RNA–Protein interactions for RNA: ENST00000547230.5

CACNB3-204, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3 BASIC

Gene CACNB3, Length 2,395 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-204ENST00000547230 CSPG4Q6UVK1 2322 aa9.27□□□□□ -0.93
CACNB3-204ENST00000547230 NHLRC4P0CG21 123 aaPredicted RBP9.27□□□□□ -0.93
CACNB3-204ENST00000547230 HTN1P15515 57 aa9.27□□□□□ -0.93
CACNB3-204ENST00000547230 RPL13AP40429 203 aaKnown RBP9.27□□□□□ -0.93
CACNB3-204ENST00000547230 SPANXDQ9BXN6 97 aa9.27□□□□□ -0.93
CACNB3-204ENST00000547230 EDA2RQ9HAV5 297 aa9.27□□□□□ -0.93
CACNB3-204ENST00000547230 SPANXCQ9NY87 97 aa9.27□□□□□ -0.93
CACNB3-204ENST00000547230 IGHV4-59P01825 116 aa9.26□□□□□ -0.93
CACNB3-204ENST00000547230 CCL19Q99731 98 aa9.26□□□□□ -0.93
CACNB3-204ENST00000547230 KNCNA6PVL3 124 aa9.26□□□□□ -0.93
CACNB3-204ENST00000547230 H3BMM0 161 aa9.26□□□□□ -0.93
CACNB3-204ENST00000547230 SNCGO76070 127 aa9.26□□□□□ -0.93
CACNB3-204ENST00000547230 PRM2P04554 102 aa9.26□□□□□ -0.93
CACNB3-204ENST00000547230 MIAQ16674 131 aa9.26□□□□□ -0.93
CACNB3-204ENST00000547230 UBE2WQ96B02 151 aa9.26□□□□□ -0.93
CACNB3-204ENST00000547230 VSIG2Q96IQ7 327 aa9.26□□□□□ -0.93
CACNB3-204ENST00000547230 TRAV8-4A0A0B4J246 113 aa9.25□□□□□ -0.93
CACNB3-204ENST00000547230 RNF152Q8N8N0 203 aa9.25□□□□□ -0.93
CACNB3-204ENST00000547230 GNLYP22749 145 aa9.24□□□□□ -0.93
CACNB3-204ENST00000547230 GAGE2BQ13066 116 aa9.24□□□□□ -0.93
CACNB3-204ENST00000547230 GAGE2EQ4V326 116 aa9.24□□□□□ -0.93
CACNB3-204ENST00000547230 Q6ZSN1 163 aa9.24□□□□□ -0.93
CACNB3-204ENST00000547230 CHCHD7Q9BUK0 85 aa9.24□□□□□ -0.93
CACNB3-204ENST00000547230 GAGE2DQ9UEU5 116 aa9.24□□□□□ -0.93
CACNB3-204ENST00000547230 TNFRSF18Q9Y5U5 241 aa9.24□□□□□ -0.93
CACNB3-204ENST00000547230 TINCRA0A1B0GVN0 87 aa9.24□□□□□ -0.93
CACNB3-204ENST00000547230 H7C423 109 aa9.24□□□□□ -0.93
CACNB3-204ENST00000547230 SHISA2Q6UWI4 295 aa9.24□□□□□ -0.93
CACNB3-204ENST00000547230 C2orf82Q6UX34 121 aa9.24□□□□□ -0.93
CACNB3-204ENST00000547230 CLEC2BQ92478 149 aa9.24□□□□□ -0.93
CACNB3-204ENST00000547230 UBE2D4Q9Y2X8 147 aa9.24□□□□□ -0.93
CACNB3-204ENST00000547230 SPG11Q96JI7 2443 aa9.24□□□□□ -0.93
CACNB3-204ENST00000547230 ITPR1Q14643 2758 aa9.23□□□□□ -0.93
CACNB3-204ENST00000547230 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.23□□□□□ -0.93
CACNB3-204ENST00000547230 IGKV2-29A2NJV5 120 aaPredicted RBP9.23□□□□□ -0.93
CACNB3-204ENST00000547230 ATP5J2P56134 94 aa9.23□□□□□ -0.93
CACNB3-204ENST00000547230 DEFB112Q30KQ8 113 aa9.23□□□□□ -0.93
CACNB3-204ENST00000547230 CHD8Q9HCK8 2581 aa9.23□□□□□ -0.93
CACNB3-204ENST00000547230 NDUFV3P56181 108 aaKnown RBP9.22□□□□□ -0.93
CACNB3-204ENST00000547230 TMEM61Q8N0U2 210 aa9.22□□□□□ -0.93
CACNB3-204ENST00000547230 RBMY1BA6NDE4 496 aaKnown RBP9.22□□□□□ -0.93
CACNB3-204ENST00000547230 RBMY1EA6NEQ0 496 aaKnown RBP9.22□□□□□ -0.93
CACNB3-204ENST00000547230 RBMY1DP0C7P1 496 aaKnown RBP9.22□□□□□ -0.93
CACNB3-204ENST00000547230 HOXD3P31249 432 aaPredicted RBP9.22□□□□□ -0.93
CACNB3-204ENST00000547230 C15orf53Q8NAA6 179 aa9.22□□□□□ -0.93
CACNB3-204ENST00000547230 LINC00467Q9BRT7 94 aa9.22□□□□□ -0.93
CACNB3-204ENST00000547230 SPANXA1Q9NS26 97 aa9.22□□□□□ -0.93
CACNB3-204ENST00000547230 SS18L2Q9UHA2 77 aa9.22□□□□□ -0.93
CACNB3-204ENST00000547230 ACACBO00763 2458 aa9.21□□□□□ -0.93
CACNB3-204ENST00000547230 GAGE5Q13069 117 aa9.21□□□□□ -0.93
CACNB3-204ENST00000547230 GAGE6Q13070 117 aa9.21□□□□□ -0.93
CACNB3-204ENST00000547230 DAND5Q8N907 189 aa9.21□□□□□ -0.93
CACNB3-204ENST00000547230 TMEM89A2RUT3 159 aa9.21□□□□□ -0.94
CACNB3-204ENST00000547230 H3BT86 120 aa9.21□□□□□ -0.94
CACNB3-204ENST00000547230 DUX3Q96PT4 197 aa9.21□□□□□ -0.94
CACNB3-204ENST00000547230 KMT2BQ9UMN6 2715 aaPredicted RBP9.21□□□□□ -0.94
CACNB3-204ENST00000547230 IGHV3-38A0A0C4DH36 116 aa9.2□□□□□ -0.94
CACNB3-204ENST00000547230 LST1O00453 97 aa9.2□□□□□ -0.94
CACNB3-204ENST00000547230 COX6CP09669 75 aa9.2□□□□□ -0.94
CACNB3-204ENST00000547230 DEFB131AP59861 70 aa9.2□□□□□ -0.94
CACNB3-204ENST00000547230 B5MCH6 92 aa9.2□□□□□ -0.94
CACNB3-204ENST00000547230 Q6Q795 121 aa9.2□□□□□ -0.94
CACNB3-204ENST00000547230 B4DSR2 109 aa9.19□□□□□ -0.94
CACNB3-204ENST00000547230 YAE1D1Q9NRH1 226 aa9.19□□□□□ -0.94
CACNB3-204ENST00000547230 CDKN2A-AS1Q9UH64 79 aa9.19□□□□□ -0.94
CACNB3-204ENST00000547230 CREBBPQ92793 2442 aa9.19□□□□□ -0.94
CACNB3-204ENST00000547230 IFITM1P13164 125 aa9.19□□□□□ -0.94
CACNB3-204ENST00000547230 TTC32Q5I0X7 151 aa9.19□□□□□ -0.94
CACNB3-204ENST00000547230 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.19□□□□□ -0.94
CACNB3-204ENST00000547230 TIMM17BO60830 172 aa9.18□□□□□ -0.94
CACNB3-204ENST00000547230 A8MTW9 85 aa9.17□□□□□ -0.94
CACNB3-204ENST00000547230 CCDC179H3BU77 68 aa9.17□□□□□ -0.94
CACNB3-204ENST00000547230 ZNF415Q09FC8 603 aa9.17□□□□□ -0.94
CACNB3-204ENST00000547230 NDUFA1O15239 70 aa9.17□□□□□ -0.94
CACNB3-204ENST00000547230 TMEM101Q96IK0 257 aa9.17□□□□□ -0.94
CACNB3-204ENST00000547230 SLURP1P55000 103 aa9.16□□□□□ -0.94
CACNB3-204ENST00000547230 DEFB136Q30KP8 78 aa9.16□□□□□ -0.94
CACNB3-204ENST00000547230 C18orf65Q6ZTR6 163 aa9.16□□□□□ -0.94
CACNB3-204ENST00000547230 CITED2Q99967 270 aaPredicted RBP9.16□□□□□ -0.94
CACNB3-204ENST00000547230 EPG5Q9HCE0 2579 aa9.16□□□□□ -0.94
CACNB3-204ENST00000547230 IGLV5-45A0A087WSX0 123 aa9.16□□□□□ -0.94
CACNB3-204ENST00000547230 COX6A2Q02221 97 aa9.16□□□□□ -0.94
CACNB3-204ENST00000547230 DEFB121Q5J5C9 76 aa9.16□□□□□ -0.94
CACNB3-204ENST00000547230 USP24Q9UPU5 2620 aa9.16□□□□□ -0.94
CACNB3-204ENST00000547230 IGHV3-53P01767 116 aa9.15□□□□□ -0.94
CACNB3-204ENST00000547230 PIK3CD-AS1Q5SR53 167 aa9.15□□□□□ -0.94
CACNB3-204ENST00000547230 C11orf72Q8NBR9 251 aa9.15□□□□□ -0.94
CACNB3-204ENST00000547230 UBE2E2Q96LR5 201 aa9.15□□□□□ -0.94
CACNB3-204ENST00000547230 GAGE12JA6NER3 117 aa9.15□□□□□ -0.95
CACNB3-204ENST00000547230 GAGE7O76087 117 aa9.15□□□□□ -0.95
CACNB3-204ENST00000547230 GAGE12FP0CL80 117 aa9.15□□□□□ -0.95
CACNB3-204ENST00000547230 GAGE12GP0CL81 117 aa9.15□□□□□ -0.95
CACNB3-204ENST00000547230 GAGE12IP0CL82 117 aa9.15□□□□□ -0.95
CACNB3-204ENST00000547230 TIRAPP58753 221 aa9.15□□□□□ -0.95
CACNB3-204ENST00000547230 GAGE4Q13068 117 aa9.15□□□□□ -0.95
CACNB3-204ENST00000547230 ZNF702PQ9H963 129 aa9.15□□□□□ -0.95
CACNB3-204ENST00000547230 IGHV3OR16-12A0A075B7B8 117 aa9.14□□□□□ -0.95
CACNB3-204ENST00000547230 LINC00308Q8TCZ7 52 aa9.14□□□□□ -0.95
CACNB3-204ENST00000547230 NRGNQ92686 78 aa9.14□□□□□ -0.95
CACNB3-204ENST00000547230 ZANQ9Y493 2812 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms