RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 MAPKAPK5-AS1Q8N8E1 139 aa10.42□□□□□ -0.74
CCDC78-216ENST00000544996 BAALCQ8WXS3 180 aa10.42□□□□□ -0.74
CCDC78-216ENST00000544996 RPL39LQ96EH5 51 aaKnown RBP10.42□□□□□ -0.74
CCDC78-216ENST00000544996 LINC00269Q8N2A0 174 aa10.41□□□□□ -0.74
CCDC78-216ENST00000544996 DEFB104AQ8WTQ1 72 aa10.41□□□□□ -0.74
CCDC78-216ENST00000544996 SDHAF1A6NFY7 115 aa10.4□□□□□ -0.74
CCDC78-216ENST00000544996 KRTAP10-1P60331 282 aa10.4□□□□□ -0.74
CCDC78-216ENST00000544996 WFDC2Q14508 124 aa10.4□□□□□ -0.74
CCDC78-216ENST00000544996 LRP1BQ9NZR2 4599 aa10.39□□□□□ -0.75
CCDC78-216ENST00000544996 A0A1B0GUV1 79 aa10.39□□□□□ -0.75
CCDC78-216ENST00000544996 SMIM27A0A1W2PRY6 76 aa10.39□□□□□ -0.75
CCDC78-216ENST00000544996 NCR2O95944 276 aa10.39□□□□□ -0.75
CCDC78-216ENST00000544996 SLC7A5P1Q8MH63 180 aa10.39□□□□□ -0.75
CCDC78-216ENST00000544996 MRAP2Q96G30 205 aa10.39□□□□□ -0.75
CCDC78-216ENST00000544996 ST20Q9HBF5 79 aa10.39□□□□□ -0.75
CCDC78-216ENST00000544996 PRR34Q9NV39 138 aa10.39□□□□□ -0.75
CCDC78-216ENST00000544996 TRBV6-5A0A0K0K1A5 114 aa10.38□□□□□ -0.75
CCDC78-216ENST00000544996 I3L3M4 83 aa10.38□□□□□ -0.75
CCDC78-216ENST00000544996 RAB4AP20338 218 aa10.38□□□□□ -0.75
CCDC78-216ENST00000544996 REG3AQ06141 175 aa10.38□□□□□ -0.75
CCDC78-216ENST00000544996 CLPSL2Q6UWE3 100 aa10.38□□□□□ -0.75
CCDC78-216ENST00000544996 AMN1Q8IY45 258 aa10.38□□□□□ -0.75
CCDC78-216ENST00000544996 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.37□□□□□ -0.75
CCDC78-216ENST00000544996 A0A1B0GW15 77 aa10.37□□□□□ -0.75
CCDC78-216ENST00000544996 APCSP02743 223 aa10.37□□□□□ -0.75
CCDC78-216ENST00000544996 PMCHP20382 165 aa10.37□□□□□ -0.75
CCDC78-216ENST00000544996 C14orf177Q52M58 125 aa10.37□□□□□ -0.75
CCDC78-216ENST00000544996 RNF185Q96GF1 192 aa10.37□□□□□ -0.75
CCDC78-216ENST00000544996 PPP1R17O96001 155 aa10.36□□□□□ -0.75
CCDC78-216ENST00000544996 HLA-DQA1P01909 254 aa10.36□□□□□ -0.75
CCDC78-216ENST00000544996 CLLU1Q5K131 121 aa10.36□□□□□ -0.75
CCDC78-216ENST00000544996 AMMECR1LQ6DCA0 310 aa10.36□□□□□ -0.75
CCDC78-216ENST00000544996 C20orf203Q8NBC4 194 aa10.36□□□□□ -0.75
CCDC78-216ENST00000544996 IGLV4-60A0A075B6I1 120 aa10.35□□□□□ -0.75
CCDC78-216ENST00000544996 TRAV8-4A0A0B4J246 113 aa10.35□□□□□ -0.75
CCDC78-216ENST00000544996 H7C423 109 aa10.35□□□□□ -0.75
CCDC78-216ENST00000544996 CAMPP49913 170 aa10.35□□□□□ -0.75
CCDC78-216ENST00000544996 Q8N1X5 172 aa10.35□□□□□ -0.75
CCDC78-216ENST00000544996 PPP1R2P9O14990 202 aa10.34□□□□□ -0.75
CCDC78-216ENST00000544996 GAS8-AS1O95177 125 aa10.34□□□□□ -0.75
CCDC78-216ENST00000544996 S100A8P05109 93 aa10.34□□□□□ -0.75
CCDC78-216ENST00000544996 PNRC1Q12796 327 aaPredicted RBP10.34□□□□□ -0.75
CCDC78-216ENST00000544996 TMEM70Q9BUB7 260 aa10.34□□□□□ -0.75
CCDC78-216ENST00000544996 IGLV10-54A0A075B6I4 117 aa10.33□□□□□ -0.76
CCDC78-216ENST00000544996 RPS10P46783 165 aaKnown RBP10.33□□□□□ -0.76
CCDC78-216ENST00000544996 FAM104BQ5XKR9 115 aa10.33□□□□□ -0.76
CCDC78-216ENST00000544996 RNASEKQ6P5S7 137 aaKnown RBP10.33□□□□□ -0.76
CCDC78-216ENST00000544996 DNAH5Q8TE73 4624 aa10.32□□□□□ -0.76
CCDC78-216ENST00000544996 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.32□□□□□ -0.76
CCDC78-216ENST00000544996 IGKV2-29A2NJV5 120 aaPredicted RBP10.32□□□□□ -0.76
CCDC78-216ENST00000544996 F8W036 122 aa10.32□□□□□ -0.76
CCDC78-216ENST00000544996 SMKR1H3BMG3 65 aa10.32□□□□□ -0.76
CCDC78-216ENST00000544996 VCYO14598 125 aa10.32□□□□□ -0.76
CCDC78-216ENST00000544996 POLR2KP53803 58 aaKnown RBP10.32□□□□□ -0.76
CCDC78-216ENST00000544996 XGP55808 180 aa10.32□□□□□ -0.76
CCDC78-216ENST00000544996 HBBP68871 147 aa10.32□□□□□ -0.76
CCDC78-216ENST00000544996 MRPL54Q6P161 138 aaKnown RBP10.32□□□□□ -0.76
CCDC78-216ENST00000544996 TMEM242Q9NWH2 141 aa10.32□□□□□ -0.76
CCDC78-216ENST00000544996 HSPG2P98160 4391 aa10.32□□□□□ -0.76
CCDC78-216ENST00000544996 TRBV27A0A0K0K1C4 114 aa10.31□□□□□ -0.76
CCDC78-216ENST00000544996 LINC00862A6NCI5 91 aa10.31□□□□□ -0.76
CCDC78-216ENST00000544996 USP17L23D6RBM5 183 aa10.31□□□□□ -0.76
CCDC78-216ENST00000544996 TSHBP01222 138 aa10.31□□□□□ -0.76
CCDC78-216ENST00000544996 MT-ND4LP03901 98 aa10.31□□□□□ -0.76
CCDC78-216ENST00000544996 FGF6P10767 208 aa10.31□□□□□ -0.76
CCDC78-216ENST00000544996 ZNF25P17030 456 aaPredicted RBP10.31□□□□□ -0.76
CCDC78-216ENST00000544996 SUMO2P61956 95 aaKnown RBP10.31□□□□□ -0.76
CCDC78-216ENST00000544996 MRPL51Q4U2R6 128 aaKnown RBP10.31□□□□□ -0.76
CCDC78-216ENST00000544996 BTF3L4Q96K17 158 aa10.31□□□□□ -0.76
CCDC78-216ENST00000544996 RYR1P21817 5038 aa10.31□□□□□ -0.76
CCDC78-216ENST00000544996 FCER1GP30273 86 aa10.3□□□□□ -0.76
CCDC78-216ENST00000544996 CKS2P33552 79 aa10.3□□□□□ -0.76
CCDC78-216ENST00000544996 KRTAP26-1Q6PEX3 210 aa10.3□□□□□ -0.76
CCDC78-216ENST00000544996 NRACQ8N912 160 aa10.3□□□□□ -0.76
CCDC78-216ENST00000544996 ANAPC16Q96DE5 110 aa10.3□□□□□ -0.76
CCDC78-216ENST00000544996 TMEM101Q96IK0 257 aa10.3□□□□□ -0.76
CCDC78-216ENST00000544996 KIR2DL4Q99706 377 aa10.3□□□□□ -0.76
CCDC78-216ENST00000544996 IGKV3OR2-268A0A0C4DH90 116 aa10.29□□□□□ -0.76
CCDC78-216ENST00000544996 ESDP10768 282 aa10.29□□□□□ -0.76
CCDC78-216ENST00000544996 ATP5L2Q7Z4Y8 100 aa10.29□□□□□ -0.76
CCDC78-216ENST00000544996 KRTAP4-5Q9BYR2 181 aa10.29□□□□□ -0.76
CCDC78-216ENST00000544996 APOBP04114 4563 aaKnown RBP10.28□□□□□ -0.76
CCDC78-216ENST00000544996 A0A1B0GXF2 115 aa10.28□□□□□ -0.76
CCDC78-216ENST00000544996 C7orf77A4D0Y5 90 aa10.28□□□□□ -0.76
CCDC78-216ENST00000544996 UQCC3Q6UW78 93 aa10.28□□□□□ -0.76
CCDC78-216ENST00000544996 CLRN3Q8NCR9 226 aa10.28□□□□□ -0.76
CCDC78-216ENST00000544996 OR5A1Q8NGJ0 315 aa10.28□□□□□ -0.76
CCDC78-216ENST00000544996 C20orf78Q9BR46 151 aa10.28□□□□□ -0.76
CCDC78-216ENST00000544996 KRTAP17-1Q9BYP8 105 aa10.28□□□□□ -0.76
CCDC78-216ENST00000544996 EPM2AB3EWF7 344 aa10.27□□□□□ -0.77
CCDC78-216ENST00000544996 PRSS1P07477 247 aa10.27□□□□□ -0.77
CCDC78-216ENST00000544996 SMAGPQ0VAQ4 97 aa10.27□□□□□ -0.77
CCDC78-216ENST00000544996 LINC01620Q4KN68 170 aa10.27□□□□□ -0.77
CCDC78-216ENST00000544996 TRBV24-1A0A075B6N3 115 aa10.26□□□□□ -0.77
CCDC78-216ENST00000544996 PPBPP02775 128 aa10.26□□□□□ -0.77
CCDC78-216ENST00000544996 DGAT2L7PQ6IED9 249 aa10.26□□□□□ -0.77
CCDC78-216ENST00000544996 FAM30AQ9NZY2 134 aa10.26□□□□□ -0.77
CCDC78-216ENST00000544996 D6R8Y8 96 aa10.25□□□□□ -0.77
CCDC78-216ENST00000544996 TCAPO15273 167 aa10.25□□□□□ -0.77
CCDC78-216ENST00000544996 TNFRSF6BO95407 300 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms