RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 MTURNQ8N3F0 131 aa9.27□□□□□ -0.93
SCAF11-209ENST00000547018 SPXQ9BT56 116 aa9.27□□□□□ -0.93
SCAF11-209ENST00000547018 A0A0J9YXV3 536 aa9.26□□□□□ -0.93
SCAF11-209ENST00000547018 M0R2P5 195 aa9.26□□□□□ -0.93
SCAF11-209ENST00000547018 MED14OSP0DP75 135 aa9.26□□□□□ -0.93
SCAF11-209ENST00000547018 NEXN-AS1Q8NBZ9 246 aa9.26□□□□□ -0.93
SCAF11-209ENST00000547018 ZNF479Q96JC4 524 aa9.26□□□□□ -0.93
SCAF11-209ENST00000547018 DEFB130BP0DP73 79 aa9.26□□□□□ -0.93
SCAF11-209ENST00000547018 DEFB130AP0DP74 79 aa9.26□□□□□ -0.93
SCAF11-209ENST00000547018 DGAT2L7PQ6IED9 249 aa9.26□□□□□ -0.93
SCAF11-209ENST00000547018 PKD1L1Q8TDX9 2849 aa9.26□□□□□ -0.93
SCAF11-209ENST00000547018 PLNP26678 52 aa9.25□□□□□ -0.93
SCAF11-209ENST00000547018 VCX2Q9H322 139 aa9.25□□□□□ -0.93
SCAF11-209ENST00000547018 GAGE12JA6NER3 117 aa9.25□□□□□ -0.93
SCAF11-209ENST00000547018 GAGE4Q13068 117 aa9.25□□□□□ -0.93
SCAF11-209ENST00000547018 GAGE5Q13069 117 aa9.25□□□□□ -0.93
SCAF11-209ENST00000547018 UBE2V1Q13404 147 aa9.25□□□□□ -0.93
SCAF11-209ENST00000547018 GAGE13Q4V321 117 aa9.25□□□□□ -0.93
SCAF11-209ENST00000547018 SHISA2Q6UWI4 295 aa9.25□□□□□ -0.93
SCAF11-209ENST00000547018 TEX29Q8N6K0 151 aa9.25□□□□□ -0.93
SCAF11-209ENST00000547018 LINC00482Q8N8I6 264 aa9.25□□□□□ -0.93
SCAF11-209ENST00000547018 I3L3M4 83 aa9.25□□□□□ -0.93
SCAF11-209ENST00000547018 C1orf158Q8N1D5 194 aa9.25□□□□□ -0.93
SCAF11-209ENST00000547018 TMEM86BQ8N661 226 aa9.25□□□□□ -0.93
SCAF11-209ENST00000547018 A0A0U1RRA0 63 aa9.24□□□□□ -0.93
SCAF11-209ENST00000547018 RNASE1P07998 156 aaKnown RBP9.24□□□□□ -0.93
SCAF11-209ENST00000547018 HSD52Q0P140 79 aa9.24□□□□□ -0.93
SCAF11-209ENST00000547018 OCIAD2Q56VL3 154 aa9.24□□□□□ -0.93
SCAF11-209ENST00000547018 A6NDN8 102 aa9.24□□□□□ -0.93
SCAF11-209ENST00000547018 A8MZ25 164 aa9.24□□□□□ -0.93
SCAF11-209ENST00000547018 H7C2G1 150 aa9.24□□□□□ -0.93
SCAF11-209ENST00000547018 APOMO95445 188 aa9.24□□□□□ -0.93
SCAF11-209ENST00000547018 NPC2P61916 151 aa9.24□□□□□ -0.93
SCAF11-209ENST00000547018 PMVKQ15126 192 aa9.24□□□□□ -0.93
SCAF11-209ENST00000547018 CFAP126Q5VTH2 177 aa9.24□□□□□ -0.93
SCAF11-209ENST00000547018 PLEKHB2Q96CS7 222 aa9.24□□□□□ -0.93
SCAF11-209ENST00000547018 NXPH4O95158 308 aa9.23□□□□□ -0.93
SCAF11-209ENST00000547018 ODF3Q96PU9 254 aa9.23□□□□□ -0.93
SCAF11-209ENST00000547018 CST9LQ9H4G1 147 aa9.23□□□□□ -0.93
SCAF11-209ENST00000547018 MGAM2Q2M2H8 2515 aa9.23□□□□□ -0.93
SCAF11-209ENST00000547018 HILS1P60008 231 aa9.23□□□□□ -0.93
SCAF11-209ENST00000547018 A0A096LPF7 62 aa9.23□□□□□ -0.93
SCAF11-209ENST00000547018 GAGE10A6NGK3 116 aa9.23□□□□□ -0.93
SCAF11-209ENST00000547018 RRN3P1Q2M238 152 aa9.23□□□□□ -0.93
SCAF11-209ENST00000547018 KRTAP10-3P60369 221 aa9.22□□□□□ -0.93
SCAF11-209ENST00000547018 ZMAT4Q9H898 229 aa9.22□□□□□ -0.93
SCAF11-209ENST00000547018 LOC100131303A0A0U1RQF7 123 aa9.22□□□□□ -0.93
SCAF11-209ENST00000547018 NDUFA7O95182 113 aa9.22□□□□□ -0.93
SCAF11-209ENST00000547018 TRBV27A0A0K0K1C4 114 aa9.22□□□□□ -0.93
SCAF11-209ENST00000547018 IGIPA6NJ69 53 aa9.22□□□□□ -0.93
SCAF11-209ENST00000547018 MRPL52Q86TS9 123 aaKnown RBP9.22□□□□□ -0.93
SCAF11-209ENST00000547018 POM121L12Q8N7R1 296 aa9.22□□□□□ -0.93
SCAF11-209ENST00000547018 BAHCC1Q9P281 2608 aa9.21□□□□□ -0.93
SCAF11-209ENST00000547018 TRAV8-3A0A0A6YYJ7 113 aa9.21□□□□□ -0.93
SCAF11-209ENST00000547018 TRAV2A0A0B4J234 112 aa9.21□□□□□ -0.93
SCAF11-209ENST00000547018 C20orf203Q8NBC4 194 aa9.21□□□□□ -0.93
SCAF11-209ENST00000547018 A8MWV9 139 aa9.21□□□□□ -0.94
SCAF11-209ENST00000547018 PRSS2P07478 247 aa9.2□□□□□ -0.94
SCAF11-209ENST00000547018 SMIM13P0DJ93 91 aa9.2□□□□□ -0.94
SCAF11-209ENST00000547018 ZNF625Q96I27 306 aaPredicted RBP9.2□□□□□ -0.94
SCAF11-209ENST00000547018 TRAV13-1A0A0B4J241 112 aa9.2□□□□□ -0.94
SCAF11-209ENST00000547018 LINC01546A6NGU7 62 aa9.2□□□□□ -0.94
SCAF11-209ENST00000547018 MYMXA0A1B0GTQ4 84 aa9.2□□□□□ -0.94
SCAF11-209ENST00000547018 LINC00467Q9BRT7 94 aa9.2□□□□□ -0.94
SCAF11-209ENST00000547018 TSPEAR-AS2P59090 65 aa9.19□□□□□ -0.94
SCAF11-209ENST00000547018 FHL3Q13643 280 aa9.19□□□□□ -0.94
SCAF11-209ENST00000547018 C11orf72Q8NBR9 251 aa9.19□□□□□ -0.94
SCAF11-209ENST00000547018 IGLV4-69A0A075B6H9 119 aa9.19□□□□□ -0.94
SCAF11-209ENST00000547018 LGALS3P17931 250 aaKnown RBP9.19□□□□□ -0.94
SCAF11-209ENST00000547018 HERVK_113P61574 105 aa9.19□□□□□ -0.94
SCAF11-209ENST00000547018 SEC11AP67812 179 aa9.19□□□□□ -0.94
SCAF11-209ENST00000547018 TRGV4A0A0C4DH28 118 aa9.18□□□□□ -0.94
SCAF11-209ENST00000547018 TRAV12-1A0A0B4J245 112 aa9.18□□□□□ -0.94
SCAF11-209ENST00000547018 SPINK8P0C7L1 97 aa9.18□□□□□ -0.94
SCAF11-209ENST00000547018 Q6ZUT4 128 aa9.18□□□□□ -0.94
SCAF11-209ENST00000547018 SPCS1Q9Y6A9 102 aa9.18□□□□□ -0.94
SCAF11-209ENST00000547018 IGLV4-3A0A075B6K6 122 aa9.17□□□□□ -0.94
SCAF11-209ENST00000547018 CEND1Q8N111 149 aa9.17□□□□□ -0.94
SCAF11-209ENST00000547018 LOC107984156A0A0G2JMH3 177 aa9.17□□□□□ -0.94
SCAF11-209ENST00000547018 CRYBA4P53673 196 aa9.17□□□□□ -0.94
SCAF11-209ENST00000547018 SAMD5Q5TGI4 173 aa9.17□□□□□ -0.94
SCAF11-209ENST00000547018 ARL17AQ8IVW1 177 aa9.17□□□□□ -0.94
SCAF11-209ENST00000547018 HTN3P15516 51 aa9.16□□□□□ -0.94
SCAF11-209ENST00000547018 TRAV26-1A0A087WT03 109 aa9.16□□□□□ -0.94
SCAF11-209ENST00000547018 CRLF1O75462 422 aa9.16□□□□□ -0.94
SCAF11-209ENST00000547018 SLC25A29Q8N8R3 303 aa9.16□□□□□ -0.94
SCAF11-209ENST00000547018 GEMIN7Q9H840 131 aaKnown RBP9.16□□□□□ -0.94
SCAF11-209ENST00000547018 TRBV6-5A0A0K0K1A5 114 aa9.15□□□□□ -0.94
SCAF11-209ENST00000547018 J3QQQ9 107 aa9.15□□□□□ -0.94
SCAF11-209ENST00000547018 IGLV1-51P01701 117 aa9.15□□□□□ -0.94
SCAF11-209ENST00000547018 DAND5Q8N907 189 aa9.15□□□□□ -0.94
SCAF11-209ENST00000547018 LINC00694P0DN24 101 aa9.15□□□□□ -0.94
SCAF11-209ENST00000547018 DEFB135Q30KP9 77 aa9.15□□□□□ -0.94
SCAF11-209ENST00000547018 TMEM141Q96I45 108 aa9.15□□□□□ -0.94
SCAF11-209ENST00000547018 C9orf118A6NHY6 69 aa9.14□□□□□ -0.95
SCAF11-209ENST00000547018 E9PLD3 99 aa9.14□□□□□ -0.95
SCAF11-209ENST00000547018 FABP2P12104 132 aa9.14□□□□□ -0.95
SCAF11-209ENST00000547018 GIG44P09565 113 aaPredicted RBP9.14□□□□□ -0.95
SCAF11-209ENST00000547018 RPL24P83731 157 aaKnown RBP9.14□□□□□ -0.95
SCAF11-209ENST00000547018 RPL36AP83881 106 aaKnown RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms