RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 D6R8Y8 96 aa8.47□□□□□ -1.05
ACTN1-206ENST00000544964 CKS2P33552 79 aa8.47□□□□□ -1.05
ACTN1-206ENST00000544964 TIRAPP58753 221 aa8.46□□□□□ -1.06
ACTN1-206ENST00000544964 WFDC10BQ8IUB3 73 aa8.46□□□□□ -1.06
ACTN1-206ENST00000544964 NRACQ8N912 160 aa8.46□□□□□ -1.06
ACTN1-206ENST00000544964 ST20Q9HBF5 79 aa8.46□□□□□ -1.06
ACTN1-206ENST00000544964 DMBT1Q9UGM3 2413 aaPredicted RBP8.45□□□□□ -1.06
ACTN1-206ENST00000544964 SDHAF1A6NFY7 115 aa8.45□□□□□ -1.06
ACTN1-206ENST00000544964 LELP1Q5T871 98 aa8.45□□□□□ -1.06
ACTN1-206ENST00000544964 DAZ4Q86SG3 579 aaKnown RBP8.45□□□□□ -1.06
ACTN1-206ENST00000544964 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.45□□□□□ -1.06
ACTN1-206ENST00000544964 YPEL4Q96NS1 127 aa8.45□□□□□ -1.06
ACTN1-206ENST00000544964 DAZ3Q9NR90 486 aaKnown RBP8.45□□□□□ -1.06
ACTN1-206ENST00000544964 SMCO4Q9NRQ5 59 aa8.45□□□□□ -1.06
ACTN1-206ENST00000544964 TRBV24-1A0A075B6N3 115 aa8.44□□□□□ -1.06
ACTN1-206ENST00000544964 TRBV6-5A0A0K0K1A5 114 aa8.44□□□□□ -1.06
ACTN1-206ENST00000544964 SCO1O75880 301 aa8.44□□□□□ -1.06
ACTN1-206ENST00000544964 TNFRSF6BO95407 300 aa8.44□□□□□ -1.06
ACTN1-206ENST00000544964 NPYP01303 97 aa8.44□□□□□ -1.06
ACTN1-206ENST00000544964 CTAG1AP78358 180 aa8.44□□□□□ -1.06
ACTN1-206ENST00000544964 KIAA1644Q3SXP7 199 aa8.44□□□□□ -1.06
ACTN1-206ENST00000544964 CFAP161Q6P656 301 aa8.44□□□□□ -1.06
ACTN1-206ENST00000544964 NTM-AS1Q6ZSK4 140 aa8.44□□□□□ -1.06
ACTN1-206ENST00000544964 ORMDL3Q8N138 153 aa8.44□□□□□ -1.06
ACTN1-206ENST00000544964 GNB1LQ9BYB4 327 aa8.44□□□□□ -1.06
ACTN1-206ENST00000544964 TRBV6-8A0A0A6YYG3 113 aa8.43□□□□□ -1.06
ACTN1-206ENST00000544964 TRAV8-6A0A0B4J262 113 aa8.43□□□□□ -1.06
ACTN1-206ENST00000544964 SIVA1O15304 175 aa8.43□□□□□ -1.06
ACTN1-206ENST00000544964 ATP6V1G1O75348 118 aa8.43□□□□□ -1.06
ACTN1-206ENST00000544964 PPP1R17O96001 155 aa8.43□□□□□ -1.06
ACTN1-206ENST00000544964 HLA-DQA1P01909 254 aa8.43□□□□□ -1.06
ACTN1-206ENST00000544964 APCSP02743 223 aa8.43□□□□□ -1.06
ACTN1-206ENST00000544964 PPBPP02775 128 aa8.43□□□□□ -1.06
ACTN1-206ENST00000544964 COX19Q49B96 90 aa8.43□□□□□ -1.06
ACTN1-206ENST00000544964 PRELID3AQ96N28 172 aa8.43□□□□□ -1.06
ACTN1-206ENST00000544964 TMEM70Q9BUB7 260 aa8.43□□□□□ -1.06
ACTN1-206ENST00000544964 MRPL18Q9H0U6 180 aaKnown RBP8.43□□□□□ -1.06
ACTN1-206ENST00000544964 PMCHP20382 165 aa8.42□□□□□ -1.06
ACTN1-206ENST00000544964 POLR2KP53803 58 aaKnown RBP8.42□□□□□ -1.06
ACTN1-206ENST00000544964 SUMO2P61956 95 aaKnown RBP8.42□□□□□ -1.06
ACTN1-206ENST00000544964 MYCBP2O75592 4640 aa8.41□□□□□ -1.06
ACTN1-206ENST00000544964 I3L3M4 83 aa8.41□□□□□ -1.06
ACTN1-206ENST00000544964 MT-ND6P03923 174 aa8.41□□□□□ -1.06
ACTN1-206ENST00000544964 FUSP35637 526 aaKnown RBP eCLIP8.41□□□□□ -1.06
ACTN1-206ENST00000544964 FABP9Q0Z7S8 132 aa8.41□□□□□ -1.06
ACTN1-206ENST00000544964 COTL1Q14019 142 aa8.41□□□□□ -1.06
ACTN1-206ENST00000544964 TMEM97Q5BJF2 176 aa8.41□□□□□ -1.06
ACTN1-206ENST00000544964 Q8N3U1 123 aa8.41□□□□□ -1.06
ACTN1-206ENST00000544964 TRAPPC1Q9Y5R8 145 aa8.41□□□□□ -1.06
ACTN1-206ENST00000544964 TRBV25-1A0A075B6N4 114 aa8.4□□□□□ -1.06
ACTN1-206ENST00000544964 IGHV1-24A0A0C4DH33 117 aa8.4□□□□□ -1.06
ACTN1-206ENST00000544964 TRBV27A0A0K0K1C4 114 aa8.4□□□□□ -1.06
ACTN1-206ENST00000544964 VCYO14598 125 aa8.4□□□□□ -1.06
ACTN1-206ENST00000544964 TSHBP01222 138 aa8.4□□□□□ -1.06
ACTN1-206ENST00000544964 IGHV3-30P01768 117 aa8.4□□□□□ -1.06
ACTN1-206ENST00000544964 IGHV3-33P01772 117 aa8.4□□□□□ -1.06
ACTN1-206ENST00000544964 IGHV3-30-3P0DP02 117 aa8.4□□□□□ -1.06
ACTN1-206ENST00000544964 IGHV3-30-5P0DP03 117 aa8.4□□□□□ -1.06
ACTN1-206ENST00000544964 C20orf78Q9BR46 151 aa8.4□□□□□ -1.06
ACTN1-206ENST00000544964 CHCHD5Q9BSY4 110 aa8.4□□□□□ -1.06
ACTN1-206ENST00000544964 LOC389332A0A1B0GUA5 103 aa8.39□□□□□ -1.07
ACTN1-206ENST00000544964 PHOX2AO14813 284 aa8.39□□□□□ -1.07
ACTN1-206ENST00000544964 DNAH10OSP0CZ25 163 aa8.39□□□□□ -1.07
ACTN1-206ENST00000544964 S100A1P23297 94 aa8.39□□□□□ -1.07
ACTN1-206ENST00000544964 AMTP48728 403 aa8.39□□□□□ -1.07
ACTN1-206ENST00000544964 GAGE6Q13070 117 aa8.39□□□□□ -1.07
ACTN1-206ENST00000544964 IQCJQ1A5X6 159 aa8.39□□□□□ -1.07
ACTN1-206ENST00000544964 FLG2Q5D862 2391 aaPredicted RBP8.39□□□□□ -1.07
ACTN1-206ENST00000544964 TMEM262E9PQX1 116 aa8.38□□□□□ -1.07
ACTN1-206ENST00000544964 NIT1Q86X76 327 aa8.38□□□□□ -1.07
ACTN1-206ENST00000544964 ALKBH7Q9BT30 221 aaPredicted RBP8.38□□□□□ -1.07
ACTN1-206ENST00000544964 TMEM243Q9BU79 118 aa8.38□□□□□ -1.07
ACTN1-206ENST00000544964 SMIM2Q9BVW6 85 aa8.38□□□□□ -1.07
ACTN1-206ENST00000544964 LAMTOR2Q9Y2Q5 125 aa8.38□□□□□ -1.07
ACTN1-206ENST00000544964 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.37□□□□□ -1.07
ACTN1-206ENST00000544964 IGKV2-29A2NJV5 120 aaPredicted RBP8.37□□□□□ -1.07
ACTN1-206ENST00000544964 COLCA2A8K830 154 aa8.37□□□□□ -1.07
ACTN1-206ENST00000544964 FCER1GP30273 86 aa8.37□□□□□ -1.07
ACTN1-206ENST00000544964 XGP55808 180 aa8.37□□□□□ -1.07
ACTN1-206ENST00000544964 RPL32P62910 135 aaKnown RBP8.37□□□□□ -1.07
ACTN1-206ENST00000544964 LINC01556Q5JQF7 62 aa8.37□□□□□ -1.07
ACTN1-206ENST00000544964 CDPF1Q6NVV7 123 aa8.37□□□□□ -1.07
ACTN1-206ENST00000544964 CHCHD7Q9BUK0 85 aa8.37□□□□□ -1.07
ACTN1-206ENST00000544964 MAP1LC3AQ9H492 121 aa8.37□□□□□ -1.07
ACTN1-206ENST00000544964 A0A087WX48 190 aa8.36□□□□□ -1.07
ACTN1-206ENST00000544964 UBE2L6O14933 153 aa8.36□□□□□ -1.07
ACTN1-206ENST00000544964 TCAPO15273 167 aa8.36□□□□□ -1.07
ACTN1-206ENST00000544964 MPV17L2Q567V2 206 aa8.36□□□□□ -1.07
ACTN1-206ENST00000544964 KIR2DL4Q99706 377 aa8.36□□□□□ -1.07
ACTN1-206ENST00000544964 PGPEP1Q9NXJ5 209 aa8.36□□□□□ -1.07
ACTN1-206ENST00000544964 TRAV9-2A0A087WT02 112 aa8.35□□□□□ -1.07
ACTN1-206ENST00000544964 A0A087WTM6 91 aa8.35□□□□□ -1.07
ACTN1-206ENST00000544964 ESDP10768 282 aa8.35□□□□□ -1.07
ACTN1-206ENST00000544964 Q8N8P6 123 aa8.35□□□□□ -1.07
ACTN1-206ENST00000544964 Q8N976 141 aa8.35□□□□□ -1.07
ACTN1-206ENST00000544964 SRRM2Q9UQ35 2752 aaKnown RBP8.34□□□□□ -1.07
ACTN1-206ENST00000544964 VPS13BQ7Z7G8 4022 aa8.34□□□□□ -1.07
ACTN1-206ENST00000544964 EPM2AB3EWF7 344 aa8.34□□□□□ -1.07
ACTN1-206ENST00000544964 RAB5AP20339 215 aa8.34□□□□□ -1.07
ACTN1-206ENST00000544964 IFI27P40305 119 aaPredicted RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms