RNA–Protein interactions for RNA: ENST00000545170.5

ATXN3-216, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 6,950 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-216ENST00000545170 FAM19A1Q7Z5A9 133 aa6.49□□□□□ -1.37
ATXN3-216ENST00000545170 RTTNQ86VV8 2226 aa6.48□□□□□ -1.37
ATXN3-216ENST00000545170 IGKV1D-37A0A075B6S9 117 aa6.48□□□□□ -1.37
ATXN3-216ENST00000545170 PLXNA4Q9HCM2 1894 aa6.48□□□□□ -1.37
ATXN3-216ENST00000545170 THADAQ6YHU6 1953 aa6.48□□□□□ -1.37
ATXN3-216ENST00000545170 IGLV1-44P01699 117 aa6.48□□□□□ -1.37
ATXN3-216ENST00000545170 ZMAT4Q9H898 229 aa6.48□□□□□ -1.37
ATXN3-216ENST00000545170 CTSZQ9UBR2 303 aa6.48□□□□□ -1.37
ATXN3-216ENST00000545170 RNF223E7ERA6 249 aa6.48□□□□□ -1.37
ATXN3-216ENST00000545170 CXCL6P80162 114 aa6.48□□□□□ -1.37
ATXN3-216ENST00000545170 PCDH15Q96QU1 1955 aa6.48□□□□□ -1.37
ATXN3-216ENST00000545170 CRIP1P50238 77 aa6.47□□□□□ -1.37
ATXN3-216ENST00000545170 Q8N6K4 173 aa6.47□□□□□ -1.37
ATXN3-216ENST00000545170 CCL24O00175 119 aa6.47□□□□□ -1.37
ATXN3-216ENST00000545170 K7ENP7 123 aa6.47□□□□□ -1.37
ATXN3-216ENST00000545170 SPART-AS1P0CW21 52 aa6.47□□□□□ -1.37
ATXN3-216ENST00000545170 XAGE1AQ9HD64 81 aa6.47□□□□□ -1.37
ATXN3-216ENST00000545170 PLAC8L1A1L4L8 177 aa6.46□□□□□ -1.37
ATXN3-216ENST00000545170 UBE2D3P61077 147 aa6.46□□□□□ -1.37
ATXN3-216ENST00000545170 UBE2D2P62837 147 aa6.46□□□□□ -1.37
ATXN3-216ENST00000545170 RPS28P62857 69 aaKnown RBP6.46□□□□□ -1.37
ATXN3-216ENST00000545170 HILS1P60008 231 aa6.46□□□□□ -1.38
ATXN3-216ENST00000545170 KRTAP27-1Q3LI81 207 aa6.46□□□□□ -1.38
ATXN3-216ENST00000545170 OXLD1Q5BKU9 147 aa6.46□□□□□ -1.38
ATXN3-216ENST00000545170 Q8N3U1 123 aa6.46□□□□□ -1.38
ATXN3-216ENST00000545170 TANC2Q9HCD6 1990 aa6.46□□□□□ -1.38
ATXN3-216ENST00000545170 REG3AQ06141 175 aa6.46□□□□□ -1.38
ATXN3-216ENST00000545170 LY6DQ14210 128 aa6.46□□□□□ -1.38
ATXN3-216ENST00000545170 F8W735 103 aaPredicted RBP6.46□□□□□ -1.38
ATXN3-216ENST00000545170 ZSWIM8A7E2V4 1837 aa6.46□□□□□ -1.38
ATXN3-216ENST00000545170 LINC00310P59036 64 aa6.46□□□□□ -1.38
ATXN3-216ENST00000545170 CHCHD10Q8WYQ3 142 aaPredicted RBP6.46□□□□□ -1.38
ATXN3-216ENST00000545170 SPAG11AQ6PDA7 123 aa6.45□□□□□ -1.38
ATXN3-216ENST00000545170 ZNF295-AS1Q8N0V1 137 aa6.45□□□□□ -1.38
ATXN3-216ENST00000545170 TMEM254Q8TBM7 123 aa6.45□□□□□ -1.38
ATXN3-216ENST00000545170 A0A087WYN8 130 aa6.45□□□□□ -1.38
ATXN3-216ENST00000545170 Q6ZSV7 163 aa6.45□□□□□ -1.38
ATXN3-216ENST00000545170 COL5A3P25940 1745 aaPredicted RBP6.45□□□□□ -1.38
ATXN3-216ENST00000545170 DOCK7Q96N67 2140 aa6.45□□□□□ -1.38
ATXN3-216ENST00000545170 CEP250Q9BV73 2442 aa6.44□□□□□ -1.38
ATXN3-216ENST00000545170 PLA2G2AP14555 144 aa6.44□□□□□ -1.38
ATXN3-216ENST00000545170 CCL18P55774 89 aa6.44□□□□□ -1.38
ATXN3-216ENST00000545170 LIMD2Q9BT23 127 aa6.44□□□□□ -1.38
ATXN3-216ENST00000545170 COL11A2P13942 1736 aaPredicted RBP6.44□□□□□ -1.38
ATXN3-216ENST00000545170 A0A087WZ39 114 aa6.44□□□□□ -1.38
ATXN3-216ENST00000545170 NTM-AS1Q6ZSK4 140 aa6.44□□□□□ -1.38
ATXN3-216ENST00000545170 IGKV2-24A0A0C4DH68 120 aa6.44□□□□□ -1.38
ATXN3-216ENST00000545170 A0A0J9YX75 114 aa6.44□□□□□ -1.38
ATXN3-216ENST00000545170 PCOTHQ58A44 107 aa6.44□□□□□ -1.38
ATXN3-216ENST00000545170 Q6ZSR3 168 aa6.43□□□□□ -1.38
ATXN3-216ENST00000545170 SDK2Q58EX2 2172 aa6.43□□□□□ -1.38
ATXN3-216ENST00000545170 DEFB4AO15263 64 aa6.43□□□□□ -1.38
ATXN3-216ENST00000545170 ZNF843Q8N446 348 aa6.43□□□□□ -1.38
ATXN3-216ENST00000545170 M0QY20 66 aa6.43□□□□□ -1.38
ATXN3-216ENST00000545170 SCN10AQ9Y5Y9 1956 aa6.43□□□□□ -1.38
ATXN3-216ENST00000545170 C5orf56Q8N8D9 126 aa6.43□□□□□ -1.38
ATXN3-216ENST00000545170 IGKV2-28A0A075B6P5 120 aa6.43□□□□□ -1.38
ATXN3-216ENST00000545170 IGKV2D-28P01615 120 aa6.43□□□□□ -1.38
ATXN3-216ENST00000545170 P0C879 139 aa6.43□□□□□ -1.38
ATXN3-216ENST00000545170 ZNF73O43830 326 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-216ENST00000545170 TSHBP01222 138 aa6.42□□□□□ -1.38
ATXN3-216ENST00000545170 UNQ9165/PRO28630Q6UXU0 137 aa6.42□□□□□ -1.38
ATXN3-216ENST00000545170 UBE2D1P51668 147 aa6.42□□□□□ -1.38
ATXN3-216ENST00000545170 SPINK6Q6UWN8 80 aa6.42□□□□□ -1.38
ATXN3-216ENST00000545170 H0Y9P7 68 aa6.42□□□□□ -1.38
ATXN3-216ENST00000545170 IGF1P05019 195 aa6.42□□□□□ -1.38
ATXN3-216ENST00000545170 Q8N814 137 aa6.42□□□□□ -1.38
ATXN3-216ENST00000545170 K7EMT4 169 aa6.41□□□□□ -1.38
ATXN3-216ENST00000545170 DHRS4-AS1Q9P1J3 65 aa6.41□□□□□ -1.38
ATXN3-216ENST00000545170 PROK1P58294 105 aa6.41□□□□□ -1.38
ATXN3-216ENST00000545170 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.41□□□□□ -1.38
ATXN3-216ENST00000545170 PLXNB3Q9ULL4 1909 aa6.41□□□□□ -1.38
ATXN3-216ENST00000545170 Q9UF83 564 aa6.41□□□□□ -1.38
ATXN3-216ENST00000545170 HCFC1P51610 2035 aa6.41□□□□□ -1.38
ATXN3-216ENST00000545170 GAS8-AS1O95177 125 aa6.41□□□□□ -1.38
ATXN3-216ENST00000545170 RPL28P46779 137 aaKnown RBP6.41□□□□□ -1.38
ATXN3-216ENST00000545170 COL4A5P29400 1685 aa6.41□□□□□ -1.38
ATXN3-216ENST00000545170 GTF3C1Q12789 2109 aa6.41□□□□□ -1.38
ATXN3-216ENST00000545170 URB1-AS1Q96HZ7 61 aa6.41□□□□□ -1.38
ATXN3-216ENST00000545170 UBE2D4Q9Y2X8 147 aa6.41□□□□□ -1.38
ATXN3-216ENST00000545170 TANC1Q9C0D5 1861 aa6.4□□□□□ -1.38
ATXN3-216ENST00000545170 Q6ZVQ6 151 aa6.4□□□□□ -1.38
ATXN3-216ENST00000545170 Q96MF0 132 aa6.4□□□□□ -1.38
ATXN3-216ENST00000545170 NCOR1O75376 2440 aa6.4□□□□□ -1.38
ATXN3-216ENST00000545170 PRO0255Q9UI72 69 aa6.4□□□□□ -1.38
ATXN3-216ENST00000545170 Q6ZTI0 123 aa6.4□□□□□ -1.39
ATXN3-216ENST00000545170 IGLV2-11P01706 119 aa6.4□□□□□ -1.39
ATXN3-216ENST00000545170 LINC01547P58512 204 aaPredicted RBP6.4□□□□□ -1.39
ATXN3-216ENST00000545170 MDFIQ99750 246 aa6.39□□□□□ -1.39
ATXN3-216ENST00000545170 LINC00846Q9NV44 126 aa6.39□□□□□ -1.39
ATXN3-216ENST00000545170 TNFRSF13BO14836 293 aaPredicted RBP6.39□□□□□ -1.39
ATXN3-216ENST00000545170 ZGRF1Q86YA3 2104 aa6.39□□□□□ -1.39
ATXN3-216ENST00000545170 M0R378 163 aa6.39□□□□□ -1.39
ATXN3-216ENST00000545170 RNASE3P12724 160 aaKnown RBP6.39□□□□□ -1.39
ATXN3-216ENST00000545170 EDN2P20800 178 aa6.39□□□□□ -1.39
ATXN3-216ENST00000545170 ODF3Q96PU9 254 aa6.39□□□□□ -1.39
ATXN3-216ENST00000545170 WDR90Q96KV7 1748 aa6.39□□□□□ -1.39
ATXN3-216ENST00000545170 TICRRQ7Z2Z1 1910 aa6.39□□□□□ -1.39
ATXN3-216ENST00000545170 TCF20Q9UGU0 1960 aaKnown RBP6.39□□□□□ -1.39
ATXN3-216ENST00000545170 TMEM89A2RUT3 159 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 131.9 ms