RNA–Protein interactions for RNA: ENST00000546997.1

BRF1-208, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-208ENST00000546997 OR10J6PQ8NGY7 276 aa12.18□□□□□ -0.46
BRF1-208ENST00000546997 DCANP1Q8TF63 244 aa12.18□□□□□ -0.46
BRF1-208ENST00000546997 J3QL48 77 aa12.18□□□□□ -0.46
BRF1-208ENST00000546997 DEFB1P60022 68 aa12.17□□□□□ -0.46
BRF1-208ENST00000546997 TMEM61Q8N0U2 210 aa12.17□□□□□ -0.46
BRF1-208ENST00000546997 LINC00482Q8N8I6 264 aa12.17□□□□□ -0.46
BRF1-208ENST00000546997 SPATA3Q8NHX4 192 aa12.17□□□□□ -0.46
BRF1-208ENST00000546997 PRSS29PA6NIE9 313 aa12.16□□□□□ -0.46
BRF1-208ENST00000546997 PRR9Q5T870 116 aa12.16□□□□□ -0.46
BRF1-208ENST00000546997 C2orf66Q6UXQ4 117 aa12.16□□□□□ -0.46
BRF1-208ENST00000546997 Q6ZQT7 251 aa12.16□□□□□ -0.46
BRF1-208ENST00000546997 C10orf126Q8N4M7 172 aa12.16□□□□□ -0.46
BRF1-208ENST00000546997 RNF183Q96D59 192 aa12.16□□□□□ -0.46
BRF1-208ENST00000546997 ANAPC13Q9BS18 74 aa12.16□□□□□ -0.46
BRF1-208ENST00000546997 DPH3P1Q9H4G8 78 aa12.16□□□□□ -0.46
BRF1-208ENST00000546997 TRAV26-2A0A0B4J265 109 aa12.16□□□□□ -0.46
BRF1-208ENST00000546997 A0A0J9YY99 117 aa12.16□□□□□ -0.46
BRF1-208ENST00000546997 DEFB114Q30KQ6 69 aa12.16□□□□□ -0.46
BRF1-208ENST00000546997 ZFP2Q6ZN57 461 aa12.16□□□□□ -0.46
BRF1-208ENST00000546997 DYNLRB2Q8TF09 96 aa12.16□□□□□ -0.46
BRF1-208ENST00000546997 F6UB75 175 aa12.15□□□□□ -0.46
BRF1-208ENST00000546997 TCL1BO95988 128 aa12.15□□□□□ -0.46
BRF1-208ENST00000546997 ZFAND2AQ8N6M9 145 aa12.15□□□□□ -0.46
BRF1-208ENST00000546997 RASL10AQ92737 203 aa12.15□□□□□ -0.46
BRF1-208ENST00000546997 FAM19A4Q96LR4 140 aa12.15□□□□□ -0.46
BRF1-208ENST00000546997 Q6Q795 121 aa12.14□□□□□ -0.47
BRF1-208ENST00000546997 POM121L12Q8N7R1 296 aa12.14□□□□□ -0.47
BRF1-208ENST00000546997 SLC25A29Q8N8R3 303 aa12.14□□□□□ -0.47
BRF1-208ENST00000546997 ANK2Q01484 3957 aa12.14□□□□□ -0.47
BRF1-208ENST00000546997 PKD1L1Q8TDX9 2849 aa12.14□□□□□ -0.47
BRF1-208ENST00000546997 ID1P41134 155 aa12.13□□□□□ -0.47
BRF1-208ENST00000546997 PLEKHB2Q96CS7 222 aa12.13□□□□□ -0.47
BRF1-208ENST00000546997 PRO1854Q9UHT4 67 aa12.13□□□□□ -0.47
BRF1-208ENST00000546997 K7EQG2 157 aa12.12□□□□□ -0.47
BRF1-208ENST00000546997 RHODO00212 210 aa12.12□□□□□ -0.47
BRF1-208ENST00000546997 IGHV3-30P01768 117 aa12.12□□□□□ -0.47
BRF1-208ENST00000546997 SCGB1C2P0DMR2 95 aa12.12□□□□□ -0.47
BRF1-208ENST00000546997 IGHV3-30-5P0DP03 117 aa12.12□□□□□ -0.47
BRF1-208ENST00000546997 C3orf56Q8N813 242 aa12.12□□□□□ -0.47
BRF1-208ENST00000546997 TMEM141Q96I45 108 aa12.12□□□□□ -0.47
BRF1-208ENST00000546997 TRBV7-9A0A0J9YWB2 115 aa12.12□□□□□ -0.47
BRF1-208ENST00000546997 APRG1Q8IVJ8 170 aa12.12□□□□□ -0.47
BRF1-208ENST00000546997 TRAV21A0A0B4J279 112 aa12.11□□□□□ -0.47
BRF1-208ENST00000546997 C11orf86A6NJI1 115 aa12.11□□□□□ -0.47
BRF1-208ENST00000546997 CFC1BP0CG36 223 aa12.11□□□□□ -0.47
BRF1-208ENST00000546997 CFC1P0CG37 223 aa12.11□□□□□ -0.47
BRF1-208ENST00000546997 P0DMU3 169 aa12.11□□□□□ -0.47
BRF1-208ENST00000546997 FAM231AP0DMU4 169 aa12.11□□□□□ -0.47
BRF1-208ENST00000546997 FAM231CP0DMU5 169 aa12.11□□□□□ -0.47
BRF1-208ENST00000546997 ANKRD29Q8N6D5 301 aa12.11□□□□□ -0.47
BRF1-208ENST00000546997 PTH2Q96A98 100 aa12.1□□□□□ -0.47
BRF1-208ENST00000546997 CMYA5Q8N3K9 4069 aa12.1□□□□□ -0.47
BRF1-208ENST00000546997 H3BVH4 76 aa12.1□□□□□ -0.47
BRF1-208ENST00000546997 PMVKQ15126 192 aa12.1□□□□□ -0.47
BRF1-208ENST00000546997 IGLV1-51P01701 117 aa12.09□□□□□ -0.47
BRF1-208ENST00000546997 CRYGDP07320 174 aa12.09□□□□□ -0.47
BRF1-208ENST00000546997 TIMM17AQ99595 171 aa12.09□□□□□ -0.47
BRF1-208ENST00000546997 IGLV4-69A0A075B6H9 119 aa12.09□□□□□ -0.47
BRF1-208ENST00000546997 SLC25A20O43772 301 aa12.09□□□□□ -0.47
BRF1-208ENST00000546997 RNASE4P34096 147 aaKnown RBP12.09□□□□□ -0.47
BRF1-208ENST00000546997 ZNF256Q9Y2P7 627 aaPredicted RBP12.09□□□□□ -0.47
BRF1-208ENST00000546997 A0A0B4J2C4 111 aa12.08□□□□□ -0.48
BRF1-208ENST00000546997 IGIPA6NJ69 53 aa12.08□□□□□ -0.48
BRF1-208ENST00000546997 SNRPD3P62318 126 aaKnown RBP12.08□□□□□ -0.48
BRF1-208ENST00000546997 GAGE2BQ13066 116 aa12.07□□□□□ -0.48
BRF1-208ENST00000546997 GAGE2EQ4V326 116 aa12.07□□□□□ -0.48
BRF1-208ENST00000546997 SHISA2Q6UWI4 295 aa12.07□□□□□ -0.48
BRF1-208ENST00000546997 GAGE2DQ9UEU5 116 aa12.07□□□□□ -0.48
BRF1-208ENST00000546997 TRAV25A0A0B4J276 109 aa12.07□□□□□ -0.48
BRF1-208ENST00000546997 NXPH4O95158 308 aa12.07□□□□□ -0.48
BRF1-208ENST00000546997 RPL13AP40429 203 aaKnown RBP12.07□□□□□ -0.48
BRF1-208ENST00000546997 MRPL23Q16540 153 aaKnown RBP12.07□□□□□ -0.48
BRF1-208ENST00000546997 TRAV2A0A0B4J234 112 aa12.06□□□□□ -0.48
BRF1-208ENST00000546997 KLLNB2CW77 178 aa12.06□□□□□ -0.48
BRF1-208ENST00000546997 SNCGO76070 127 aa12.06□□□□□ -0.48
BRF1-208ENST00000546997 NHLRC4P0CG21 123 aaPredicted RBP12.06□□□□□ -0.48
BRF1-208ENST00000546997 ANXA2RQ3ZCQ2 193 aa12.06□□□□□ -0.48
BRF1-208ENST00000546997 RPL39LQ96EH5 51 aaKnown RBP12.05□□□□□ -0.48
BRF1-208ENST00000546997 MDFIQ99750 246 aa12.05□□□□□ -0.48
BRF1-208ENST00000546997 PHLDA3Q9Y5J5 127 aa12.05□□□□□ -0.48
BRF1-208ENST00000546997 NDUFV3P56181 108 aaKnown RBP12.05□□□□□ -0.48
BRF1-208ENST00000546997 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.04□□□□□ -0.48
BRF1-208ENST00000546997 A0A0J9YX75 114 aa12.04□□□□□ -0.48
BRF1-208ENST00000546997 GAGE12JA6NER3 117 aa12.04□□□□□ -0.48
BRF1-208ENST00000546997 GAGE7O76087 117 aa12.04□□□□□ -0.48
BRF1-208ENST00000546997 TSHBP01222 138 aa12.04□□□□□ -0.48
BRF1-208ENST00000546997 IGHV3-33P01772 117 aa12.04□□□□□ -0.48
BRF1-208ENST00000546997 GAGE12FP0CL80 117 aa12.04□□□□□ -0.48
BRF1-208ENST00000546997 GAGE12GP0CL81 117 aa12.04□□□□□ -0.48
BRF1-208ENST00000546997 GAGE12IP0CL82 117 aa12.04□□□□□ -0.48
BRF1-208ENST00000546997 GAGE4Q13068 117 aa12.04□□□□□ -0.48
BRF1-208ENST00000546997 AMELXQ99217 191 aa12.04□□□□□ -0.48
BRF1-208ENST00000546997 MAP6D1Q9H9H5 199 aa12.04□□□□□ -0.48
BRF1-208ENST00000546997 S100A4P26447 101 aaKnown RBP12.03□□□□□ -0.48
BRF1-208ENST00000546997 DEFB131AP59861 70 aa12.03□□□□□ -0.48
BRF1-208ENST00000546997 ODF3L2Q3SX64 289 aa12.03□□□□□ -0.48
BRF1-208ENST00000546997 ZNF876PQ49A33 203 aa12.03□□□□□ -0.48
BRF1-208ENST00000546997 VCYO14598 125 aa12.03□□□□□ -0.48
BRF1-208ENST00000546997 GNRH2O43555 120 aa12.03□□□□□ -0.48
BRF1-208ENST00000546997 DUSP14O95147 198 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms