RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 RASL11AQ6T310 242 aa4.94□□□□□ -1.62
CPSF7-224ENST00000544990 LINC01551Q86U37 167 aa4.94□□□□□ -1.62
CPSF7-224ENST00000544990 C15orf54Q8N8G6 183 aa4.94□□□□□ -1.62
CPSF7-224ENST00000544990 RMI2Q96E14 147 aa4.94□□□□□ -1.62
CPSF7-224ENST00000544990 OSTCQ9NRP0 149 aa4.94□□□□□ -1.62
CPSF7-224ENST00000544990 DNAH17Q9UFH2 4485 aa4.94□□□□□ -1.62
CPSF7-224ENST00000544990 DNAH2Q9P225 4427 aa4.94□□□□□ -1.62
CPSF7-224ENST00000544990 TRBV25-1A0A075B6N4 114 aa4.93□□□□□ -1.62
CPSF7-224ENST00000544990 A0A0A0MQY5 61 aa4.93□□□□□ -1.62
CPSF7-224ENST00000544990 FAM231BA6NCW3 169 aa4.93□□□□□ -1.62
CPSF7-224ENST00000544990 FOXA3P55318 350 aaPredicted RBP4.93□□□□□ -1.62
CPSF7-224ENST00000544990 GTSF1Q8WW33 167 aa4.93□□□□□ -1.62
CPSF7-224ENST00000544990 FRZBQ92765 325 aa4.93□□□□□ -1.62
CPSF7-224ENST00000544990 PGLYRP4Q96LB8 373 aa4.93□□□□□ -1.62
CPSF7-224ENST00000544990 CHCHD5Q9BSY4 110 aa4.93□□□□□ -1.62
CPSF7-224ENST00000544990 KRTAP9-9Q9BYP9 154 aa4.93□□□□□ -1.62
CPSF7-224ENST00000544990 KRTAP9-4Q9BYQ2 154 aa4.93□□□□□ -1.62
CPSF7-224ENST00000544990 GFRA4Q9GZZ7 299 aa4.93□□□□□ -1.62
CPSF7-224ENST00000544990 NIT2Q9NQR4 276 aa4.93□□□□□ -1.62
CPSF7-224ENST00000544990 KLK12Q9UKR0 248 aa4.93□□□□□ -1.62
CPSF7-224ENST00000544990 HECTD4Q9Y4D8 3996 aa4.92□□□□□ -1.62
CPSF7-224ENST00000544990 RAB14P61106 215 aa4.92□□□□□ -1.62
CPSF7-224ENST00000544990 Q0VG73 95 aa4.92□□□□□ -1.62
CPSF7-224ENST00000544990 TSKUQ8WUA8 353 aa4.92□□□□□ -1.62
CPSF7-224ENST00000544990 UBE2WQ96B02 151 aa4.92□□□□□ -1.62
CPSF7-224ENST00000544990 NAT8Q9UHE5 227 aa4.92□□□□□ -1.62
CPSF7-224ENST00000544990 FAT2Q9NYQ8 4349 aa4.92□□□□□ -1.62
CPSF7-224ENST00000544990 IGKV2D-24A0A075B6R9 120 aa4.91□□□□□ -1.62
CPSF7-224ENST00000544990 IGHV1-24A0A0C4DH33 117 aa4.91□□□□□ -1.62
CPSF7-224ENST00000544990 A0A1B0GUT8 65 aa4.91□□□□□ -1.62
CPSF7-224ENST00000544990 LRCOL1A6NCL2 159 aa4.91□□□□□ -1.62
CPSF7-224ENST00000544990 HIGD1CA8MV81 97 aa4.91□□□□□ -1.62
CPSF7-224ENST00000544990 USP17L23D6RBM5 183 aa4.91□□□□□ -1.62
CPSF7-224ENST00000544990 CDK2AP2O75956 126 aa4.91□□□□□ -1.62
CPSF7-224ENST00000544990 CRPP02741 224 aa4.91□□□□□ -1.62
CPSF7-224ENST00000544990 RPL23P62829 140 aaKnown RBP4.91□□□□□ -1.62
CPSF7-224ENST00000544990 ADIRFQ15847 76 aa4.91□□□□□ -1.62
CPSF7-224ENST00000544990 IQCJQ1A5X6 159 aa4.91□□□□□ -1.62
CPSF7-224ENST00000544990 NTM-AS1Q6ZSK4 140 aa4.91□□□□□ -1.62
CPSF7-224ENST00000544990 NTN5Q8WTR8 489 aaPredicted RBP4.91□□□□□ -1.62
CPSF7-224ENST00000544990 ISOC2Q96AB3 205 aa4.91□□□□□ -1.62
CPSF7-224ENST00000544990 C9JQL5 133 aa4.9□□□□□ -1.63
CPSF7-224ENST00000544990 ANGP03950 147 aaKnown RBP4.9□□□□□ -1.63
CPSF7-224ENST00000544990 GAGE6Q13070 117 aa4.9□□□□□ -1.63
CPSF7-224ENST00000544990 RIGQ13278 110 aa4.9□□□□□ -1.63
CPSF7-224ENST00000544990 COTL1Q14019 142 aa4.9□□□□□ -1.63
CPSF7-224ENST00000544990 KRTAP15-1Q3LI76 137 aa4.9□□□□□ -1.63
CPSF7-224ENST00000544990 MPV17L2Q567V2 206 aa4.9□□□□□ -1.63
CPSF7-224ENST00000544990 ATRAIDQ6UW56 229 aa4.9□□□□□ -1.63
CPSF7-224ENST00000544990 GATD1Q8NB37 220 aa4.9□□□□□ -1.63
CPSF7-224ENST00000544990 MPLKIPQ8TAP9 179 aa4.9□□□□□ -1.63
CPSF7-224ENST00000544990 TMEM243Q9BU79 118 aa4.9□□□□□ -1.63
CPSF7-224ENST00000544990 NAT8BQ9UHF3 227 aa4.9□□□□□ -1.63
CPSF7-224ENST00000544990 V9GYV3 84 aa4.9□□□□□ -1.63
CPSF7-224ENST00000544990 PKD1P98161 4303 aa4.9□□□□□ -1.63
CPSF7-224ENST00000544990 IGLV5-52A0A0A0MRZ9 124 aa4.89□□□□□ -1.63
CPSF7-224ENST00000544990 TRAV26-2A0A0B4J265 109 aa4.89□□□□□ -1.63
CPSF7-224ENST00000544990 UBE2L6O14933 153 aa4.89□□□□□ -1.63
CPSF7-224ENST00000544990 AMTP48728 403 aa4.89□□□□□ -1.63
CPSF7-224ENST00000544990 Q8N814 137 aa4.89□□□□□ -1.63
CPSF7-224ENST00000544990 Q8N976 141 aa4.89□□□□□ -1.63
CPSF7-224ENST00000544990 NUP35Q8NFH5 326 aa4.89□□□□□ -1.63
CPSF7-224ENST00000544990 TMEM191AQ9H0A3 160 aa4.89□□□□□ -1.63
CPSF7-224ENST00000544990 A0A1B0GUV1 79 aa4.88□□□□□ -1.63
CPSF7-224ENST00000544990 PRSS47A8MTI9 375 aa4.88□□□□□ -1.63
CPSF7-224ENST00000544990 NCR2O95944 276 aa4.88□□□□□ -1.63
CPSF7-224ENST00000544990 FUSP35637 526 aaKnown RBP eCLIP4.88□□□□□ -1.63
CPSF7-224ENST00000544990 RBX1P62877 108 aa4.88□□□□□ -1.63
CPSF7-224ENST00000544990 MIAQ16674 131 aa4.88□□□□□ -1.63
CPSF7-224ENST00000544990 ENHOQ6UWT2 76 aa4.88□□□□□ -1.63
CPSF7-224ENST00000544990 BAALCQ8WXS3 180 aa4.88□□□□□ -1.63
CPSF7-224ENST00000544990 RPL39LQ96EH5 51 aaKnown RBP4.88□□□□□ -1.63
CPSF7-224ENST00000544990 PCLOQ9Y6V0 5065 aa4.88□□□□□ -1.63
CPSF7-224ENST00000544990 HERC2O95714 4834 aa4.88□□□□□ -1.63
CPSF7-224ENST00000544990 TRBV6-5A0A0K0K1A5 114 aa4.87□□□□□ -1.63
CPSF7-224ENST00000544990 A0A1B0GW15 77 aa4.87□□□□□ -1.63
CPSF7-224ENST00000544990 SMIM27A0A1W2PRY6 76 aa4.87□□□□□ -1.63
CPSF7-224ENST00000544990 SDHAF1A6NFY7 115 aa4.87□□□□□ -1.63
CPSF7-224ENST00000544990 I3L3M4 83 aa4.87□□□□□ -1.63
CPSF7-224ENST00000544990 LECT2O14960 151 aa4.87□□□□□ -1.63
CPSF7-224ENST00000544990 PPP1R17O96001 155 aa4.87□□□□□ -1.63
CPSF7-224ENST00000544990 RAB4AP20338 218 aa4.87□□□□□ -1.63
CPSF7-224ENST00000544990 PMCHP20382 165 aa4.87□□□□□ -1.63
CPSF7-224ENST00000544990 C14orf177Q52M58 125 aa4.87□□□□□ -1.63
CPSF7-224ENST00000544990 C10orf25Q5T742 122 aa4.87□□□□□ -1.63
CPSF7-224ENST00000544990 LINC00269Q8N2A0 174 aa4.87□□□□□ -1.63
CPSF7-224ENST00000544990 MAPKAPK5-AS1Q8N8E1 139 aa4.87□□□□□ -1.63
CPSF7-224ENST00000544990 MRAP2Q96G30 205 aa4.87□□□□□ -1.63
CPSF7-224ENST00000544990 ST20Q9HBF5 79 aa4.87□□□□□ -1.63
CPSF7-224ENST00000544990 PRR34Q9NV39 138 aa4.87□□□□□ -1.63
CPSF7-224ENST00000544990 TRAV8-4A0A0B4J246 113 aa4.86□□□□□ -1.63
CPSF7-224ENST00000544990 H7C423 109 aa4.86□□□□□ -1.63
CPSF7-224ENST00000544990 PPP1R2P9O14990 202 aa4.86□□□□□ -1.63
CPSF7-224ENST00000544990 APCSP02743 223 aa4.86□□□□□ -1.63
CPSF7-224ENST00000544990 S100A8P05109 93 aa4.86□□□□□ -1.63
CPSF7-224ENST00000544990 REG3AQ06141 175 aa4.86□□□□□ -1.63
CPSF7-224ENST00000544990 PNRC1Q12796 327 aaPredicted RBP4.86□□□□□ -1.63
CPSF7-224ENST00000544990 WFDC2Q14508 124 aa4.86□□□□□ -1.63
CPSF7-224ENST00000544990 CLLU1Q5K131 121 aa4.86□□□□□ -1.63
CPSF7-224ENST00000544990 AMMECR1LQ6DCA0 310 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms