RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 IL17DQ8TAD2 202 aa5.87□□□□□ -1.47
UBR1-202ENST00000546274 FHL2Q14192 279 aa5.87□□□□□ -1.47
UBR1-202ENST00000546274 MINOS1Q5TGZ0 78 aa5.87□□□□□ -1.47
UBR1-202ENST00000546274 FAM110DQ8TAY7 271 aaPredicted RBP5.87□□□□□ -1.47
UBR1-202ENST00000546274 C9orf85Q96MD7 179 aa5.87□□□□□ -1.47
UBR1-202ENST00000546274 LINC01600Q96MT4 127 aa5.87□□□□□ -1.47
UBR1-202ENST00000546274 TIMM21Q9BVV7 248 aa5.87□□□□□ -1.47
UBR1-202ENST00000546274 MINOS1-NBL1R4GNA1 71 aa5.87□□□□□ -1.47
UBR1-202ENST00000546274 IGHV3-66A0A0C4DH42 116 aa5.86□□□□□ -1.47
UBR1-202ENST00000546274 IGHV7-4-1A0A0J9YVY3 117 aa5.86□□□□□ -1.47
UBR1-202ENST00000546274 ATP6V0E1O15342 81 aa5.86□□□□□ -1.47
UBR1-202ENST00000546274 CXCL5P42830 114 aa5.86□□□□□ -1.47
UBR1-202ENST00000546274 OXLD1Q5BKU9 147 aa5.86□□□□□ -1.47
UBR1-202ENST00000546274 C16orf92Q96LL3 132 aa5.86□□□□□ -1.47
UBR1-202ENST00000546274 TSHBP01222 138 aa5.86□□□□□ -1.47
UBR1-202ENST00000546274 GNLYP22749 145 aa5.86□□□□□ -1.47
UBR1-202ENST00000546274 DAZ2Q13117 558 aaKnown RBP5.86□□□□□ -1.47
UBR1-202ENST00000546274 PAPPA-AS1Q5QFB9 102 aa5.86□□□□□ -1.47
UBR1-202ENST00000546274 DAZ4Q86SG3 579 aaKnown RBP5.86□□□□□ -1.47
UBR1-202ENST00000546274 LINC01561Q8N1V8 128 aa5.86□□□□□ -1.47
UBR1-202ENST00000546274 UPK3BQ9BT76 320 aa5.86□□□□□ -1.47
UBR1-202ENST00000546274 DAZ1Q9NQZ3 744 aaKnown RBP5.86□□□□□ -1.47
UBR1-202ENST00000546274 DAZ3Q9NR90 486 aaKnown RBP5.86□□□□□ -1.47
UBR1-202ENST00000546274 ZFYVE26Q68DK2 2539 aa5.86□□□□□ -1.47
UBR1-202ENST00000546274 G3V318 75 aa5.85□□□□□ -1.47
UBR1-202ENST00000546274 ECSCRQ19T08 205 aa5.85□□□□□ -1.47
UBR1-202ENST00000546274 OPRPNQ99935 248 aaPredicted RBP5.85□□□□□ -1.47
UBR1-202ENST00000546274 TMEM243Q9BU79 118 aa5.85□□□□□ -1.47
UBR1-202ENST00000546274 PRRC2AP48634 2157 aaKnown RBP5.85□□□□□ -1.47
UBR1-202ENST00000546274 IGHV3OR16-13A0A075B7E8 117 aa5.85□□□□□ -1.47
UBR1-202ENST00000546274 IGHV3-74A0A0B4J1X5 117 aa5.85□□□□□ -1.47
UBR1-202ENST00000546274 TIRAPP58753 221 aa5.85□□□□□ -1.47
UBR1-202ENST00000546274 USP17L23D6RBM5 183 aa5.84□□□□□ -1.47
UBR1-202ENST00000546274 DCANP1Q8TF63 244 aa5.84□□□□□ -1.47
UBR1-202ENST00000546274 HIST1H4AP62805 103 aaKnown RBP5.84□□□□□ -1.47
UBR1-202ENST00000546274 CLEC19AQ6UXS0 136 aa5.84□□□□□ -1.47
UBR1-202ENST00000546274 C9orf139Q6ZV77 190 aa5.84□□□□□ -1.47
UBR1-202ENST00000546274 SLC50A1Q9BRV3 221 aa5.84□□□□□ -1.47
UBR1-202ENST00000546274 A0A0J9YXY3 114 aa5.84□□□□□ -1.48
UBR1-202ENST00000546274 A0A1W2PRX2 142 aa5.84□□□□□ -1.48
UBR1-202ENST00000546274 NXPH4O95158 308 aa5.84□□□□□ -1.48
UBR1-202ENST00000546274 AVPP01185 164 aa5.84□□□□□ -1.48
UBR1-202ENST00000546274 PRR9Q5T870 116 aa5.84□□□□□ -1.48
UBR1-202ENST00000546274 U3KQE9 123 aa5.84□□□□□ -1.48
UBR1-202ENST00000546274 IGHV4-4A0A075B6R2 117 aa5.83□□□□□ -1.48
UBR1-202ENST00000546274 IGHV3-49A0A0A0MS15 119 aa5.83□□□□□ -1.48
UBR1-202ENST00000546274 SAA4P35542 130 aa5.83□□□□□ -1.48
UBR1-202ENST00000546274 C20orf197Q8N268 126 aa5.83□□□□□ -1.48
UBR1-202ENST00000546274 DAND5Q8N907 189 aa5.83□□□□□ -1.48
UBR1-202ENST00000546274 ABCA2Q9BZC7 2435 aa5.83□□□□□ -1.48
UBR1-202ENST00000546274 FAM223BA6NKX1 122 aa5.83□□□□□ -1.48
UBR1-202ENST00000546274 ADAMTSL4-AS1Q5T5F5 129 aa5.83□□□□□ -1.48
UBR1-202ENST00000546274 C9orf47Q6ZRZ4 202 aa5.83□□□□□ -1.48
UBR1-202ENST00000546274 ATRXP46100 2492 aa5.83□□□□□ -1.48
UBR1-202ENST00000546274 BAALC-AS2P0C853 105 aa5.82□□□□□ -1.48
UBR1-202ENST00000546274 C19orf54Q5BKX5 351 aa5.82□□□□□ -1.48
UBR1-202ENST00000546274 LEPROTO15243 131 aa5.82□□□□□ -1.48
UBR1-202ENST00000546274 IGF1P05019 195 aa5.82□□□□□ -1.48
UBR1-202ENST00000546274 S100A4P26447 101 aaKnown RBP5.82□□□□□ -1.48
UBR1-202ENST00000546274 MRPL53Q96EL3 112 aaKnown RBP5.82□□□□□ -1.48
UBR1-202ENST00000546274 C20orf173Q96LM9 149 aa5.82□□□□□ -1.48
UBR1-202ENST00000546274 GPHB5Q86YW7 130 aa5.82□□□□□ -1.48
UBR1-202ENST00000546274 C5orf56Q8N8D9 126 aa5.82□□□□□ -1.48
UBR1-202ENST00000546274 ITLN2Q8WWU7 325 aaPredicted RBP5.82□□□□□ -1.48
UBR1-202ENST00000546274 ZNF462Q96JM2 2506 aa5.81□□□□□ -1.48
UBR1-202ENST00000546274 IGIPA6NJ69 53 aa5.81□□□□□ -1.48
UBR1-202ENST00000546274 LINC00482Q8N8I6 264 aa5.81□□□□□ -1.48
UBR1-202ENST00000546274 LMO4P61968 165 aa5.81□□□□□ -1.48
UBR1-202ENST00000546274 SPTA1P02549 2419 aa5.81□□□□□ -1.48
UBR1-202ENST00000546274 CFAP46Q8IYW2 2715 aa5.81□□□□□ -1.48
UBR1-202ENST00000546274 TRAV12-2A0A075B6T6 113 aa5.81□□□□□ -1.48
UBR1-202ENST00000546274 A0A0J9YXV3 536 aa5.81□□□□□ -1.48
UBR1-202ENST00000546274 A0A0U1RRA0 63 aa5.81□□□□□ -1.48
UBR1-202ENST00000546274 DNAL4O96015 105 aa5.81□□□□□ -1.48
UBR1-202ENST00000546274 A8MZ25 164 aa5.8□□□□□ -1.48
UBR1-202ENST00000546274 RNF223E7ERA6 249 aa5.8□□□□□ -1.48
UBR1-202ENST00000546274 MED13LQ71F56 2210 aa5.8□□□□□ -1.48
UBR1-202ENST00000546274 UBR5O95071 2799 aaPredicted RBP5.8□□□□□ -1.48
UBR1-202ENST00000546274 HILS1P60008 231 aa5.8□□□□□ -1.48
UBR1-202ENST00000546274 ZNF876PQ49A33 203 aa5.8□□□□□ -1.48
UBR1-202ENST00000546274 Q9HAA7 133 aa5.8□□□□□ -1.48
UBR1-202ENST00000546274 LINC00474Q9P2X8 69 aa5.8□□□□□ -1.48
UBR1-202ENST00000546274 TRAV23DV6A0A075B6W5 121 aa5.79□□□□□ -1.48
UBR1-202ENST00000546274 F5H697 171 aa5.79□□□□□ -1.48
UBR1-202ENST00000546274 SOCS3O14543 225 aa5.79□□□□□ -1.48
UBR1-202ENST00000546274 UNQ9165/PRO28630Q6UXU0 137 aa5.79□□□□□ -1.48
UBR1-202ENST00000546274 PRIMA1Q86XR5 153 aa5.79□□□□□ -1.48
UBR1-202ENST00000546274 TMEM61Q8N0U2 210 aa5.79□□□□□ -1.48
UBR1-202ENST00000546274 ZFAND2AQ8N6M9 145 aa5.79□□□□□ -1.48
UBR1-202ENST00000546274 WFDC9Q8NEX5 89 aa5.79□□□□□ -1.48
UBR1-202ENST00000546274 PHLDA3Q9Y5J5 127 aa5.79□□□□□ -1.48
UBR1-202ENST00000546274 IGHV3OR16-10A0A075B7F0 116 aa5.79□□□□□ -1.48
UBR1-202ENST00000546274 GHRHP01286 108 aa5.79□□□□□ -1.48
UBR1-202ENST00000546274 TRBV12-3P01733 135 aa5.79□□□□□ -1.48
UBR1-202ENST00000546274 HOXD3P31249 432 aaPredicted RBP5.79□□□□□ -1.48
UBR1-202ENST00000546274 SS18Q15532 418 aa5.79□□□□□ -1.48
UBR1-202ENST00000546274 BPESC1Q9GZL8 116 aa5.79□□□□□ -1.48
UBR1-202ENST00000546274 NBASA2RRP1 2371 aa5.79□□□□□ -1.48
UBR1-202ENST00000546274 IGHV3-30-3P0DP02 117 aa5.79□□□□□ -1.48
UBR1-202ENST00000546274 DEFB1P60022 68 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms