RNA–Protein interactions for RNA: ENST00000547687.1

CHMP1A-204, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 1 (best)

Gene CHMP1A, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-204ENST00000547687 F8VRH5 84 aa11.96□□□□□ -0.5
CHMP1A-204ENST00000547687 TP53TG1Q9Y2A0 90 aa11.96□□□□□ -0.5
CHMP1A-204ENST00000547687 IGKV2D-26A0A0A0MRZ7 120 aa11.95□□□□□ -0.5
CHMP1A-204ENST00000547687 SIVA1O15304 175 aa11.95□□□□□ -0.5
CHMP1A-204ENST00000547687 C11orf72Q8NBR9 251 aa11.95□□□□□ -0.5
CHMP1A-204ENST00000547687 IGHV3-73A0A0B4J1V6 119 aa11.94□□□□□ -0.5
CHMP1A-204ENST00000547687 SPXQ9BT56 116 aa11.94□□□□□ -0.5
CHMP1A-204ENST00000547687 PRSS29PA6NIE9 313 aa11.93□□□□□ -0.5
CHMP1A-204ENST00000547687 IGIPA6NJ69 53 aa11.93□□□□□ -0.5
CHMP1A-204ENST00000547687 RPL35AP18077 110 aaKnown RBP11.93□□□□□ -0.5
CHMP1A-204ENST00000547687 PTTG1IPP53801 180 aa11.93□□□□□ -0.5
CHMP1A-204ENST00000547687 UFSP1Q6NVU6 142 aa11.93□□□□□ -0.5
CHMP1A-204ENST00000547687 ORAOV1Q8WV07 137 aa11.93□□□□□ -0.5
CHMP1A-204ENST00000547687 EDA2RQ9HAV5 297 aa11.93□□□□□ -0.5
CHMP1A-204ENST00000547687 RPL39P62891 51 aaKnown RBP11.93□□□□□ -0.5
CHMP1A-204ENST00000547687 C1orf158Q8N1D5 194 aa11.93□□□□□ -0.5
CHMP1A-204ENST00000547687 I3L3M4 83 aa11.92□□□□□ -0.5
CHMP1A-204ENST00000547687 RHOHQ15669 191 aa11.92□□□□□ -0.5
CHMP1A-204ENST00000547687 TMEM97Q5BJF2 176 aa11.92□□□□□ -0.5
CHMP1A-204ENST00000547687 TMEM141Q96I45 108 aa11.92□□□□□ -0.5
CHMP1A-204ENST00000547687 HUWE1Q7Z6Z7 4374 aaKnown RBP11.92□□□□□ -0.5
CHMP1A-204ENST00000547687 IGHV3OR16-12A0A075B7B8 117 aa11.91□□□□□ -0.5
CHMP1A-204ENST00000547687 TSHBP01222 138 aa11.91□□□□□ -0.5
CHMP1A-204ENST00000547687 GIG44P09565 113 aaPredicted RBP11.91□□□□□ -0.5
CHMP1A-204ENST00000547687 AZU1P20160 251 aa11.91□□□□□ -0.5
CHMP1A-204ENST00000547687 CFAP126Q5VTH2 177 aa11.91□□□□□ -0.5
CHMP1A-204ENST00000547687 TENM3Q9P273 2699 aa11.91□□□□□ -0.5
CHMP1A-204ENST00000547687 TIMM17AQ99595 171 aa11.91□□□□□ -0.5
CHMP1A-204ENST00000547687 MRPL16Q9NX20 251 aaKnown RBP11.91□□□□□ -0.5
CHMP1A-204ENST00000547687 STAB2Q8WWQ8 2551 aa11.9□□□□□ -0.5
CHMP1A-204ENST00000547687 TTTY13Q9BZ97 58 aa11.9□□□□□ -0.5
CHMP1A-204ENST00000547687 P0DMU3 169 aa11.89□□□□□ -0.51
CHMP1A-204ENST00000547687 FAM231AP0DMU4 169 aa11.89□□□□□ -0.51
CHMP1A-204ENST00000547687 FAM231CP0DMU5 169 aa11.89□□□□□ -0.51
CHMP1A-204ENST00000547687 CCL25O15444 150 aa11.89□□□□□ -0.51
CHMP1A-204ENST00000547687 PMVKQ15126 192 aa11.89□□□□□ -0.51
CHMP1A-204ENST00000547687 Q6ZSN1 163 aa11.89□□□□□ -0.51
CHMP1A-204ENST00000547687 Q6ZVH6 145 aa11.89□□□□□ -0.51
CHMP1A-204ENST00000547687 B9D2Q9BPU9 175 aa11.89□□□□□ -0.51
CHMP1A-204ENST00000547687 TNFRSF18Q9Y5U5 241 aa11.89□□□□□ -0.51
CHMP1A-204ENST00000547687 COX11Q9Y6N1 276 aa11.89□□□□□ -0.51
CHMP1A-204ENST00000547687 NBEAL2Q6ZNJ1 2754 aa11.88□□□□□ -0.51
CHMP1A-204ENST00000547687 RHODO00212 210 aa11.88□□□□□ -0.51
CHMP1A-204ENST00000547687 RS1O15537 224 aa11.88□□□□□ -0.51
CHMP1A-204ENST00000547687 HSD52Q0P140 79 aa11.88□□□□□ -0.51
CHMP1A-204ENST00000547687 CST9LQ9H4G1 147 aa11.87□□□□□ -0.51
CHMP1A-204ENST00000547687 C20orf203Q8NBC4 194 aa11.87□□□□□ -0.51
CHMP1A-204ENST00000547687 TRAV8-6A0A0B4J262 113 aa11.86□□□□□ -0.51
CHMP1A-204ENST00000547687 SEC11AP67812 179 aa11.86□□□□□ -0.51
CHMP1A-204ENST00000547687 UBE2V1Q13404 147 aa11.86□□□□□ -0.51
CHMP1A-204ENST00000547687 MAPKAPK5-AS1Q8N8E1 139 aa11.86□□□□□ -0.51
CHMP1A-204ENST00000547687 HIGD1BQ9P298 99 aa11.86□□□□□ -0.51
CHMP1A-204ENST00000547687 TAX1BP3O14907 124 aa11.86□□□□□ -0.51
CHMP1A-204ENST00000547687 IL17DQ8TAD2 202 aa11.86□□□□□ -0.51
CHMP1A-204ENST00000547687 TRBV25-1A0A075B6N4 114 aa11.85□□□□□ -0.51
CHMP1A-204ENST00000547687 IGHV3-53P01767 116 aa11.85□□□□□ -0.51
CHMP1A-204ENST00000547687 PAPPA-AS1Q5QFB9 102 aa11.85□□□□□ -0.51
CHMP1A-204ENST00000547687 CSNK1G2-AS1Q8NCQ2 148 aa11.85□□□□□ -0.51
CHMP1A-204ENST00000547687 C1QTNF4Q9BXJ3 329 aa11.85□□□□□ -0.51
CHMP1A-204ENST00000547687 IGLV4-69A0A075B6H9 119 aa11.84□□□□□ -0.51
CHMP1A-204ENST00000547687 Q9UF83 564 aa11.84□□□□□ -0.51
CHMP1A-204ENST00000547687 TRGV1A0A0A0MS02 117 aa11.84□□□□□ -0.51
CHMP1A-204ENST00000547687 TMEM263Q8WUH6 116 aaKnown RBP11.84□□□□□ -0.51
CHMP1A-204ENST00000547687 DNAJC30Q96LL9 226 aa11.84□□□□□ -0.51
CHMP1A-204ENST00000547687 C11orf86A6NJI1 115 aa11.83□□□□□ -0.52
CHMP1A-204ENST00000547687 RNF151Q2KHN1 245 aa11.83□□□□□ -0.52
CHMP1A-204ENST00000547687 OR11H2Q8NH07 326 aa11.83□□□□□ -0.52
CHMP1A-204ENST00000547687 OPRPNQ99935 248 aaPredicted RBP11.83□□□□□ -0.52
CHMP1A-204ENST00000547687 VPS25Q9BRG1 176 aa11.83□□□□□ -0.52
CHMP1A-204ENST00000547687 E9PLD3 99 aa11.82□□□□□ -0.52
CHMP1A-204ENST00000547687 EMP1P54849 157 aa11.82□□□□□ -0.52
CHMP1A-204ENST00000547687 OR4C5Q8NGB2 326 aa11.82□□□□□ -0.52
CHMP1A-204ENST00000547687 CHAC1Q9BUX1 264 aa11.82□□□□□ -0.52
CHMP1A-204ENST00000547687 SBSPONQ8IVN8 264 aa11.82□□□□□ -0.52
CHMP1A-204ENST00000547687 A6NDN8 102 aa11.81□□□□□ -0.52
CHMP1A-204ENST00000547687 DNAH7Q8WXX0 4024 aa11.81□□□□□ -0.52
CHMP1A-204ENST00000547687 NACAE9PAV3 2078 aa11.81□□□□□ -0.52
CHMP1A-204ENST00000547687 IGHV4-30-4P0DP06 118 aa11.81□□□□□ -0.52
CHMP1A-204ENST00000547687 PRADC1Q9BSG0 188 aa11.81□□□□□ -0.52
CHMP1A-204ENST00000547687 MYMXA0A1B0GTQ4 84 aa11.8□□□□□ -0.52
CHMP1A-204ENST00000547687 Q6ZTI0 123 aa11.8□□□□□ -0.52
CHMP1A-204ENST00000547687 KMT2CQ8NEZ4 4911 aaKnown RBP11.79□□□□□ -0.52
CHMP1A-204ENST00000547687 IGLV4-3A0A075B6K6 122 aa11.79□□□□□ -0.52
CHMP1A-204ENST00000547687 VCX2Q9H322 139 aa11.79□□□□□ -0.52
CHMP1A-204ENST00000547687 NOP10Q9NPE3 64 aaKnown RBP11.79□□□□□ -0.52
CHMP1A-204ENST00000547687 PYGO1Q9Y3Y4 419 aa11.79□□□□□ -0.52
CHMP1A-204ENST00000547687 GCSHP23434 173 aa11.79□□□□□ -0.52
CHMP1A-204ENST00000547687 HERVK_113P61574 105 aa11.79□□□□□ -0.52
CHMP1A-204ENST00000547687 DAZ2Q13117 558 aaKnown RBP11.79□□□□□ -0.52
CHMP1A-204ENST00000547687 ZNRF2Q8NHG8 242 aa11.79□□□□□ -0.52
CHMP1A-204ENST00000547687 C16orf74Q96GX8 76 aa11.79□□□□□ -0.52
CHMP1A-204ENST00000547687 ZNF479Q96JC4 524 aa11.79□□□□□ -0.52
CHMP1A-204ENST00000547687 PHLDA1Q8WV24 401 aaPredicted RBP11.78□□□□□ -0.52
CHMP1A-204ENST00000547687 CHCHD7Q9BUK0 85 aa11.78□□□□□ -0.52
CHMP1A-204ENST00000547687 TRAV4A0A0B4J268 109 aa11.77□□□□□ -0.52
CHMP1A-204ENST00000547687 IGHV3-38A0A0C4DH36 116 aa11.77□□□□□ -0.52
CHMP1A-204ENST00000547687 VAMP3Q15836 100 aa11.77□□□□□ -0.52
CHMP1A-204ENST00000547687 TMEM170BQ5T4T1 132 aa11.77□□□□□ -0.52
CHMP1A-204ENST00000547687 NFE4Q86UQ8 179 aa11.77□□□□□ -0.52
CHMP1A-204ENST00000547687 H3BRM9 83 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms