RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 CIRBPQ14011 172 aaKnown RBP8.19□□□□□ -1.1
USP28-212ENST00000544750 DGAT2L7PQ6IED9 249 aa8.19□□□□□ -1.1
USP28-212ENST00000544750 WDR73Q6P4I2 378 aa8.19□□□□□ -1.1
USP28-212ENST00000544750 SDIM1Q6ZPB5 146 aa8.19□□□□□ -1.1
USP28-212ENST00000544750 C1orf43Q9BWL3 253 aa8.19□□□□□ -1.1
USP28-212ENST00000544750 F5H697 171 aa8.18□□□□□ -1.1
USP28-212ENST00000544750 M0QY20 66 aa8.18□□□□□ -1.1
USP28-212ENST00000544750 MGPP08493 103 aa8.18□□□□□ -1.1
USP28-212ENST00000544750 SMIM17P0DL12 118 aa8.18□□□□□ -1.1
USP28-212ENST00000544750 CT83Q5H943 113 aa8.18□□□□□ -1.1
USP28-212ENST00000544750 SUMO4Q6EEV6 95 aa8.18□□□□□ -1.1
USP28-212ENST00000544750 TRGC1P0CF51 173 aa8.17□□□□□ -1.1
USP28-212ENST00000544750 KRTAP26-1Q6PEX3 210 aa8.17□□□□□ -1.1
USP28-212ENST00000544750 DPH3P1Q9H4G8 78 aa8.17□□□□□ -1.1
USP28-212ENST00000544750 OSTCQ9NRP0 149 aa8.17□□□□□ -1.1
USP28-212ENST00000544750 A8MWL6 223 aa8.16□□□□□ -1.1
USP28-212ENST00000544750 FOXA3P55318 350 aaPredicted RBP8.16□□□□□ -1.1
USP28-212ENST00000544750 RPL23P62829 140 aaKnown RBP8.16□□□□□ -1.1
USP28-212ENST00000544750 NTM-AS1Q6ZSK4 140 aa8.16□□□□□ -1.1
USP28-212ENST00000544750 ISOC2Q96AB3 205 aa8.16□□□□□ -1.1
USP28-212ENST00000544750 V9GYV3 84 aa8.16□□□□□ -1.1
USP28-212ENST00000544750 TRBV6-8A0A0A6YYG3 113 aa8.15□□□□□ -1.1
USP28-212ENST00000544750 PEA15Q15121 130 aa8.15□□□□□ -1.1
USP28-212ENST00000544750 TWIST1Q15672 202 aa8.15□□□□□ -1.1
USP28-212ENST00000544750 TMEM241Q24JQ0 296 aa8.15□□□□□ -1.1
USP28-212ENST00000544750 FAM74A3Q4VXF1 159 aa8.15□□□□□ -1.1
USP28-212ENST00000544750 MPV17L2Q567V2 206 aa8.15□□□□□ -1.1
USP28-212ENST00000544750 PGLYRP4Q96LB8 373 aa8.15□□□□□ -1.1
USP28-212ENST00000544750 SMDT1Q9H4I9 107 aa8.15□□□□□ -1.1
USP28-212ENST00000544750 HLA-DQA1P01909 254 aa8.14□□□□□ -1.11
USP28-212ENST00000544750 ODF1Q14990 250 aa8.14□□□□□ -1.11
USP28-212ENST00000544750 KCNIP4Q6PIL6 250 aa8.14□□□□□ -1.11
USP28-212ENST00000544750 RASL11AQ6T310 242 aa8.14□□□□□ -1.11
USP28-212ENST00000544750 C15orf54Q8N8G6 183 aa8.14□□□□□ -1.11
USP28-212ENST00000544750 TSKUQ8WUA8 353 aa8.14□□□□□ -1.11
USP28-212ENST00000544750 GFRA4Q9GZZ7 299 aa8.14□□□□□ -1.11
USP28-212ENST00000544750 NAT8Q9UHE5 227 aa8.14□□□□□ -1.11
USP28-212ENST00000544750 HIGD1CA8MV81 97 aa8.13□□□□□ -1.11
USP28-212ENST00000544750 CRPP02741 224 aa8.13□□□□□ -1.11
USP28-212ENST00000544750 IFITM2Q01629 132 aa8.13□□□□□ -1.11
USP28-212ENST00000544750 MIAQ16674 131 aa8.13□□□□□ -1.11
USP28-212ENST00000544750 GATD1Q8NB37 220 aa8.13□□□□□ -1.11
USP28-212ENST00000544750 LINC01600Q96MT4 127 aa8.13□□□□□ -1.11
USP28-212ENST00000544750 PRR34Q9NV39 138 aa8.13□□□□□ -1.11
USP28-212ENST00000544750 TRAV26-2A0A0B4J265 109 aa8.12□□□□□ -1.11
USP28-212ENST00000544750 FAM231BA6NCW3 169 aa8.12□□□□□ -1.11
USP28-212ENST00000544750 TMEM262E9PQX1 116 aa8.12□□□□□ -1.11
USP28-212ENST00000544750 H7C1H1 209 aa8.12□□□□□ -1.11
USP28-212ENST00000544750 CNBPP62633 177 aaKnown RBP8.12□□□□□ -1.11
USP28-212ENST00000544750 ADIRFQ15847 76 aa8.12□□□□□ -1.11
USP28-212ENST00000544750 A0A087WYN8 130 aa8.11□□□□□ -1.11
USP28-212ENST00000544750 ANGP03950 147 aaKnown RBP8.11□□□□□ -1.11
USP28-212ENST00000544750 NIT2Q9NQR4 276 aa8.11□□□□□ -1.11
USP28-212ENST00000544750 LPAP08519 4548 aa8.11□□□□□ -1.11
USP28-212ENST00000544750 A0A1B0GUT8 65 aa8.1□□□□□ -1.11
USP28-212ENST00000544750 IQCJQ1A5X6 159 aa8.1□□□□□ -1.11
USP28-212ENST00000544750 CLLU1Q5K131 121 aa8.1□□□□□ -1.11
USP28-212ENST00000544750 CLRN3Q8NCR9 226 aa8.1□□□□□ -1.11
USP28-212ENST00000544750 NUP35Q8NFH5 326 aa8.1□□□□□ -1.11
USP28-212ENST00000544750 RPL39LQ96EH5 51 aaKnown RBP8.1□□□□□ -1.11
USP28-212ENST00000544750 RNF185Q96GF1 192 aa8.1□□□□□ -1.11
USP28-212ENST00000544750 GAS8-AS1O95177 125 aa8.09□□□□□ -1.11
USP28-212ENST00000544750 SLPIP03973 132 aa8.09□□□□□ -1.11
USP28-212ENST00000544750 TMEM97Q5BJF2 176 aa8.09□□□□□ -1.11
USP28-212ENST00000544750 SPACA4Q8TDM5 124 aa8.09□□□□□ -1.11
USP28-212ENST00000544750 TRBV25-1A0A075B6N4 114 aa8.08□□□□□ -1.12
USP28-212ENST00000544750 SMIM27A0A1W2PRY6 76 aa8.08□□□□□ -1.12
USP28-212ENST00000544750 PHOX2AO14813 284 aa8.08□□□□□ -1.12
USP28-212ENST00000544750 CHTF8P0CG12 524 aa8.08□□□□□ -1.12
USP28-212ENST00000544750 KRTAP10-8P60410 259 aa8.08□□□□□ -1.12
USP28-212ENST00000544750 RAB14P61106 215 aa8.08□□□□□ -1.12
USP28-212ENST00000544750 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.08□□□□□ -1.12
USP28-212ENST00000544750 CHCHD5Q9BSY4 110 aa8.08□□□□□ -1.12
USP28-212ENST00000544750 TMEM191AQ9H0A3 160 aa8.08□□□□□ -1.12
USP28-212ENST00000544750 PLAC8Q9NZF1 115 aa8.08□□□□□ -1.12
USP28-212ENST00000544750 IGHV1-24A0A0C4DH33 117 aa8.07□□□□□ -1.12
USP28-212ENST00000544750 PKIAP61925 76 aa8.07□□□□□ -1.12
USP28-212ENST00000544750 GAGE6Q13070 117 aa8.07□□□□□ -1.12
USP28-212ENST00000544750 SMIM15Q7Z3B0 74 aa8.07□□□□□ -1.12
USP28-212ENST00000544750 BORCS7Q96B45 105 aa8.07□□□□□ -1.12
USP28-212ENST00000544750 NAT8BQ9UHF3 227 aa8.07□□□□□ -1.12
USP28-212ENST00000544750 A0A0J9YXV3 536 aa8.06□□□□□ -1.12
USP28-212ENST00000544750 RAB4AP20338 218 aa8.06□□□□□ -1.12
USP28-212ENST00000544750 RPS10P46783 165 aaKnown RBP8.06□□□□□ -1.12
USP28-212ENST00000544750 RBX1P62877 108 aa8.06□□□□□ -1.12
USP28-212ENST00000544750 CLPSL2Q6UWE3 100 aa8.06□□□□□ -1.12
USP28-212ENST00000544750 AMN1Q8IY45 258 aa8.06□□□□□ -1.12
USP28-212ENST00000544750 LINC00269Q8N2A0 174 aa8.06□□□□□ -1.12
USP28-212ENST00000544750 IGHV3-64A0A075B6Q5 118 aa8.05□□□□□ -1.12
USP28-212ENST00000544750 TRBV6-5A0A0K0K1A5 114 aa8.05□□□□□ -1.12
USP28-212ENST00000544750 RIGQ13278 110 aa8.05□□□□□ -1.12
USP28-212ENST00000544750 TMEM243Q9BU79 118 aa8.05□□□□□ -1.12
USP28-212ENST00000544750 IGLV4-60A0A075B6I1 120 aa8.04□□□□□ -1.12
USP28-212ENST00000544750 hDV102S1A0JD36 115 aa8.04□□□□□ -1.12
USP28-212ENST00000544750 SDHAF1A6NFY7 115 aa8.04□□□□□ -1.12
USP28-212ENST00000544750 COTL1Q14019 142 aa8.04□□□□□ -1.12
USP28-212ENST00000544750 C20orf203Q8NBC4 194 aa8.04□□□□□ -1.12
USP28-212ENST00000544750 IGLV10-54A0A075B6I4 117 aa8.03□□□□□ -1.12
USP28-212ENST00000544750 A0A1B0GXF2 115 aa8.03□□□□□ -1.12
USP28-212ENST00000544750 SMKR1H3BMG3 65 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms