H633 154 aaKnown RBP12.9□□□□□ -0.34
SSH1-207ENST00000547862 MAJINQ3KP22 176 aa12.89□□□□□ -0.35
SSH1-207ENST00000547862 C7orf33Q8WU49 177 aa12.89□□□□□ -0.35
SSH1-207ENST00000547862 UBR4Q5T4S7 5183 aa12.88□□□□□ -0.35
SSH1-207ENST00000547862 APCSP02743 223 aa12.88□□□□□ -0.35
SSH1-207ENST00000547862 CFAP161Q6P656 301 aa12.88□□□□□ -0.35
SSH1-207ENST00000547862 C9orf62Q8N4C0 152 aa12.88□□□□□ -0.35
SSH1-207ENST00000547862 CHCHD10Q8WYQ3 142 aaPredicted RBP12.88□□□□□ -0.35
SSH1-207ENST00000547862 PRSS3P2Q8NHM4 247 aa12.87□□□□□ -0.35
SSH1-207ENST00000547862 GTSF1Q8WW33 167 aa12.87□□□□□ -0.35
SSH1-207ENST00000547862 PLAC8Q9NZF1 115 aa12.87□□□□□ -0.35
SSH1-207ENST00000547862 K7EN84 100 aa12.86□□□□□ -0.35
SSH1-207ENST00000547862 RPS10P46783 165 aaKnown RBP12.86□□□□□ -0.35
SSH1-207ENST00000547862 FOXA3P55318 350 aaPredicted RBP12.86□□□□□ -0.35
SSH1-207ENST00000547862 SMIM15Q7Z3B0 74 aa12.86□□□□□ -0.35
SSH1-207ENST00000547862 LYPD6BQ8NI32 183 aa12.86□□□□□ -0.35
SSH1-207ENST00000547862 NDUFS6O75380 124 aaKnown RBP12.85□□□□□ -0.35
SSH1-207ENST00000547862 CNFNQ9BYD5 112 aa12.85□□□□□ -0.35
SSH1-207ENST00000547862 FGF6P10767 208 aa12.84□□□□□ -0.35
SSH1-207ENST00000547862 STPG4Q8N801 248 aa12.84□□□□□ -0.35
SSH1-207ENST00000547862 SDHAF1A6NFY7 115 aa12.83□□□□□ -0.36
SSH1-207ENST00000547862 OCC1Q8TAD7 63 aa12.83□□□□□ -0.36
SSH1-207ENST00000547862 A0A096LNI7 61 aa12.82□□□□□ -0.36
SSH1-207ENST00000547862 NCR2O95944 276 aa12.82□□□□□ -0.36
SSH1-207ENST00000547862 XCL1P47992 114 aa12.82□□□□□ -0.36
SSH1-207ENST00000547862 LINC00526Q96FQ7 95 aa12.82□□□□□ -0.36
SSH1-207ENST00000547862 GVQW2A0A096LPI5 108 aaPredicted RBP12.81□□□□□ -0.36
SSH1-207ENST00000547862 PRR3P79522 188 aaKnown RBP12.81□□□□□ -0.36
SSH1-207ENST00000547862 GATCO43716 136 aaKnown RBP12.8□□□□□ -0.36
SSH1-207ENST00000547862 PMCHP20382 165 aa12.8□□□□□ -0.36
SSH1-207ENST00000547862 CEBPGP53567 150 aa12.8□□□□□ -0.36
SSH1-207ENST00000547862 FOXI1Q12951 378 aa12.8□□□□□ -0.36
SSH1-207ENST00000547862 BTF3L4Q96K17 158 aa12.8□□□□□ -0.36
SSH1-207ENST00000547862 CCL25O15444 150 aa12.79□□□□□ -0.36
SSH1-207ENST00000547862 ODF1Q14990 250 aa12.79□□□□□ -0.36
SSH1-207ENST00000547862 SLC51BQ86UW2 128 aa12.79□□□□□ -0.36
SSH1-207ENST00000547862 TMEM101Q96IK0 257 aa12.79□□□□□ -0.36
SSH1-207ENST00000547862 TMEM242Q9NWH2 141 aa12.79□□□□□ -0.36
SSH1-207ENST00000547862 H7C423 109 aa12.78□□□□□ -0.36
SSH1-207ENST00000547862 TAGLN2P37802 199 aaKnown RBP12.78□□□□□ -0.36
SSH1-207ENST00000547862 OR5A1Q8NGJ0 315 aa12.78□□□□□ -0.36
SSH1-207ENST00000547862 TNXBP22105 4242 aa12.77□□□□□ -0.36
SSH1-207ENST00000547862 I3L3M4 83 aa12.77□□□□□ -0.37
SSH1-207ENST00000547862 GAS8-AS1O95177 125 aa12.77□□□□□ -0.37
SSH1-207ENST00000547862 ZNF25P17030 456 aaPredicted RBP12.77□□□□□ -0.37
SSH1-207ENST00000547862 CARD19Q96LW7 228 aa12.77□□□□□ -0.37
SSH1-207ENST00000547862 TEX261Q6UWH6 196 aa12.76□□□□□ -0.37
SSH1-207ENST00000547862 LINC00959A0A1B0GUT2 108 aa12.75□□□□□ -0.37
SSH1-207ENST00000547862 FAM231BA6NCW3 169 aa12.75□□□□□ -0.37
SSH1-207ENST00000547862 TCTE3Q8IZS6 198 aa12.75□□□□□ -0.37
SSH1-207ENST00000547862 BORCS7Q96B45 105 aa12.75□□□□□ -0.37
SSH1-207ENST00000547862 MRAP2Q96G30 205 aa12.75□□□□□ -0.37
SSH1-207ENST00000547862 IGHV1-58A0A0C4DH39 117 aa12.74□□□□□ -0.37
SSH1-207ENST00000547862 A8MWL6 223 aa12.74□□□□□ -0.37
SSH1-207ENST00000547862 TSHBP01222 138 aa12.74□□□□□ -0.37
SSH1-207ENST00000547862 ST20Q9HBF5 79 aa12.74□□□□□ -0.37
SSH1-207ENST00000547862 SS18Q15532 418 aa12.72□□□□□ -0.37
SSH1-207ENST00000547862 ALKAL2Q6UX46 152 aa12.72□□□□□ -0.37
SSH1-207ENST00000547862 TRBV6-5A0A0K0K1A5 114 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms